HsaEX1011628 @ hg38
Exon Skipping
Gene
ENSG00000151240 | DIP2C
Description
disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
Coordinates
chr10:472439-478833:-
Coord C1 exon
chr10:478701-478833
Coord A exon
chr10:478456-478627
Coord C2 exon
chr10:472439-472549
Length
172 bp
Sequences
Splice sites
3' ss Seq
CGGGATGAGTTGAGAATAAGATG
3' ss Score
-14.47
5' ss Seq
TGAGTGAGA
5' ss Score
1.44
Exon sequences
Seq C1 exon
CACGCCCGGACACGCGATGAGTGAGAATAAGATGGGAATTTGGATGTATCTGCACGCCTGGACACGCGATGAGTGAGAATAAGACGGGAATTTGGATGTGTCTACACCCCCAGCACGCCCGGACACGAGATGA
Seq A exon
ATGGGAATTTGGATGTGTCTGCAGCCCCAGCACGCCCGGACACGGGATGAGTGGGAATAAGACAGGAATTTGGATGTGTCTACACCCCCAGCATGCCTGGACACTGGATGAGTGAGAATAAGATGGGAATTTGGGTGCATCTGCACCCCCGGCATGCCCGGACATGAGATGA
Seq C2 exon
GGGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCTGTCACTCCTTCCTCCGCCTCTCGCTACCACCGCCGACGGTCTTCAGGGTCACGAGATGAGCGCTATCGGTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151240_MULTIEX2-7/14=6-8
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.500 C2=0.866
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF064646=DMAP_binding=FE(32.5=100)
Main Inclusion Isoform:
ENST00000634311fB13822
Main Skipping Isoform:
ENST00000634311fB13820
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GGACACGCGATGAGTGAGAAT
R:
CTGACCGATAGCGCTCATCTC
Band lengths:
237-409
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains