HsaALTD0007421-2/8 @ hg38

Alternative 5'ss

Gene

ENSG00000169740 | ZNF32

Description

zinc finger protein 32 [Source:HGNC Symbol;Acc:HGNC:13095]

Coordinates

chr10:43643859-43646202:-

Coord C1 exon

chr10:43646064-43646202

Coord A exon

chr10:43646060-43646063

Coord C2 exon

chr10:43643859-43644801

Length

4 bp

Sequences

Splice sites

5' ss Seq

TGAGTGAGT

5' ss Score

6.51

3' ss Seq

CTTCCCTCTCATTTTATCAGATG

3' ss Score

9.95

Exon sequences

Seq C1 exon

GTGCTCAGGAACAGCCCATGGAAGAATCATATGAAGAGGTGGTGACTGAGGTCGTAAGCAGGAGTGGACATGTTTGGATTTCCAACAGCTACCCTGCTGGACTGTCATGGAAGATATGCCCAGAATGTAGCGTTCTTCA

Seq A exon

GTGA

Seq C2 exon

ATGTGATGACTGAAGCCCACCACAAATATGACCACTCTGAGGCTACAGGATCCTCAAGCTGGGATATCCAAAATTCTTTCAGAAGAGAGAAGCTGGAACAAAAATCCCCAGATTCGAAGACACTACAGGAAGATTCACCTGGAGTGAGACAAAGGGTCTATGAGTGCCAGGAGTGTGGAAAATCCTTCCGGCAAAAAGGTAGTCTAACGTTACATGAGAGAATCCACACTGGTCAAAAGCCTTTTGAGTGCACCCACTGTGGAAAAAGCTTCAGGGCCAAAGGCAATCTTGTTACACATCAACGGATACACACGGGAGAGAAGCCTTATCAGTGCAAGGAGTGTGGGAAAAGCTTCAGTCAACGAGGTAGTCTCGCTGTCCACGAGAGACTCCACACTGGACAGAAACCCTACGAGTGTGCTATTTGTCAGAGAAGCTTCAGGAATCAGAGTAACCTTGCTGTTCACAGGAGAGTTCACAGTGGTGAGAAGCCCTATAGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000169740-6-6,7-6,8-6,9-6,10-6,11-6,12-6,13-6-2/8

Average complexity

Alt5

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (No Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=NA C2=0.152

Domain overlap (PFAM):

C1:

NO

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=10.0),PF079757=C1_4=WD(100=21.5),PF134651=zf-H2C2_2=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=10.4),PF0013017=C1_1=WD(100=25.9),PF134651=zf-H2C2_2=WD(100=10.4),PF0009621=zf-C2H2=WD(100=9.2)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSP00000363556