HsaEX1012283 @ hg38
Exon Skipping
Gene
ENSG00000130226 | DPP6
Description
dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]
Coordinates
chr7:154239938-154306092:+
Coord C1 exon
chr7:154239938-154240038
Coord A exon
chr7:154305442-154305551
Coord C2 exon
chr7:154305992-154306092
Length
110 bp
Sequences
Splice sites
3' ss Seq
CTTGGACTCTGGTGGCTCCCAAC
3' ss Score
-14.95
5' ss Seq
CAGGTAATG
5' ss Score
9.43
Exon sequences
Seq C1 exon
GCCAAGATCGTGCCACTGCACTCCAGCCTGGGAGACAGAGTAAGATGCTGTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Seq A exon
AACTCGCCGTCAGACCCCACCTGCCCCGGTGGTGGGAAGCGCCTGGACAGACCATGACCACAGCCAAGGAGCCAAGCGCTTCGGGGAAATCCGTGCAGCAGCAGGAACAG
Seq C2 exon
GACTTTGCTTTGGTTCTAAGACAAGTCAAAGAAAATGAGCTTACTGAAAGGACTTTTCTTTGGATACCTCGTGGCCCTTTCCTCCTGTTTCCCTCAAGAGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000130226-'7-20,'7-19,8-20
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (No Ref, Alt. ATG)
No structure available
Features
Disorder rate (Iupred):
C1=NA A=0.994 C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NO
C2:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GCCAAGATCGTGCCACTGC
R:
GCTCTTGAGGGAAACAGGAGG
Band lengths:
202-312
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains