HsaALTA0009737-1/2 @ hg19

Alternative 3'ss

Gene

ENSG00000176293 | ZNF135

Description

zinc finger protein 135 [Source:HGNC Symbol;Acc:12919]

Coordinates

chr19:58574814-58578921:+

Coord C1 exon

chr19:58574814-58574909

Coord A exon

NA

Coord C2 exon

chr19:58578109-58578921

Length

0 bp

Sequences

Splice sites

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

3' ss Seq

CCAGTTTTTGCTTCTTTCAGACT

3' ss Score

7.91

Exon sequences

Seq C1 exon

GACATTGGTTACCGAAGCCGAATGTCATCTCCCTGCTGGAGCAAGAGGCAGAGCTGTGGGCGGTGGAGTCTAGACTTCCCCAAGGCGTGTACCCAG

Seq A exon

NA

Seq C2 exon

ACTTGGAAACTAGACCCAAAGTCAAACTGTCAGTTCTAAAGCAAGGCATCTCTGAAGAAATATCCAACAGTGTCATCTTGGTAGAAAGATTCCTGTGGGATGGTCTGTGGTACTGCAGGGGTGAGGACACTGAGGGCCACTGGGAATGGAGTTGTGAGAGTCTAGAGAGCCTGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGCCTGTTCTGGAGCAGTGGCAGAGGAATGGGTTTGGGGAAAACATAAGTCTGAACCCTGATCTCCCACATCAACCAATGACTCCTGAAAGACAAAGCCCCCACACATGGGGAACACGTGGAAAAAGGGAGAAGCCAGACCTAAATGTTTTACAGAAAACCTGTGTAAAAGAGAAACCCTACAAATGTCAGGAATGCGGAAAGGCCTTTAGTCACAGCTCAGCACTTATCGAACACCACCGGACGCACACAGGAGAGAGACCTTACGAATGTCACGAATGCTTAAAAGGCTTCCGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000176293-4-6,4-5-1/2

Average complexity

Alt3

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=NA C2=0.195

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSP00000321406