HsaEX7004364 @ hg38
Exon Skipping
Gene
ENSG00000106013 | ANKRD7
Description
ankyrin repeat domain 7 [Source:HGNC Symbol;Acc:HGNC:18588]
Coordinates
chr7:118322855-118427074:+
Coord C1 exon
chr7:118322855-118322996
Coord A exon
chr7:118324486-118324575
Coord C2 exon
chr7:118426977-118427074
Length
90 bp
Sequences
Splice sites
3' ss Seq
CTGTTTGCATGTGCATACAGGTG
3' ss Score
8.44
5' ss Seq
AAGGTGAGA
5' ss Score
8.68
Exon sequences
Seq C1 exon
GCAGAGTCTCACTCTGGTAACCCAGGCTGAGTGCAGAGGTACAATCATGGATCACTGCAGCCTTAACCTTCTAGGTTAAATCAATCCTCCCACCTCAGCATCCCAAGTAGCTGGGACTACAGGTGTGCGCCACGACATCTGG
Seq A exon
GTGTAAAACACACAAATCAACCCTAATACTTTGAAGTCAAGAGGAGGATCCACAAAGAATTCAAATAACTTATTGAAATTGCAGGAGAAG
Seq C2 exon
GCTGGAGTGCAGAGGTGCGATCTCGGCTCATTGTAACCTCCGCCTTCTGGGTTCAAGAGATTCTTCTGCCTCAGCCTCCCAAGAAGCTAGGACTACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000106013-'31-31,'31-24,33-31=AN
Average complexity
A_C3
Mappability confidence:
93%=100=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGGCTGAGTGCAGAGGTACAA
R:
GAACCCAGAAGGCGGAGGTTA
Band lengths:
173-263
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains