HsaEX1045456 @ hg38
Exon Skipping
Gene
ENSG00000186777 | ZNF732
Description
zinc finger protein 732 [Source:HGNC Symbol;Acc:HGNC:37138]
Coordinates
chr4:270675-295533:-
Coord C1 exon
chr4:295438-295533
Coord A exon
chr4:273011-273067
Coord C2 exon
chr4:270675-272630
Length
57 bp
Sequences
Splice sites
3' ss Seq
TATATCACCATTTCTTTCAGCAC
3' ss Score
6.5
5' ss Seq
GAAGTAAGG
5' ss Score
6.38
Exon sequences
Seq C1 exon
GTGTTGCTATCTCTAACCCAGACCTGGTCATCTATCTGGAGCAAAGAAAGGAGCCCTACAAAGTGAAGATACATGAGACAGTAGCCAAACACCCAG
Seq A exon
CACTCTTTGTTATTGGAGGCAGAAACCAGTTTTTGTAAAGATCCCCAAAAGCCAGAA
Seq C2 exon
CTGTGTGTTCTCATTTCACCCAAGACTTTTTGCCAGTGCAGGGGATAGAAGATTCGTTCCACAAACTTATATTAAGAAGATATGAGAAATGTGGACATGAGAATTTAGAATTAAGAAAAAGCTGTAAAAGGAAGGTGCAGAAAGGAGGTTATAATGAATTTAATCAATGCTTGTCAACTATCCAGAGCAAAATATTTCAGTGTAATGTACATGTCAAAGTATTTAGTACATTTTCAAATTCAAACCAACGTAGGATAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAGTCATTTCAGAAGTTCTCAGACCTAACTCAACATCAAGGAATTCATGCTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGACTTTAAATGGTATTTAATCTTTAATGAATATGAGATAATTCATACTGGAGAGAAACCCTTCACATGTGAAGAATGTGGCAACATCTTTACCACATCCTCAAACTTTGCTAAACATAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000186777-'3-18,'3-17,4-18
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion (Alt. Stop)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.024
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NO
C2:
PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.1)
Main Inclusion Isoform:
ENST00000419098fB30934
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGTTGCTATCTCTAACCCAGACCT
R:
GCACTGGCAAAAAGTCTTGGG
Band lengths:
134-191
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains