HsaEX0073851 @ hg19

Exon Skipping

Gene

ENSG00000175322 | ZNF519

Description

zinc finger protein 519 [Source:HGNC Symbol;Acc:30574]

Coordinates

chr18:14084876-14132429:-

Coord C1 exon

chr18:14132274-14132429

Coord A exon

chr18:14105033-14106408

Coord C2 exon

chr18:14084876-14085075

Length

1376 bp

Sequences

Splice sites

3' ss Seq

GTTATTTTTACTTCTTTCAGCTG

3' ss Score

7.67

5' ss Seq

CACCTTACT

5' ss Score

-17.39

Exon sequences

Seq C1 exon

CACTTCAGCCAGAGCGCGGGGTTAGGGCTTCATTGCCTTGTGTCCTCTGCTCCGGGAGACTTCGGTGATTCTGCCACTCACTCCGTCGCTCTGTGACCTGCTGGCATTGAATGATTTATAGCTAAGACTCCAGGACACCCCTGAAGCCGAGAAATG

Seq A exon

CTGTGTATTCTTATTACAACCAAGGCATTTTACCAGAGCAAGGCATACAAGATTCATTCAAAAAAGCAACACTGGGAAGATATGGGAGCTGTGGCCTTGAAAATATATGCTTATGGAAAAACTGGGAAAGTATAGGTGAAGGTGAAGGACAAAAGGAATGTTATAATCTATGTAGCCAATATTTGACAACTAGTCATAACAAACATTTAACTGTGAAAGGAGACAAAGAATATAGAATATTTCAGAAGAAGCCTCAGTTTCTGTCAGCTGCTCCTACAGAACCATGTATTCCTATGAATAAATATCAACATAAATTTTTGAAATCTGTCTTTTGTAATAAAAATCAGATAAATTTTAACCATGACTCAAATATTAGTAAACATCATAGTACTCATTTTCTAGAAAACTATTACAATTGTAATGAATGTGAAAAAGTATTTTACCAATCCTCAAAGCTTATTTTCCCTGAAAATATCCATATTCAAAAAAAGCCTTACAACTCTAATGAATGTGGTGAAACTTCTGACCCATTCTCAAAGCTTACTCAACATCAAAGAATTTATATTGGAGAGAGCTCACAAAGATGTAATAAAAAATGTATAATAGTCTTTAGTCAATCACATCTAAAGGGACATAAGATAATTAACACTGGAGAAAAATCAGTGAAATATAAAGAACGTGGCAAAGCTTTTACCAGGGGCTTACATCTTGGACATCAGAAAATTCATACTGGAGAGAAACCTTACAAATGTAAAAAATGTGACAAAGCCTTTAACAAGAGTTCACACCTTGCTCAACATCAGAGAATCCATACTGGAGAGAAGCCTTTCAAGTGTAAGGAATGTGGCAAAGCTTTTAACAGAGGCTCATACCTTACTCAACATCAGAGAATCCATACTGGAGAGAGAGCTTTCAAATGTGAAGAATGTGGCAAAGCCTTTAACAGGGGGTCATACCTTACTCAACACCAGAGAATCCATACCGGAGAGAAACCTTTCAGATGTAAGGAATGTGGCAAAGCCTTTAATAGAAGCTCATACGTTACTCAGCATCAGAGAATGCATACTGGAGAGAAACCTTTCAAGTGTAAGGAATGTGGCAAAGCTTTTAACAGAGCTTCACACCTTACTCAACATCAGAGAATCCATACTGGAGAGAAACACTTCAAATGTAAAGAATGTGGCAAAGCCTTTAACAGGGGCTCACACCTTACTCGACATCAAAGAATCCATACTGGAGAGAAGTCTTTCAAATGTGAAGAATGTGGCAAAGCTTTTATCTGGGGCTCACACCTTACTCAACATCAGAGAGTCCATACTGGAGAGAAATTCTTCAAATGTAAAGAATGTGGCAAAGCTTTTACCAGGAGCTCACAC

Seq C2 exon

TGGAAAAGCGAGATTGTCTTTGACCATTTGCTATGGACATTGTCAGGGATGGTGCAGCCTGAATGAGAATGTCTGCGGTATTTCCCGAAATAAGTATCCCTCAAGGATGATACTGTGGACCTCACTCAGGAAGAATGTGTCCTTCAGGGAAAGCTGCACAGAGACGTGATGCTGGAGAAGCAGTCATCTGGTTACTTTAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000175322_MULTIEX2-2/2=C1-C2

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.082 C2=NA

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2)

C2:

PF0135222=KRAB=PD(0.1=0.0)

Main Inclusion Isoform:

ENSP00000464872