HsaEX6042650 @ hg38
Exon Skipping
Gene
ENSG00000158486 | DNAH3
Description
dynein axonemal heavy chain 3 [Source:HGNC Symbol;Acc:HGNC:2949]
Coordinates
chr16:21086849-21098769:-
Coord C1 exon
chr16:21098616-21098769
Coord A exon
chr16:21097355-21097499
Coord C2 exon
chr16:21086849-21087060
Length
145 bp
Sequences
Splice sites
3' ss Seq
CATCTCCTTTTGCCCTGCAGTTG
3' ss Score
9.76
5' ss Seq
ATGGTATGT
5' ss Score
8.35
Exon sequences
Seq C1 exon
ATGCTCAGAATTTGAGTTGAGACTTGAGGGCTACCACAGAGAACTGGAAAGTTTTAGGAAGCGCGAAGTGATGACTACAGAAGAAATGAAGCACAATGTTGAAAAGCTTAATGAGCTTTCAAAGAACCTAAATCGGGCGTTTGCAGAGTTTGAG
Seq A exon
TTGATCAATAAGGAGGAAGAGCTATTGGAAAAGGAGAAGAGTACTTACCCTCTTCTGCAGGCCATGCTGAAGAACAAAGTACCTTATGAGCAGCTGTGGTCGACAGCCTATGAGTTCAGCATCAAGTCAGAGGAATGGATGAATG
Seq C2 exon
GACCCCTCTTCTTACTGAATGCTGAGCAAATTGCGGAGGAGATAGGGAATATGTGGAGGACAACGTATAAACTGATCAAGACCTTGTCTGATGTGCCTGCACCCAGGCGCTTAGCAGAGAATGTGAAGATCAAGATCGATAAGTTCAAGCAGTACATTCCCATCCTCAGTATTTCCTGCAACCCAGGAATGAAAGACCGACACTGGCAGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000158486-'28-34,'28-31,29-34
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.019 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
PF083938=DHC_N2=PU(6.8=57.1)
C2:
PF083938=DHC_N2=FE(17.1=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGAGGGCTACCACAGAGAACT
R:
ACATTCTCTGCTAAGCGCCTG
Band lengths:
254-399
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains