HsaEX7102396 @ hg38
Exon Skipping
Gene
ENSG00000197472 | ZNF695
Description
zinc finger protein 695 [Source:HGNC Symbol;Acc:HGNC:30954]
Coordinates
chr1:246945678-246988255:-
Coord C1 exon
chr1:246988121-246988255
Coord A exon
chr1:246967695-246967792
Coord C2 exon
chr1:246945678-246945827
Length
98 bp
Sequences
Splice sites
3' ss Seq
TGCTCTCTCTCTCCTGCCAGCCA
3' ss Score
9.67
5' ss Seq
ACCGTGAGT
5' ss Score
9.4
Exon sequences
Seq C1 exon
TTTTGTCTTCTTATCTTACTGAAGACATTTTGCCAGAGCAGGGCCTGCAAGTTTCATTCCAAAAAGTGATGCTGAGAAGATATGAAAGATGTTGTCTTGAGAAATTACGCTTAAGGAATGACTGGGAAATTGTGG
Seq A exon
CCATGTGAAGATGTGCTTGCTTCCCCTTTGCCTTCTGCCATGATTCTAAGTTTCCTGAGGCCTCCCCAGAAGCAGAAGCATGTAAAGCCCACAGAACC
Seq C2 exon
GGTCCAGTCGTCGACCATCGAGCTGCTTTGAAGACCCTGCGGAGGTTCCGTCGCTGCTTGAACACAGTGCCTGGACTCCCTGCTCCGTGAGGCGAATTTACACCGGGTCCAGCTGCGTCAGCCCGAGTTCTGAATTAAAACATGCCTCCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197472-'4-7,'4-6,7-7=AN
Average complexity
A_C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref, Alt. Stop)
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=0.205 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGGGCCTGCAAGTTTCATTCC
R:
GGAGTCTGAGGTGGGAGGATC
Band lengths:
169-267
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains