HsaEX1045514 @ hg38
Exon Skipping
Gene
ENSG00000173875 | ZNF791
Description
zinc finger protein 791 [Source:HGNC Symbol;Acc:HGNC:26895]
Coordinates
chr19:12624650-12633840:+
Coord C1 exon
chr19:12624650-12624710
Coord A exon
chr19:12627721-12629357
Coord C2 exon
chr19:12630572-12633840
Length
1637 bp
Sequences
Splice sites
3' ss Seq
GTGCTTCTAATTTTTTACAGAAG
3' ss Score
8.42
5' ss Seq
AATGTAAGT
5' ss Score
8.62
Exon sequences
Seq C1 exon
GGGAAAAATGGGAAGACCCGAATGTTGAAGATCAACACAAAAACCAAGGACGAAATCTAAG
Seq A exon
AAGCCATACGGGAGAGAGACTCTGTGAAGGTAAAGAAGGTAGTCAATGTGCAGAAAACTTCAGTCCCAATCTCAGTGTGACGAAGAAGACTGCCGGAGTAAAACCATATGAGTGTACTATCTGTGGAAAAGCCTTCATGCGTCTCTCATCCCTTACTAGACACATGAGGTCTCACACTGGATACGAGCTATTTGAGAAGCCATATAAATGTAAGGAGTGTGAGAAAGCCTTTAGTTATCTCAAATCCTTTCAAAGACATGAAAGGAGTCACACTGGAGAAAAACCCTATAAATGTAAACAATGTGGAAAAACCTTCATATATCACCAGCCCTTTCAAAGACATGAGCGGACTCACATTGGAGAAAAACCCTATGAATGTAAGCAATGTGGAAAAGCTCTTAGTTGTTCCAGTTCGCTTCGAGTTCATGAAAGGATTCACACTGGAGAAAAGCCCTATGAATGTAAACAATGTGGGAAAGCCTTCAGTTGTTCCAGTTCTATTCGAGTACACGAAAGAACTCACACTGGAGAGAAACCCTATGCATGTAAGGAATGTGGGAAAGCCTTCATTTCCCACACAAGTGTTCTAACACACATGATAACACACAACGGAGATAGACCTTATAAATGCAAAGAATGTGGAAAGGCATTCATTTTTCCCAGTTTTTTACGAGTACATGAAAGAATTCACACTGGAGAGAAACCCTATAAATGTAAACAATGTGGTAAAGCCTTCAGATGTTCCACCTCCATTCAAATTCATGAAAGAATTCATACTGGAGAGAAGCCCTATAAATGTAAAGAATGTGGGAAATCTTTCAGTGCACGCCCAGCCTTTCGAGTACACGTGAGAGTGCATACTGGAGAGAAACCCTATAAGTGTAAAGAATGTGGGAAAGCCTTTAGTAGAATCAGTTACTTTCGAATACATGAAAGGACTCACACTGGAGAGAAACCCTACGAATGTAAAAAATGTGGGAAAACTTTCAATTATCCTCTAGATTTGAAAATCCACAAGAGAAATCACACTGGAGAAAAACCCTATGAGTGTAAGGAATGTGCAAAAACCTTCATTTCTCTTGAGAACTTTCGAAGACACATGATCACCCACACTGGAGACGGACCTTATAAATGTAGGGACTGTGGGAAGGTGTTCATTTTTCCTAGTGCGTTACGAACACATGAAAGAACTCACACTGGAGAGAAACCCTATGAATGTAAACAATGTGGAAAAGCCTTTAGTTGTTCTAGTTACATTCGGATACATAAAAGAACTCACACTGGGGAGAAACCTTATGAATGTAAGGAATGCGGGAAGGCCTTTATTTATCCCACAAGCTTTCAAGGACACATGAGAATGCATACTGGAGAGAAACCCTATAAATGTAAAGAATGTGGGAAGGCCTTTAGTCTTCACAGTTCCTTTCAAAGACATACAAGAATTCACAATTATGAGAAACCTCTTGAATGTAAGCAATGTGGAAAAGCCTTCAGTGTGTCCACATCCTTAAAAAAACATATGAGAATGCACAATCGATAGAAACTCTATAAATGTGAGAAATAGGAGAAAGTTTTCAATTCTAACAGATGCTTTCAAAGTTGTGAAAATTCCCACTGAAGAGAGAAATCCTGTCAAT
Seq C2 exon
TAAGACAGTCTCAGGCAGGTCCTTAAGGAGATATTCCCGGAAAAACTTTGTTATGATAGGCGATGACGGCTCCATGTGCAGGACTGCCCCTGAACGTATTCTGGCGGGACAAAACATGGAGGCAGAAGACAATGATATTGATGATCCTCACCCCGTGTAGTCCTACACTAATGTGTGTTTGTGTCTTAGTTAGTCTTTAACAAAAATAGTTTAAAAAAATTTAATAGAAAAAGCTTATAGAATATGGACATAAAATATTTTTGTACAGCTGTACAATGTGTTTTAAGCTAAATTATTACAAAGTTTTTAAAAATAAGTTTATAAAGAAAATAATGTACAGTAAGTTAAGGTTTATTCATTATTGAGGAAAAAATGTTTTTATGAATGTAGTGTAGTCCAAGTGTACAGTGTTTATAAATTCTCCATTAGTGTACAGTAACATCCTGGGCCTTCGCATTCACTCACCACTCAACTGACTCACCCAGAGCAACTTCTAGTCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000173875_MULTIEX1-4/4=3-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
NA
No structure available
Features
Disorder rate (Iupred):
C1=0.810 A=0.024 C2=0.000
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GGAAGACCCGAATGTTGAAGA
R:
TTAGCTTAAAACACATTGTACAGCTG
Band lengths:
342-1979
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains