BtaINT0001042 @ bosTau6
Intron Retention
Description
Bos taurus TBC1 domain family, member 24 (TBC1D24), mRNA. [Source:RefSeq mRNA;Acc:NM_001046296]
Coordinates
chr25:1981117-1997717:+
Coord C1 exon
chr25:1981117-1981142
Coord A exon
chr25:1981143-1997593
Coord C2 exon
chr25:1997594-1997717
Length
16451 bp
Sequences
Splice sites
5' ss Seq
AGGGTAGGT
5' ss Score
8.1
3' ss Seq
CTTGCTTTTTCTGTTTTCAGATA
3' ss Score
11.86
Exon sequences
Seq C1 exon
GGGCTCGCGGCCGGCGCCGCAGGAGG
Seq A exon
GTAGGTAGGTGCGCGGCGGGGCCGGCGGGCAGGCGGGCGCGGGGGCCGTGGGGGTGGGGGGTCGGCTGTCACCGCGGCCCGGGCGTGCTGACCGAGGAACGCGGGGGCCGGCCGCGACGCGGGTTGGGGGTCCGGGGCCCGCGGCCGGCGCTGCCCACTGCCCCCAGCGCCCGGCGGGGCGCGACGTGGGGCCGGAGCGGTCCTGGGCCCTGCGCGGGACCCCCATCTCGGCGCTGTCGGTCCGGCGGGCGGCTCAGGCGAGGCGGCGGTGGGAATGAGCTGGCTCCGGGGTACTCCTTCCTCGGGTGCTTTTCGGGCTCTGTGGGGTGGGGAGTTCTCTTCTGGATTCGAAACTGTAACAGATTGTGTGATAACGCTCTGTCTTGGAAGACCTGCAAACTGCTCCCGTCCCGACCCTCCCCCGCTTGCTCCAGGTTGGCACCCCGCCCGCCTGCAGCCTAGGTATCTACGCAGCCTCTGAGCCCTGCCCGGCGGGTCTGGGGTGACTTGTACCCTCGGGTGGCCGCTGGGCTGTGCTGGGGACAGAAGCGTTTCCACAGGGCTCCTGAGCACTGTACTCCTCAGCCTTGAGAAAGCACACCTGGGAGTTGGGGATGGGCCTGGGGAGGTCAAGGTCCTCTCCTAGGAAGGGTGTTGGTGCCCTGATGGCCTTACTCGGTAGGGGACACTTACTCGGTAGGAAGCACTGGGCCTCCTAAATCACCGCCTGCTGGGCTGACACTAAAGGCCAGAGGCAGTGTGAGCACCCACTGGGCTAGGTGGTGGCGTGGGTTGACTGTTAGGATAGAGGTGTGCCTGGGAGGCACAGTCCCCACCTCATGTGGCTGTTGCTGTGATGCTGATCTTGAGATCTTTGGCCAGCTGCTTATTCCTAGTGAGGAGTCTGTCTGTCTGCCTTTCCAGGGCCAGTAGAAGCATTTGCAAGTGATTTTTCTTATTTCTCTGTATGTTTGCTCTGACGTCAGCAGGAACTTGTAGACAATTACAGGAGGGGAAAAAAAAATTCCACTATTGGCAGGAATACTGGTTTACCCTACTTAAACGTGGGGGCTCCCCTCCATCTTCTTGCCCCAGCACATAGTAGCCTCCTCTAAGCATTTACTTAATAGTCTTGAAGACAGGTGTGCTGGTTCTTTCCTTTTTAAGGGATCAGGGCCGGGAGAAACAAACCAAGGTAGGAAAAGATCAAGAACTCTCGCAAAGGCATTACAGTTACCATTTCTAACAGTGCTATAACCCACAACATGTGCTTTCTCTATCCTGAAGGTTGTTCGTCATTTAATCTTCTCAGCCCTTAGCTAAAGCCTGTAGAAGCAGGGCTTATTCAGGAGCCAGCGCTTTGTTTAGAAACCTGTCTCTCCCTGTGAGCAGAGCTGGGCGAAGTCACAGTCGTCTCTGCTCCCCTATTGCCTCACAGAGAATGCTGAAATGAACTAGGTGCTGAAACGAGTGCAGTAGTTTTTGTCTGGTGAACGGTGACCTTCAGGGCACGTAGAAGTAATCTAGTTATCTAGGCAGGCTTTTCATAATGACAACAGGATTCACCGCCTGGATTTGCAAGTTCACCTGCAGGTGAGCTGTGCTAGCTGTCACTGGCCACACCTGCCAGGACTGTCCAGCCAGCCAAGTGACCTTGGGCACACCATGTTGCTCCCAAGTCTCGTTGCAGTCTGAGCCGATCTCAGAAGACATATTTAAGTGTTTCCTTTTAGATGGTTTCTGGTTTGAAGTACATAAGGACAATAAGCAGGTTATAAAAAAGCACTTAACATTTACCCTGTTCAATGTTTTACCTGTTTGAGCATACCTTCTCTGTTATGACAACTCTGTGCAGGGAAGAAAGAGAGCCTTTTCACCTCGAAGCAGCAGTTTCAGTGGCTGTTTCAAGTGTCACTTTCCAAATGGAGATAATATCAAAGAAGCGGTACCTTGGGCTTTTCACTAAAGACCAACCTAAATTCATTATTTGATGATTTTCGTTGTTCTTTAAACACAAATTTATCCAAGTCATACTTCACGTGATGAGGACTTGTGCCCCGTGCTCTGCAGCTACAGAGTTGAGTGAGCCTGTGCCCTAGAGGAGATGAGGGTGCAGTGAGGAGACAGGTCAGCGAGCTGTGGCATAGCAGGCAGCACTCCCACTGAGGTGGGCTGAGCTTGCTGTGGGCACAGAGGGGTGGATCCAGCTCGCCCTTGGTGGTGGCTCCTGAGAAGCACTTAAATTAAATTTTGAACATCAGGGAATTTCCTGGCTGTCCAGTGGTTAGAACTTTGTGCTGTCACTGCCAAGGGCACAGATTCAGTCCCTGGTCAGGGAACTAAGATCCCACAAGTCATGTGGGATTCTTTTTAAGAACAGCCACGTAAAGGAGAGACTTCTTGGCTAAGGGACAGTGTGTGAAGTACCAGGGCAGTCTCCCAGCTGTTGGAAGAAGGGCAATGGGTAGCATTGGTGTTTGGAGTGAGGAGAGGGAGATGGAGTTAGGGAGCTAAGCTAGTGGCTGTCAGGAGAGCCATGAGTACCAGTCTCCAGTTTGCATTTTGCCCTGAAAGCGGTGGGGAGCCACTCAGGGATCTTGGGTTTGTGAGTGACTGGTCAGATTGTGCCCTCATGTGTGACTTGGGGTGGGTTGGTGCAAGGCTGCACTGAGTCGGGATGGTTAACAGAACACCGGAAGGCCCAGCACCAAGGAAAGCCAGTGGGAACAAAAGAAAGAGCAAGACCACAAGACAGGTGCCCGCGGGGACGGGAAGGGCCAGGGGTGGAGGAGAACTTCGGGAACACTCCGAGGCTGGGTGACTTGGCAGGGCTGGGCTGCGCTGTGTGCTGGAAGGGACAGGCCTGGAGTGGGTGACGACAGGTGGTGTGGAGAGGCTGAGCTGAGTCCTTAACAACTCCTTGATAGAGACTGCTCTGGAGCTGTGAGAGCTCCTTCCTATGTGGGCACTGAAGCCAGGGTATGGGGTGTGCCCTTCCAGGAGTGTGTGTGGAGTGAGAGAAAGAAGACTGACCCTGGAGAGGCCTGATGCTTCACATCCATAGGACAGAGTAGATAAGGTAACAAAAATCTGATTGATTACCTCCTGCCTTTTAAGGGGATGGGGGCAGGATAGTGGGCTTCTTATATTTGTCACAGAGCCTCAGGTTGTTGGTTAAACAGCAAAATGTAAGATACCAAAGGTGCAAAATCACATAATTGATTCCCAGGGCCTTCCTATCAAATGTGTTTGTTTGCCTTTTGAGAAAGTTCCAGATTGTCACTCATCTCAAAGGACCTCATTCTCCAGCCTGAGGGTTGGTCCTCTCAGCGAGTTCTCACCACTAGATCTCTGGAAAGAGACCTTCTCAGATCTAGAGAGAGATCTGAGAACTCTGTGGGTCCTCTCGCTCTCCTCCCGGGACCCGTTTCTGTGTAGTGCCTCAGCGTTAGAGACGGCAGGACTTTAGAAGGACTGTTGAGGATACAGAGGCCAAGTGTGTAGTGCTTCCTCCCAGGCTTGTCCCCACGCCGAGGGGCCGCCGGGAGAGGATAAGGAAAGGCTGGCGTTGCACAAGGAGTTCCTGTTTGCCCACAGGAGGCACGGGGCCCCACAAGGCTGTCTGGTCTCTCGAGTGCTGTTAGCAGTGACCTTCGCCCCTTTCGGAGCCTGCTCACGGAGGGGCACAGGAGACAAGCTCTCCTTCTGTCCTGTGCAGTCCCGGTCTCCTGCCTGGCTCTTGGACCTTAGCCATCTCCACTGGATATTGCCGACGGAGCTGCTGGCAGGGGTCATGCGTGAGCGGTCATGCTTTCTTCCTCCAGCCCGCCCAGGCTGTGCTCTCCTCTTACAGGCCATTGAGAAGCCACTATACAAGGCTTGGCCTGTTTCACATAACCTGAAACTGTGTGTCCACCTAATTGTTACACAATTTTAATTGGATACCAATTGTTTGCTGATGGGAGATTCTGTTACCAATAAAAGCCCTCTCGCTGCTTAGATGAAGCTCAGTTACCTGATTCCCACCAAGAGCTCTTCTGGCTTCTGTCCCTTCAGCCTTCCCTTGAATCCGTTTGTCCTCATTCCCTGATTACCCTCTGTAATTCCTTTCTCGGCAGGCATGGTTCCCGCCTTCCTGTCTTCCTAAACTTGTGGGCCTTAGAGGGAGCCTTAGGTGTGTGTTCACTCCGCCTGCCTCTGCTTTCTTTCCCTGCCTCCCTGGGTCGTCTCCTCCCCCACCTCCCAGCACACAGGCACGCACTCCTTTCTCGGTAGCCCGGTGAACCCAGACCCTGTGGCTTCTTGGAGCCGATGAAGCTGGACCGTAGAAGTGTCTTTGAATATGAGCCATGAATGACACTCACTGGCCCCAAGCAGCTGTGCTCTCCAGGGCTGTTTCTGCTGCTTCCTGGGTGCATGCCGCCTCAGCCTTCAGGATCTAGGCCAGGCGGGTGCTGGCGGGGCAAGGCTCCCAGGCCCCTCTTTCCTCGTGGGCTGGGGGCCCAGACACCCTGTGCTTCTCCCTCACAGCATCCGCACCTGAGTTGGTAGGGTCAGTACATCATGTCCCCGCATCCTGAAGCTTGCTGAGCAAAGGGGTGGCCTTGCATCCTCGTGTTCCAGCACTCAGCACAGTGGCATTCAGAAAGCGTCTCGAATGCCTGTTGAAATGATTCAGCCTGCAAGATTCCCTCCCAGCCCACTCTGCAGTCACGCCTGAAGATGCTTGCCGAGAGCCTGCTATGTGCCAGCCTTCGGAGGCACGCCTGTCACCCGTGCCTTGCTTGGAATTCAGACCAGTCAGGATTCTAGCTTCTGACAGCTGGGCTTCCTTCTCCTGCTTCTCATTCTGTGCAGCTAGTTGGATTCTCCTGTGCCCTTGGGGGGTGTTTTCCCAGACCTACTGCTGGGAGGACCTTTTAAACTCAGAAGATAAAGATCCTGAATTAGCGGAGCCCCATTGCAATCCCAGCCTCCGTCTGTGGGTAGACCAAACCAGCAGCTTGCTTGAAGAAAATTAGTTCCTCAACTAGGGATCAGACCTGGGTCAGGGCATTGAAAGCACCGAGTCTCAATCACTGGACCGCTAGGGAATTCCCTGCAGGGAACCTTTTTGAGTGGCTAATACCGTTAGGACTTCACCCCTCTCAGGTCCCATCCATAGGCCCAGGTGCCACCACTAAGATCTGCATTTGAACTTGCGACGTACTAGCAGAAAAGCTGGCCTGCGGTGCTGTGACTAATACCTCCTCGGTGGTTACACCCCTTTATGCCTGGCACGTGCCCTCCATTGTGTGCTGTCAGCCAAGGGCCCCCTATCGGGTTCCCGGTAACTGGCACTGTGGAATGCCAGTTGCCACTAGTATTTGAAAAATGCCCCGTGCTGCTTCAGGGCTGAGGCAGAACCCAGCCTGCCATCTCATTGCATGAGGATGCCTGCTGGGAAGCACACATACCTAGAACAGACAAGTTGCTGAATGGCCCCTGTGGTTTAGAGTTAAATTTCCTTCTCGGGCCCAAGTGGTCTGGGATTTTCCTGAGTCTCCGTCTGTTTCCTTCTCTATTTCCTCCTCCTTGGGTGCACCGAGTGTGTGATGTGAGACGCCTGGCTCCAAGTCCCAGTAGGGTAGAAGAGCTGCACTCATAAGCAGGTCATCACAGGTGTGCCAAGTTCAAACAGATTTGGAGAAGGAGGCGGGGAGGTCAGCCCTGCCTGCAGGGTCAGGAGTCTGGAAGGGCCGGTGAAGGAGGGAGCATTTGAAGCACATTCGCCTGAGAGGAGAATGAAGAACCAGCGTGTCCCACCTTTCCCCCTTCCCATTGTCAAGACTCCTGAAGCCACCATTGGAGGGCAGGTAGGGCCAAATGCCTAAGCGGTCAGGGCCAGTGGACGGGAGAGGGTTTCAAGGGGAGAGCAGGCCATAGCTGTTTGGGAGTCAGAGCTAGCTGCCTTTTGCGGGGAGTGTGTGAAGGCTAGGAGGTTTCAGCAAAACACTTGGAGGTATGGGACCTAAGAAATCTAGGCTTAGAAGAGGATGGACGTGCCTGCTCAGTCATGTCTGACTCTTTGCGACCCCAGGGACTGTAGCCCACCAGGCTCCTCTGTCCATGGGGTTTTCCAGGCAAGAAGACTAGTGGGTTGCCATTTCCTCCTTGAGGCGGTCTTCCTGACCCAGGGATCAAACCTGAGTCTTCTTCATTGCAAGTGGATTCTTTACCACTGGGCCCTCAGGGAAGCCGGGAAGAGGATGGACTTCTGCAAAAGGAACATTTGAGGAACAGGAGCAGTGGCTGCCAGAGAGAGGAGGAGACGGATGAGAGGGAGGGGTTTTGGAGGCCTGGGGGAAGGAGAGCTGAGCGCTGAGAGCAGTGGGGTCAGCTGTGTGCGTCAGAGAGATAAGAACTCAGAGTTGTCTGTTAGGTCTGGCAGCTCGCAGTAAAGCCATCGAGGGCTTGACAGGGGAGAAAAGAAAGAGGACAGGCTTAGCTCAAGGGGAGTTTCAGATGCTGTGGTTGGGGTTGAGGGCCTGGCTAACCAGAGAGGGAGCATTACAGATGCAGGAGAGTCGGAGTCCTAAGAGTTGAGATCCAGAACCAAGGGTGGGGGTTGCAGATCAAGGGCCAGGGTCAGACAGGAGTCGGTGCTCTGGCCTGACACCCAGTTCTCGAGGAGAGCGGGAGGTGTGAACCTGTCAGCTGCCGTGGGGCTAGGAGAGGGTGCCTGGAGGCAAGTGAAGGGCTTCCAGGCATCTCCGGGGCCCTCGAGTGGGGTGGTGTGACTTTGCCTCTGTGGTTGGTGTGCGAGTGTAGGGAAGCGTGCCGTCAGGCTGGCTTCTCACGGGGATTCTGCCAAGTAGCTGAAACTGGAGCCCGTGAGTGATGGAGCGGAGGTTTGGAGGGTCGGGTCAGGCCGAGCAGACAAGGGAGTAAACCCCAAAGGGCTCGTGGGGAGGGCAGATGGACTTGTGGCAAGTGGGAGTGGGGAAGCGAAGCGCTCCAGGGCAGTCAGCATGTTTGTGGTGTGTGCCCAGGATGAAGAGCCCCTGGGGCCGGCAAGGCTGCAGACGAAGCACCAGAGATGTAAAGGCTTCTAAAGCTGGGGAGGGATTTTTTTTTTTAATAGGTAAGAGGTGGATTTATTTAGAGAGAAACACTCCACAGACTGTGTGGGCCAACTCAGAAAGCGAGAACAGCACCGGGATATGGGGCTGTCGGTTTTCAGAGGGGTGGGTAATTTCATGGGCTGGTGAGTGGGAGGAGTGTTAGTGTGGGGGTTTTGAGGTTGTGCCCTGCCCCTTCCCTCCTGTCTTTACCCTCTCAGAGATTTTACTCCCATATTCTCACGGGAAACAGAGGGGCAGTGGTCTGCCTTGTGTAACTGCTTCAAGGTTGATCAGAGGCATCGACTCTGCCTTTGAAGGTGTAAAAATCTGTGGATGCCTGATCTTGGGGCCTCAGGGGCAGGACAGCTCCTTGTTTTAAGTCGATGTGGACTGGAATGCTCACATAGCCATCATCTTGATGTGAAGTTGTTGTAACTGCTTCCATAGCAGCCTTTCTGTGAACCTCCTTGATGAAACTGTAAGAACTCTCAGCTGTGGTGTGTGGAATCTAGTTCCCTGACCAGGGATCAAACTCAGGGCCCCTGCATTGGGAGATGGAGTTTTAGCCACTGGACCACCAGGAAGGTCCTCTCCTTCAGTCTTCTGACTAAAACCATCAATAGCCAGGAGGACCACGTCACTCTCTGGCATCTGGGGTATTCCCTCTTCCAATGCCCTGGCTCTTTGCAAAGGACACATACATTGCAGTCCTCCCTTAGTGCCCTTTCTGTCTGCACAGGGTACCCTGGTCTTGTCTGGGTGCCCCTGCACCTAGTGGCCCACCAGAAAAGCCGATTCCCCTTTGGTAGTCCCTGAGGGGACAAAATCAGTAGCGTCATTTGGGCCTTTTGCATATTTCTGTGGGTATCTTCAGCCTTTGCAGACAACTTCCTGTTACTGAAAACTGAGTAAGCCAGTTGAAACAAATAATTCATTGGAGCCTGATGACCAGCAGATGCTTTCTGAATTTTGTGCCTGATGTCTAGGGTAGACTGGGCTATGAAGTGCTTAGTCAAAAGGGCGTGTCCCTCCAGAGAGGAGGATTCTCATTCGTGTGTTTCCTGAAAGCCTCCACTAGTCTCCCTTCGAAGACCGCAGGCTTTTCATCCTGTCCCTGTTGAAGTTTTTAAACATTTTTATAATTAATAGATTTTACTGTAAGTTTCTTCCAACTGAAATTATATAACTCAGATTGGGACTTGAATCCACGTACTAGGACTGGAACCCAGTCAAAATCCACGGTTTTCCAGCCGAGATCACACACCTGGTTTTCTAGCCGAGATCGCACACCTGGTTTCAGAGCTTAGTGAAGCTCACTTGGTGTCTCATCACATAAAGAATTCAGTGAGAGACAGAGTGATAGGTAAGGAGTGATTTATTTAGAGAAAAACACTCTTATCACAGTGTAGGCTATCTCAGAAGGTGAGAGGGGCCTCGGAATATGGTTTGGTTAGCTTTTATGGACTGGGTAATTTCACAGGCTAATGAGTGGGAGGATTCTTTTAGCAATTTGGGGAAAGGGTGGGGATCCCCAGGAGTTGGGCCAGCACCCACTTTTTGGCCTTTGGGTCACCCTTGGAGCTGTCAGTGCCTGTGGGCGTGTCCTTTAGCGTGCTTGATATGTTGCGGTCAGTCACATGGCCATCTGTCTCTGTCAGTGGCATTCACAAGGTAATTCCGTTGTGGGTTGCCTCAGAGATGGCCTCGTACACCACTCAGTGCACTGCATGGTCCCATTGTGGGAGTCAGTAAAATGTCCTCTGTGTTTTTCCTAGAGTCATCCCTCCGAGCTAGACATGCCTTAAATTCCTTTTGGGTTCCACTGCCTAGATACAGAGTCATGAAAATTTGAATATAGGGTACTTTTAAAAATTCCTGTTGTCTGAATCTTTCCCAACCCTGGAGTATATGGCCCAGAGGGATATTAGCCAGATTAACGCAACCCTTTCTAGACCCAAGCCCGAGGTGATGTGTCTAGCTGCTCAGTCTGATCAAGATTTGCACCTAGATCATAGATGCTATCCCTCCCAAAGCAGTCTTCAACCAGGCACCAGCGCCTGAAAAGTTGTTGCAAAAGGACAGCACAGAAGGTGTCCCCAGCGGCGTTGACAATGAGCAGGAGTTGCTCAGTTCAAAGGGTCAGCACTTGTCAGTAAGAAGTCCGTCTTGGCAGTTACACAGGTCTTCTGGGGTTAAGAGAAGCAAGATATAAAACAGGAGTAAATGTAGAACGTAGGAGACTAAACGTCAGAGTCAAGGAACAGAGTCTGGAGTATCAAATCCTGCCTCAACAGGCCTGTCCTGGCCCTGTGGTCGGACGCGCCTGAGCATAGCCATTCCACACCACCTTCCTACAGCAGACCAGGCCGACGGCTGCCATCCTTCTGGTCCAGAGCTAGGTTCCTGATCAGAGCCCCAAAGCATTTGGGGTTGACAGGCCTGACAGAAGCAGGCAGACATTGCTGGAGCGTCCTCCCCGGTACGCCTGGCTCGGGCATCCCACAGGCCTGTCTCGGACCAAGACCTAACTCTCAACGTTTTCTTACCTTATCACTGTCCCTTCATGGCGCTTGAGATCACACACCTGGGTCTTAGGACTTACTGAAGCTCAGGTTCTTGATGTCTCATCGCAGAAAGAATTCAATGAGAGACAAGAAGTGGGTTTATTTAGAGAGAAACACCACAGACAGAGTGTAGGCCAGCTCAGAAAGAGAGCAGCTGAAGCTGGGGAGCTTTGAGCCAGGCCAGCTTGCTTGACCTTTGATGGCCTGTAGTGAGGCAGCTGAGAGAAGGGGGCCAAGAACCGGAATGAAGTGGGTGGTGGGTGGGGAGACCCTGGAGAGAGGCAGGCAGGGCCCCTGCTCTCTGGCCTGGAGGAAGGGTGCATTAAGGGAGAGGGTGGGGTGGGGGGCTATTTCCCACAAACAGGCTCCAGAGCAAGAAGAGAGCTGGAGCTCGGGCGAGGGTGGTAAAGCAGGGCAGCGAGGGAAGCGAATGCGGCATGTCAGGCTGTGGTCGGTGGCCCTGTCACCCCGTCCGCCAGCCGCCAGCGGCCGGGGCGGGGGGCGGGCAGGCATCTGACTGCTGAGGCCTTGGGCCGGGAGGGGAGTGCCCTCCTGCCCCATCCCTGACAGTCCCGAGGCTGTGTCGCCGAGGCCTCGGGAGTGGGCTTGAGCGTTTCCCTGGTGTCCGCCTGTGGGTGGCTGGGCACCCCAGGCCTGCCGTGAGGAGGCCAGGCTTAGGCAGACTTGGCCCACATCCTGCTCCAGACCTGCCGCGCCCAGGCCCCCCTCACCTCCCCTCTGGCTGTCCTAGTGGAGGCCGAGGGATAACGCCCACCATTCCCCCCTTCTCTGCCTCAGAGCGCCTCCCACTCTTCCCTATTCACCGGTCCAGACGCCCTGGGCCGTGCCCCCTGCCCTGCTCCTCTACCCAAGCACCCTGAGCGCAGAGCCGCACACCCGACCCCCCAGCGCATGTCATCTGCCCTTCCCTGTCCTGCCGCCACGTTCCTGCCTGGCCCCCTGCGTATCTTCTTTTCAGGCAGTGACTGGTCCTGTGTCTTTCTCACCCACGCTCCACACACCTTAAGGGCTGGAGTGGGGCCACCAGGTGTCAGGGACCCGTCGCCCTGCCTGCCCTCGCTGGGGACACTGCCCGAGAGGCGCTGCTCTCTTGGTCACGCGGGACTCCCCGGGCCCGGGACCGCTTGCCTCGCTGCCCGCCTCCCTGTCTGCCACCCCATCCTTGGTCTGCGGTCTGCAGGGCTGGACCCAGCCTCCTTCCTCTTCCTTCTCTGTTTCCTGACCGCACTTCCAGGAAACAGGCGGGGAGTGTCCCGCGAGGAGGGAACAACTGAGACAGCCTCGCCACCGGCTGTCCTGTGGCGCAGTGACTAAGGCCCGGCCAGGCTGAGCACCGGGAGCTCAGACCTGAGCTGTTCCTGCTGCCAGGACGGGCGCAGGGCCTGGGTGGGCGGGCTGGGCAGGGGTCAGCGGGACTGGGCAGCGTCCAAGCCCCCCTCCCTCTGCGCAAGGCTGTCTCCTGCCAGCTGGGCCACAGTCAGCTCCTCGGGGGGCTCTGGGTATGTGGAGGGGCCGTGTGCGAAGCCCATGGGGTGACAGAGGAGTCCAGGGGCCAGTGTGGGGGTGAGGGCTGACGGCTGGGTGTCTGGGCAGGGCCTCAGCACAGCAGCCCAACTTCTCCTCCAGCCTCAGCCCTTCACAGCCCCCCAGGGAGCGCCTCCTCCACCCCAGCCCTGGGCCAGCATTCTCTGTTCACTGCTGGGGCCTTTGTCCCCCACCCCAGCTCAGCGTGTCTGGTGGAGTCCACCCCCGACTTGTCCTGCCTCTGCTTCTGGACTCTGCCCTCTTTCCTCCTTGGCCACCAGGGTTTTCTCTGAAATGCCGATCTGATGTGTCACCTTCTGCCTTGGCTCTTCTGCTCCCTCGTGTGGGGATGACAGCTCCTGCCCCACCTCCCAGGAGCTCCCCCGTTTGCATTTGCCCCATCCCCATTGTCACACACCCTGGGGTCCTTATCCCTCTGGCACGCATGCAGAGTCCGTGCCCTGCTGGGTGGTCAGCGCCCTGCTGACCTCTCGTCTCACCGCGGGCGCTGTGACCATAGGTCTCCTGGAGAGCTGTCTCTTATGCTTGTGTCCCCGGGGCCCTGCCCAGAACAGGCAGCTACGGAGAAGTTTGTAAAACAAATAAAAGTTTGAGTCAAGGGGGCGGAAGGAGTGCTGGGCACTCCCAGAGAGGCAGTTTATAAGGGGGCAGAGCGCCTAGTGTGGTTTAGAATCTCCCCAGACTTAAAATAGGGGTCTGTTTGTCACTTGAAAGCGAGTTTTTTGTTTTTCAAATCCAGTTGTTTGGGAGAATCACATTCCCCACTTACATAGTGAGGCAGGCAGAAGTTTCATGTTTCATGACCCGTCCGACCACGGCTGGAGCCCCATGGCATGTGGAGCCAGGCCTGAGGACAGGGGCTGTGGGGCTGCCCCCTGGGTGAGCTGCGCTCCTGAGGGGGGCCTTCGAGCACACTTCAGGCTCTCTCTGGAAGCTGCTGGCTGGGTTCTGCCTGTGCAGGGCCCCCAGAGCCCTCTCTGCATCCGTTTCCTCACTGTGAAGTTACCTGCCGTGGGTTGAAGGAGACAGGGATGAGGTTGCATTGCCTGGCAGCCCACTGTGGAGTCTGTCCAATGGCCCTTAAATGGGGCAGGAGGGGGCCCCGTGCGCTCTGTCCTTCGTCCCATGACCACTTTCTCTCTCTGCCCCACTCCCTGTCTGGGGTCTACCAGGAGGGCAGCCCTGGCCCTGGAGCAGAGTCGCCGGGCACGGGACCCAGGGCGCCTCCCACCCACAGCCACCTCCCTCCTCCTGTGGGCACACTCAGGGGGCTCCCCAGGGAGGGCATAGCCAGGCTCCCGTGACTGCTCCTGGCTGGAGCATGGTCCCCAGAACCCCCTCCTCAGCAAAGCTGCCTGGCCCAGGGCCCGTGGGGCTGCCAGCTGAGCACTGCAGAGGGGGGCCTAACCCCCTGAGCAGAGGTCACTGAGTCCCACCGAATGCTTTATTTTTAACTTTTTAAGGTAGACTTGCTTTCCATTAGGAAGCCTGGACTCTGTTCCTGAGGGAAGGCATGACAGTGACTGGAGGGGCTTCCGGGTGGGAAAACGGCCACACCAGCGGGGAGGGGTGCCAGGCAGGGCCATTCAGAGGGACCCTCCCATCCGGAACAGAACAGGCGCCTCCCCGGGCCCTGGGGGAACCCTGCCTGCAGCCTCTGTGGCTGAGCCGCACTGGCCCTCCTGACCCCACCCCCAGAGCCCCTGAGCTGGGAGCCGGGGGAGCGGGGAGCGCTGCCCTGGCGTGCCAGGCGGGAGAGTGCCTTCAGGGAGCAGGCGCGGCTCATCCCTACGGCAGTCAGCTGTTAGTCTGGCTGCTGGGGCGCGTCCCTTCCCTGCCCACACTCGGGTAACTGGGACTCCTCCGCACCCCCACCCTGTGTCTCACTGTGCCCAGCGTACCGGACGCCCTCCCCTCCTCCAGCACCCCGGTCCCTTCCGCCTCGGGGCCTTTCCTCAGCTCCTCTGTCAGCTTCCGTCTCAGCACTTACGCTCGGATGGGGGAGACTCCCTGATGACTCCCCCTAAAGTGGCCACCACTCTCTGGACCGGCTGTGTGGCATCCCTACTGCCCGAAAGGACCACTGTCAGCTGTTCTTGTGAGTCCAACAGGAGGAAGTAGAGTGGAATTTTTCCTGTTTGCCCAGAATTGCATATTAGGCCCAAGCTCAGGGCAGAAACGCAGAGTTCCTTCCTGTGATCCAAGGCTGGGAGCCGTGGCCCCGGGCAGCCCTGCCCGCAGACTGATGGACAGGCACCCCCAGTGGCCTGCCCTGCCCCTCTGCAGTGAACTTGAGACTGGGGGTGGGGTGGCCCCAGGGCGAGTGCAGAGTTTGTGATTAGAATTCGTTCCCTCCCTCACCTTCCTGAGGCCAAGGGAAAGGTTTTCCAGGGCCCCTGCTGGCCAGGAAGAGTGGCCACCTGCCCCGGGCTGCCGCAGGGCTAGAGAGAGAGAGTGGGTTGTGCCTGTCCCCACGCCCGGCCAGCGCGCCAGGCGGAGAACTCGACCCACAGGCGCCGTGGGGGCTCAGGGCCCAAGCCAGGCTTGTGTTCTTGGGCTCTGTTTTAGAGACATCTGCGTTCAGGGAGGAGGTAAGGCTTTCCTGAGGCCAGCCCAGCCAGCGGCAGGGCAAACTCCAGCCCGGCCCAGTGGCTTCAGACTGGCTCGCTCCCTGCTGGAGCTCCAGCCAGCCTCTACGACTGCCCACCGGGTGAGGGTGGGAGCACGGCTGCCTTCCTGGGCCCGGCCCCTCTGTTGGGTGCTGGGCGCTGCGAGAGCAGGTGAGGCCTGCGTCCCTTGCGGGGCAGGTGGCGTGGACGGTGTGGGTGGTGTGGCCAGCCGCGGGAGGGACAGCTGGGGAGGCCGTGTGGCCCAGGTGAGGGTCCTGTCTGGTGACTGTGTCTGTTTCCTGGCTGCTGCCTCCCCCTCCCCTCAGCCAGCGTGTGCTGTGAACGCCTGCACTCCTGCGCGCAGGAAGCAGCTTCATGAACTCAGATGTGAGGGTGGTAGCCTTAGGGAGGAGAGGCAGTGGGATTGAGCGGTAGCTTAAGCAGGACTGTGCGTTTGTACTCTGTGATTTTATGTTAGTTGATGTTTTTGTGATTATGCATTCATGTAAAGACCAAACCAGACAAAAAGCTGCCCTGGGACCTGGCTTCATTGACCCCTCAGGAGGTCAGCACAACTTTGTTTGCCCTTCTCCAGAAATGCTCTTAGGTGGGAGGAGGCCTGCAGGGATCCAGAGAGTTCCTCTGGGCTCTTCTGCTCCTGTCTTTGCCTCGGAGTCCCTGGCCACTTGTTGCAACAAATAAAATTGTGGGGGGCTTCCCTGGTGGTCTAGTGGTTAGTGCTCAGGTGCTTCCACCACAGGGGGTGTCAGTTTGATTCCTGGTAGGGAACTAAGATCCAACATGCCATGTGGCACAGCCAAAAACAACAAGGAAACAAAACACAAAACGTTGGTCTGCTTCTCCCTGAAGGTCCTTTCTGAAGGAATTTACAAGGTACAATAACCGTTTTTAGAGTTTCCAGTTTAATATTCAACCTGAATCTTAGGGCAGCTGAGTGAGGTTTGGCACTGTCCTGCCCCGCTCTTGTTCTGTTTATAAACATGTTTATTGCCCTGACAAGGAGCAGGTTCTATTCAAGAAAACAGGATAGGCCTGGGGTCCCTCCAGAGGTTAGTGTGCTCGGAGCCTAGAGTGAAGGATGAGACTCTATAGGTAATTTGCAGCCTGGGGAAACGGGGGCCCCTAACTGCTGTCCTTCCCAGAATAGAGCAGACAGACTAGCTGCTATTTGGGGTTCTTTTCTGGGGAAGAAATTTCCAGCATTTGCGGCACCTGGTCTCGCTGCAGGCAAGGCTCTTCCAACGGGATGAGGTAAATGGATGTTGTCAACAAAACTTCATTTCTGTGGGAAAGTCCCTGTAAAGACATATATCCAGGGACTTGGACAGACACTCAGCCGTGTTCACAGCAGCATTACTCCCAACAGCCGGAAGGTAGGAACAACCCAGATGTCCATCGACAGACAAAGCATGTTTTGTGCATACAGTGGGATATTATCAGCCACAAGGAGGAATGAAGTTCTGATGTTGCAGGGGGCAGAGATGAACAGGTGGGGCTTTTTATGATACTATAATAAGGTTACATGTCATTTTACATGTGTCCAAACTCATAGAATGTATGACACCAAGAAGGAATCCTCTTTAATTCATAGATTCGGTGATGTGTCAGTTTAAGCTCATCAGTTGTAGCAAATGTCTCATCTGTGGGGAAGGTTAATAATGTTGAGGCTGTGCCTGCATGGACAGAGAGTATGTGAGACCTCTGTACTATCCTCTCAATTTTGCTGTGGACCTAAAACTGCTCTAAATAATAGTCTTGAGTTTTAAAATATATACTATACATGGGCTTCCCTGATAGCTCAGTTGGTACAGAATCTGCCTGCAATGCAGGAGACCCCAATTTGATTCCTGGGTTGGGAAGATCCGCTAGAGAAGGATAGGCTACCCACTCCAGTATTCTTGGGCTTCCCTTGTGGCCCAGGTGGTAAAGAATCCGCGTGGAACACGGAGACCTGGGTTCGATCCCTGGGTTGGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAGTTTCATGGGCTACAGTCCACGGGGTGGCAAAGAGCTGGATACGACTGAGTGACTCTCACGTTCACTATCGCATTCTCATCCATGCTGTCAACCCTGATAAACCTTGAGGACATTATGATCAGTGAAATAAGCCAGACACTAAAGGACAGATATTGTATGATTCTACTAATACTAGGTGCCCAAAGTGGTCGAATTCATAGAAAGCAGGGTGGTGGTTACCAGGGGCTGGAGGCTGGGAATTGGGAGTTGGTGTTTAATGGGTGCAGTTTCATTTGGAGAGATGAAAAAGTTCAGATATGATGCTGATGGTGGTGCAGCCTTGTGAATGTTCTTAATGCCACTGAACTGTACACTCACAAATGTTTAAAATGGTAACGTTTGTCATGTATATTTTTAACAATTAAACACAACAATACAATTCTGTAAAGCAATTATCCTTCAATAAAAAAGTTAAAAACCACCGCCATGTTAAGGTGCTTCCTCAAGACACACACAGATTTCACCTTACAGTTCTTTCCACTCAGTATTTCTAAAGTATTGCTTGCTTTTTCTGTTTTCAG
Seq C2 exon
ATAAATGTTCTTGATGCAAGCAAAACAGGAATGCTCTGATCATTTACCGAAGATCACCGAGGCAAACAAACCTTTGTGAGATCTCCAGACAGTGTACCATCCCAGGCAGAAAGGTTAGTCTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000005458:ENSBTAT00000007182:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Mouse
(mm10)
No conservation detected
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]