DmeEX0004382 @ dm6

Exon Skipping

Gene

Description

The gene Formin homology 2 domain containing is referred to in FlyBase by the symbol DmelFhos (CG42610, FBgn0266084). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (8 unique). Gene sequence location is 3L:8753619..8798719. Its molecular function is described by: actin filament binding. It is involved in the biological process described with 12 unique terms, many of which group under: anatomical structure morphogenesis; epithelium development; multicellular organismal process; positive regulation of cellular component movement; programmed cell death involved in cell development. 43 alleles are reported. The phenotypes of these alleles manifest in: intracellular non-membrane-bounded organelle; multicellular structure; intracellular organelle; cytoskeleton; intracellular. The phenotypic classes of alleles include: increased mortality during development; stress response defective; phenotype; fertile.

Coordinates

chr3L:8797000-8798719:+

Coord C1 exon

chr3L:8797000-8797226

Coord A exon

chr3L:8797690-8797821

Coord C2 exon

chr3L:8798121-8798719

Length

132 bp

Sequences

Splice sites

3' ss Seq

TGATATATTGACTATCGAAGTGA

3' ss Score

1.39

5' ss Seq

TTGGTTAGT

5' ss Score

4.82

Exon sequences

Seq C1 exon

AAAACTTTTGGACACATCGAGTGCCGACCAGGCCGATGGGACACTCACCTGGCGGAGGCGACGAGCGGAACAGCTCCGCTCACCAATTACCCGCCAAAGCGAGGAGCAGTTCACCGATGGCGACGATGAGATACTGGAATCTCTGGTTAAGACCGCCACCAAGGCTCCAGGAACACGGACAACGCCGAGGGAACGGAAACGGACGCGCCACGCGGATCGCAAATCAT

Seq A exon

TGAAGCGCAGCCGCACGCGCGAAGGATTCACAGTTGAAAGAGCACCATCGCCGTAGAAACCGTTACTGTTAACCGAATCCGTAACCGTTGCCAAAAGAACAGCCAACTGTTTTTTAGGTTTTACCTTTTTTG

Seq C2 exon

TACGTCGCACGCTGAAAAACGGTCTGACCGAGGAGGAGAAACAGCACGTGGCTGCCTTGATACAAACCTATTAGGATTAGGACAGACATATATCGTAGATACCCGCATCACATCCGAGATAATACCATCCCCCAGTGACGTCACAAGTCGGGCACTACGCGCACAGACTGAAATTGGCGATCTCAGGCGAGCAAGCGAACCCAGAAATTACCCTTTTATACGACAACGTGCGCATAGTTAGTACTGGTTTTTATTATTTTCTTTTTTGTCACGGCAAAAAAAATGAGTACCAACAACGGCAACAACGCTGCAACGAAAATGTCCTTAAACAAAAGCGTTTATCATCGTGTTTTTCTGTTATATAATTTTTGTTTTGCTTCTGCTAAGTATTATTAATTAAACGTAATTCAATAAACCTGTATTAGTAGTTGAAAACGATTTTAATGTTAGAATTTGGATCACATGAAATTTCGATATCCTTTACGACAACACTAAATTTG

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0266084_MULTIEX1-9/9=8-C2

Average complexity

S*

Mappability confidence:

89%=89=100%

Protein Impact

ORF disruption upon sequence inclusion

No structure available

Features