HsaEX0073277 @ hg19

Exon Skipping

Gene

ENSG00000198393 | ZNF26

Description

zinc finger protein 26 [Source:HGNC Symbol;Acc:13053]

Coordinates

chr12:133584023-133589153:+

Coord C1 exon

chr12:133584023-133584118

Coord A exon

chr12:133586722-133588438

Coord C2 exon

chr12:133588791-133589153

Length

1717 bp

Sequences

Splice sites

3' ss Seq

TTTTGTTTGTTTTTTTGTAGATG

3' ss Score

10.46

5' ss Seq

TTGGTATGA

5' ss Score

5.24

Exon sequences

Seq C1 exon

GGTATCATGGTACCAAGCCTGACTTAATCTTCAAGTTGGAACAAGGAGAAGATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAG

Seq A exon

ATGGCTGGGAAGAATGGTACCAGAACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAAGACTTAATCTGAGCAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAAAACTCAGCTCCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCTTAAGCATCAAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGTCACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCCTTCAGTGCCAAGTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTGAGTGCGAGAAGGTCTTCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACCCTATGGCTGCAGTGAATGTGGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCACACAGGAGTGAAACCGTATGAATGCAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTACACCAGAGAACTCATACAGGAGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTCCTATCTCCTTGTTCACATCCGAATGCATACAGGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCCTTCAATATGAAGACACAACTCATTGTACATCAGGGAGTTCACACAGGAAATAATCCTTATCAATGCGGTGAATGTGGGAAAGCCTTTGGTAGGAAGGAACAGCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAGCCCTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCAGCAAGTCATACCTTGTTATACATAGGAGAACACACACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGAGCCTTTTGTGGAAAATCACAGCTGATTATACATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGAATGTGAAAAAGCCTACCCTAGGAAGGCATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTAAATGCAGTGAATGTGGAAAAGCCTTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACCGGAGAGAAACCATGGAAATGCTCTGAATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCATAAATGAGAAATCAGAATGATGCAATGTGAGAAACTGATGTTCAGGAGACTTCGGATAATATAGACAGGATTTACAAGCAGGAGGCCCTAAAATTACACTCATGTCAAAAATCAGAGAGGAGAGAGACCAACCATATTTGGGATGAGTGTAAAAGCTTTCAGAAATAAGTTACAAATCTTTGTAGATGAAAATAATGGAAGGAATGTGGAGCAATAAATGTATCAAATGTTGTAGTATCATCATGAAGATTCAGAGAATTTACACTAGGAACACCTTATAAGTTGAATAAATTAAGGAAGCATTTTCCCATTGAAAGTGTGTTCCATGGAAAGTCACATTCCAGATTTGAAGCTGTGTTTTTGTAAAATAAAATCTTG

Seq C2 exon

TTCCATGCCTGTTGTCCATTGATTGACATGAGCACCCCTGTTTTCTCTGGAGAAATACCTCCCCTCTCTGGGGTGCTTCCTGTGGTAGTGTCTTTCAGGTATCCGTTCCACTAGCTACAGGTGAGCATTTTACCCATTGTTGGATAATGGTAATCTCTTTTTCAGAATTTTGAGTCTGTAATTCATTTGTACATGAACCAGAAAATGTGGGAACTCATTCATTCTTGTCCCAGAATTCTGTTGAGAACATCCATTCATTCTGGCTAATTGATTACAAGAATAACTGTGGATACGATCCCTTTAGAACCTGCTTCTCTGATCTGTGTGTTTCCTCACTTCTCAATAAAAATGTCTTTTGCTTTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198393_MULTIEX1-6/6=5-C2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.054 C2=0.054

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.3),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF079757=C1_4=WD(100=11.4),PF134651=zf-H2C2_2=WD(100=5.3)

C2:

NA

Main Inclusion Isoform:

ENSP00000437420