HsaINT0094498 @ hg19
Intron Retention
Gene
NA
Description
NA
Coordinates
chr17:46667823-46681408:+
Coord C1 exon
chr17:46667823-46667951
Coord A exon
chr17:46667952-46681288
Coord C2 exon
chr17:46681289-46681408
Length
13337 bp
Sequences
Splice sites
5' ss Seq
CGGGTAAGT
5' ss Score
10.75
3' ss Seq
TCTTTTCTGTGTTTCTCTAGCCG
3' ss Score
10.28
Exon sequences
Seq C1 exon
GACAAAGTCAAGGGGTGAAGGGAAAGGAGGGCCAAGTAGAGCCTCCACGACCCTCGGCTTCCTCCTCACCAGCTCCCCCTCCCTCCAAGTCCAGTAAGAAGTTGGGCCAAGCTGGAAGGGATTGACCGG
Seq A exon
GTAAGTGTCCAGACTTGACTCTTGTGCTCAGGGTGGAGGCTGACTTGGATGGAGGTAGACTGGGCCCTAGCCCTGGGCCAGGCTGAAAGGGAACCAGGGGTCTTTCTGAAAGGACCCTAACTCCTAATCAAGAGGGAAGATCAGTTGGGCCCTTGGAGAGAAGGAGCCCTTGATAAGGGTAGGGAAGGCTGAGGGTGAGAGAAATCCTTTGAAATCCAGCTGAATTTTTTTTTTTTTTTTTTTTGCTTTAGTTGGTGGCAGAGCTGAATTGGGACTTGGAGTAGGAGACAGGGGGCTGGGCAGGCCTCTACCACTCCCAAAAGGCCAGGAGCCTCCTGCTGAGGACTTAGGCCCAAATTACTTTCCCAGAAGAGTTTTCCAGAGGCTTCCTTGGCCAGCTAGTGGAAGACCAGGATGAAGTCTAGCTCAGCCTTTCCTCTGCCCCAGCCCCACATGGGGTTTCTGGGCCTTGGAGTCCCCCAGGCATGAAGGTCTGTTCCCTGGCCCAAGCACTGTTGACCAAGCCAGTGACTTACATGGCTGAGAAGAGTTGTTGGGGAGCAGCCTACTTTTTCTTCCCTGCACCCCAGATCTATTGAGAATGGTGCAGGGTGTGCCCGGGATGGGAGAGGCAGACCCCTCGGAGAAAAGACAAGTGGAAGGGCAATGGAGTGGGGGAAACATTTATTTGACTTCCAGGAAAGCTACAAACAAATACCAAAAGCGAATCACTGAGACAGGCCCCGCAAAGACAGATTTCACACGTAGCACAGCATCCACTCGCTCACTACAAATGGTCTTGGAAGCAAGATGGGTAAGGGAGAGATGGGTCTGACCCAGACTATCCCCATATTTACAAGCTTTGGGCCCTCTAGCCAGACCCATGGATTCACAGAGAAATACACAAGACATTTTGCACTGAGGATCATTTTTGTTTCCGTATACTCCCAGACCAGGCCTTGTGGGGCCTACCCAGGCAGCAGGAACTTAAATCTCACTATCTTCTTTCTCTCTTCTCAATACCATCCCTTTGGTCCTCCCTAGCCCCTTCCCACCCTAGGACCAAGCCCCTAGGAGACTTGGGCCTAGGGAGTGAGGAGGGAGGAGGAGGAGAATGAAAAGGGACTCCATCTCCGAAGCCAGCTCAGCTTGACCCCACTGCGGCACTACCCCACCTCAACTGCTGCCCCTTACAGAAGTTTCCAGCTGAAACTCAAAATACAGCGATCATCTTTTTATAAATAAGTTAGAACACAGATGGGGAGGGGAGAGTTCACATTAAACATGCGAATTTCTTTTTTTTTTTTTCCTGGGGGAAAGACTGCAACCACAGACACAAACATTCAGAAACACTGGCGGATTTGGGACAAGCAGAAGGGAGTTGGGAGCATGGAAGGAAAATAATAATAATAATTATTATTAACAATAATAACAAGATAACCAGTCCAGGAGAGAGGGAGCCACAGGAAGACCTAAGACCAAACGAAATATCGTAACACAAGGCGAGGCAGGCTTGTGGGAACCGGTCCCCAGCGGGCGGCGGCAGAGCGGGGAGGATTGGAGGGGCCAGGGCTGGGGGTGGCACGGGCTCTTGGGCCGCTGGGCTCCTCTGGGCGGGCTCAGGGCTGGAAGGCGCTGCCAGCTGTAGCCAGGCTCATACTTTTCAATTTGTTGTCCTTCTTCCACTTCATGCGCCGGTTCTGGAACCAGATCTTGATCTGGCGCTCGGACAGGCAGAGTGCGTGGGCGATCTCGATGCGCCGTCGCCGGGTCAGGTAGCGGTTGAAGTGGAACTCCTTTTCCAGCTCCAGGGTCTGGTAGCGGGTATACGCGGTCCGGGCCCTTTTCCCGTCCGGCCCGGTCATATCTGGAGCAGATAGAGGAAAGCCGCAAGGCAACATTATTCCGGTTAAGGGAGGGGGCACTGGGTGGGAGGGGGCGGGGGAGCAGGACCCAGGCGTCCCGGCACCCAGCTCACCACAGCTCCAATCCTCTCTACTCCAGATGCCCACATTCAAGCTCGATTTCTGCACCCCTTTCTACTGCATCCCCCACTTCTGCAGGCAGCCAGTGCGCCCGGCTTTGTCTCTTGCTCGCTCCTAGTGCCTCACCCTTGGCTGGGCTCAGGCGGCCGCTCGCCCCGGGAGGGAGGAGAGCGGTTGCACTTTTGCCCCGGAAAGCTCCTTTTACTGTTCACCCCTTCTTTGCTAGCGACAGTCTCAAAATTTCAGGGGTAAGCAGGACCCTTCCCCACATTATATGAACCCCATCCTTTATCCTAAAGCTGGTTCAGCTGCGCTAATAAAAACCTAAGCCGAAGCTGGAAACAAATTATTAAAAATACCCCCCTCTTAACAGAGAGACCCTTTTTGGCTCTGTCTACGAAGCTATGAGGCCCCTCTTAGATACTTCTCCCCCTTAGAAAAATGAATCTATATTTAGGGTAAAGCCAAGCTCTCCTTGTCCCCCCGATCCCACCCCAAAACGCAGAGAAGGAAAGCCGAGAAGACAAAAAAGAGAGAGAGAATTACCATGGCTGATGTGAAGCTTCCTCATCCAGGGGAATATTTGCGGAGTCTGCCCCTCGGGCGCGGCTGTGGAGGTGGCCATGGGCTCTGGCTGCGCCCGAGCTAGGCTGGGGCTGCTTAGCTGGCTTGCCGCTTCCTCAGGCTCCGAGGACGCGCTGGCCTCGTCTATTTCGGTGAAATTGGCGCTGGAGCTGGCTGAGGTCGCCTGGTCGGAGGGGGACGAAGCAGAGGGCTTGGCGCCGTGGCTGTCGCCGTTGGTGCAGGGCAGGGACTCGGGCGAGGACAGGGAGCAGCTCGAAGCCGCTTGCCTGAAGCGGGGCTCCTGGGCGGGCGCGGGGAAGGCGCGCGAGCTCTCGCCCACCGCCCCAAAGTGGCTGGAGGAGGCCGAGGAGCGGTTGACGCTGAGGTCCATCCCATTGTAATTGTAGCCGTAAGAGCCGGTGTGCATGGCAGCGGGATCCCTGTAAGAGCCGCTCAGAGAGCTGCCACTGCCATAATTTAGCAACTGATAGTCCGGGCCATTTGGATAACGCCCCGAGAAGGAGTTTACAAAGTACGAGCTCATTTGGGTGATTTTGGAGGGCTTGATTTGTGGATCGTGGTCGTTATAACCCTGTGCTTCACGATTTATGATGTATTAATGAATTATAGCGATGCACTGTACTTCGTTTTGCTATGTATGCGGCCAAATATGGGGGGGGGGTTGGAAGGGGGGTGGGGGGCGTTAGGGAATCACGTGCTTTTGTTGACCAGTCGTAAATTCTCGCTGATGACCTCAAGAGGTAATTCATGCTCTATGGTTACAAATAATGACGATCCGAGAATCGTTAGGGCCGATTCAATGCGAGCCTCCGAGAGAGGGGGAAAAAAGGAGAAGGGGGAGAAACAGAGAGAAGGTTGGCTTTGGCCTCTGAGCAGAGCGCGCCACCTCCCGGCGACCGACGGGAGCGCGGGCGTGAGACCGCCATGGCGGCGGGCGGCTGCCTCCCTGCTGGCTCCCTGCAGGCTCCCTGCAGTCGCCGGGAGAGAAAGAAACCCGGCCAAGGCTCAGCCACAGGGTTGAGCCTTTTAGAGCAGGGGTTGGGCTTTTTACCCACTTTCTTGTGGGTGGGGTTAGCCTCTCTATTTGGTTCTTTCTCCCTACATCATCATTGTCGTTATTATTTTAACTTTGGATGAGAAGATCAAAGATAGAGTTGCTTTTCCCTTTCTTGGGCTTTGCAAGTCTCCGAATTGGAGGCGGAAATGGGGGAAGGGTTGGAAGTTGTGTGTGAAAAACAATTATTGCAACGGGTTTTCCCCAGGAGCTTAGTCCGGCCTGCATCCTGGTGGAACTGCTGTTACCGGTCCACAGCGCCCAGGCCGAGCCGGCAGGGCTGGGCGGGAGGCTTGAAAAAGAAGGAGAAGCGTTCACTTCTCCTGGGCCACTTGGAAGTTCGAAATCCCCTTCCGGACCTCCTTGGTGGTCCTTAGCCCAGGCGTGGGGAGTGACAGAGCAGGACAGGGACCCCAGAAACCGAGCACAGCTGGGGCTAAGCGGCCTAGTTGCCGAAAAGACTGCAGCGGCCACCGCGTCTGCTGCTTAGTTTGAGTAGTAACATGTGTCTGAGAGTTTGTAAAGCGGGATCCCTTCCCCTCCTCCTCGGCTATTGCATTCGGAGGCCCCACTACAGGTCCCTCACTCGCAGCTAGGCAGTTTGAGAATTTGCCTGGTGGCAGCCGCCTTCCCGGAAAAGGGGTTCCAAGGACCCGCATGCTTTGCTGAGCACGCTGGGCGGCCAGAGACCGCCGCAGCTGGTCTCCTATTAGGAGGGGACTATTTTCTTTAAAAATAAGAAAGGAAGCGAGAGGGCGGAGGAATAAAGGAAAACAGTGACCGCAGCTTGCCTTCTGGGTGCCGGTGCAAGCAGAGAGAGAATGAGCCATTCTGGGTTGAGAGGATGACACTAAAAGCCCCATCACCTGGCCTCCTGCCCTGGGGTCTCCAAGGAGCAAGGGAAAGTTGTGGCCTTCGGCCTGTGCCTGGCTGGTGGCTTTACATTCCCCTACTTGAGGCTGATCTCCTACTTGAGGCTGATCTGCTACTTGAGGTGGGAAGGGGCACCTGGAGCCTTCAGCTGCAGGGTGAGAGATACCCAGTGGCCCCATTTTTCAGTCTCCAGAGCCACAGGCCAGGAGCGGAGGGCCAAGGCTGGCGAAAAAACCTGGCCATGTGGACGGGCCAAAGACCAGGGGTCGCTGCGAAGGTGAGGACAGAAAAGCGCTGCAGAGGCCCCCAGACTATGGCTCCGTCTCCGCCAGAGAGCTTTAGGGGCCTCAGTGGCTCCCTTAGTGCTGTGTATACACGAGGAAAGGCTAGAGAATGAGAGGGACACAGCACCTCTCCATCCCCCAAGTCTGCACGGGGAGAAGCGGCTGTGAGCCTCAGCACCAGGGAAACGCAGCGCTGGGGCCTGGGCAGGACTGATCGCTCCAGCCTTTATCTCAGCTGTAACTTCCCAGTCGAACAGGGCTCGCTTCGGCGGGCCAGGGCTCTCGCCTTTGCTGAAGAATTCTGGCTCAGGAAAGATGGAGAGGCTGGGGGTTGAGGAGAGAGGAAAAAATGGCAGGGGAGGATTGGAGGTGACCGAGCGTCGAGTTTTCACATCTTTATTATTGTTGTTGTTGTTGTTATTATTATTATTATTATCATCATCATCATCATCATCATCATCGAAGTATTTCACGTCCAGAGCTAAGACAAGACTACAAACACAACACATAGAAAATTAATAAAATAGAACTTTGTTTTCTTCTGAGGCTCCTCTTCTTACTTCTAGGTAGTATGTGCTCCTTCCAGTGGCTTTGGGGAGGGGGTGGGAGAGACGACAGGTCTGGGATCAGGGAGTCTTCAAGGCCCCCGCTGAGGGGACAGCGAATCTACCATTGAACCGTGCACGGGGGACATGGACAAAATGAGACGCGACAGGGACAAGAGCATTTTGCTCTGCTTCCAGGAAACATCAAGTGAGTCCGCTCCTCAGTTCTCACCAGGAAGCCTGATCAGGCTGAGGCGAGTTCCTCGGGAAGGAAGGGCGCGCGGGATGCTGGGTGGGCTCGAGTAGTGAGGCCTCAGAGCACCCGCCGGGAGCTGTGCGGGCGGGGGCGTCCAGGAGAGCGCTGGGCCCCGCCTGTCTGCGCCGGAGAGCAGGTCTCCTGGCTCCCCCACCCGAGAGCCTTCCTTCCCGGGTCTCTCTGACGCCCTCGGCTCCCCACAGGCCTTTCCCCTCGCGTCCTCCCTCCCTTTCCAGCACCTTCACTCGGCCTGTTTTTCTTCCTCCTCCTCGGCACTGAGCTGAGACGCGCTGAGCAGTTTGCTCTCCTTTTTCCACTTCATGCGTCGGTTCTGGAACCATATCTTGATCTGCCTCTCCGTCAGGCACAGGGCGTGCGCGATCTCGATGCGCCGCCGCCGCGTCAGGTAGCGATTGTAGTGAAACTCCTTCTCCAGCTCCAGCGTCTGGTAACGTGTGTATGTCTGGCGGCCTCGCCGGCCGCTGGGCCCAAAGGAGGAACCTGTTACGCAGAGTGGAGATGCTGAGGCCTGCGGTCACCGGGCCCAGGACCCCCTCCCCTAGTCGACCCTCGAACACAGACTCCAGCCAGTACCGGGATGCCCTCTATTCTGCCGGCTCCCTTCCCCCGTTTCGCACTCCTCCAGCGCCCCCTCCAGATTCCCTCCTAGTCTCCTAGGCCTGTGCCGTCTGTCTAGACTCTAGATGGGGGAGGGGAGGAGCAGTTTGAACTCCCACCTGAGCCTGGGGGGAGGGGCTGGTCAGGTGTGTCTCTTCCTAGTTGCATCTTGTCTTTCCCTCCCTTTCCATCCATCTTGTTCCCACCCCCCGTCATCCCCCCAACCCAATGATAAATCCAGGCCGTTAATCCGTAATGACGTAGATCGATCCATAGTCCACATTAACGGCTCCTCACTTTCGAGTCCGGCTAATGGACATCAGTTGGGACTTAAGGCCAACAAATAATCCAACCTGAGACCCCGCGCCTGTTTCTCCCTCTCTCGCTCCGCCTGCTCCCTCTCTCTTCCTTCCCCTTATTCCTCCTCCCTCCTCTGACTACCACCCCTTTCCTGGTGCCTCATCTTGCCCCAGCTCCCCACCCACAGGGAAACACAGTCCCAGACAGACTCAACTCTTTCTCTTCAGCGTCACCCCCTACCCCCTTGCATGACGCACTCCGTTTTTAATGGAGCCGTCTTTGGTTGGGGAACCCTACCAGGGCTGGGAGAGGGGGGTTGGGGGCTCAAAGTAAAGCCAAGCCAGTGACTGCAGGCTCCTGCTCCCTTCCCTGTCCTGGAACCCCGGCTCTGGCCAGGCGCCCCAGGAGAGCACACTTGCTCCCCATGGCTCCCAGTGCGGCTGGGACTTTGCAAACTTTGTAACTCCTGCCTAATAGGGGACACAGCGAGAGACCCCCGGCCGGCGCCCAATCTTCTTCTATCTCCTAACTGAGATGCCCACCCAGCACCCTGTGGGAGATTGGGGCAGGGGGCGCTCACTAGTTCTGTGTCCCGGGGTGGGCGCCCAGGGGAGCCGGGGCGACGGCGACGGGAAGTCTCACTCACTGTTGCACGAATTCATCCGCTGCATCCACGGGTAGACCGGAGTGGAGCACTTCTGCTCTTCTGTCTCGCCGAACACGCTCTTGTCCTGCGCGCAGTCCGACTTCCGCGGCTCGGGGTGGAACGGGGGCTGCTCGTCGGCGCCGGAGAGTGCGCAGGCCGACTCTTTCTCGCGGTAGAAGGCCGGCGCCGGCCCGTAGTCGCAGGGCGCCGCTCGGCCGTAGCCACCGCCCGCCGGCGGGTAATAGGAGGAAGTGGCAAAGCCCTTGTCCTGGCCCGGCCCTGGCCCGTAGGGCGCGGGGTAATGTCTCAGCGGGTCCGCATAGCCCGACGAATAGAGCGGTAGCTGGCCCAGGAAGGACTCCTGCCCGCTGGCCAGAGTGACGGGGAAGGTGGAGTTCACGAAATAGGAACTCATTGGGAGGGGAGGCGCGCGCGGCCGCTGCTGCTCCGCCGGGTTTATGATTTGTTGTGTTTTATAGTCCGAGCGCCGCGCCTATTAGTAGTATATCCGAGATTGGGTTTTAGCTGAGGGGGGATGGCGAGGTGCCAGTGAGGGCCAGAAGGAAATACAACCATCTGATCCAACACTGACCAATGGCAGAGGCAGGAATTGTCAAATAGCACCCAGGAGGAGCGCAGCCCGCACGAGGGACCCGCGCACAAACCTATCAACCTTTTTTTTTTTCCTCCTTCTCCTTCGCCTTTCTCCTCTCTCCCCCCAACAACACAACGCGTCCTGTTCCACCTACGTAGGATCTGTGAAACAGGCTCAGTGCCTTTGAGGGAGGAGGGAACGTTTAGATTGAGACCACCCCACTCCCGGGTGATTAAATAAATATGTCTCTCCCCCACCCCACGCAGGATTGGAAAAAGTTAATTGTGTTTTCAGAAAAGTTAACCCCTGCGTTGCTTCGACCCCTTCTCTCCGGGGAGGGTTGGGTAAATGTCTCCGAATCGCCTTGAGAGAGAACTAAAGAAGGTTTGTTTCTAGGGTTTTGTGTCGGTAGAAGGTGAGAAGAGTTCTCCGCTAAGATAAGCAAAGAAGAAACACCCTCCTCCCCAGGTTTTGAACATCGTTTTTCCTGTTTATCAGATCTGCTCTGTCTCCTCCAAGCCTCGGCTTATTGTTCCTGCTTCTCCACAACCCTTCTGGTCTGAGGGGGCAGGCCAGATCCCACTGCCTAGAAGACCCAGAAGAGGAGGAGCTGGCAGGAGGGACTGAGCCCAAGCTTCCCCTTCTGACTCTGTGGCTAGACTAGGAGCTTCTTGGAAGGCGGCGACGAGGGTGGCTGCCCAAAACATTCTGCCTGGTTCTAGTATGCAGCTGCTCACCCTTGGCAGGGGAAGGGGCACTGGGGAAAGGGACTAGCCCTCTCCTCACTTGGTGATATGGAGTGAAGGAGTGAGGGGTATCCCTCAGCCTAGGTGGCTTTATTTGTCTGATCCCTATCCTGCCTGCAACCCTCACTCCAGTACCCTCTACAATCCCAAAAGACTTAAGAATAGCCTGGGCTATAGGATTTTCAGGAATCAGGGATGTCCCAGTAAATCTGGGCACAAGGAAGAAATCATTCTTCTTCCAGTTGTGGGCTTTGAACCCTCCTGATAGTTGAGGCAGTCAGAGACCACTGGGAAGAAATGCATCCTCACTCCTCTTCTAAGTCTCTGTAGGAGCTGCCAGTTCTTTTTAAAATTAATTCTTTCCCAAGACTTGGTTTTTGCTTTAGTTTGATAGGGAGAGAAGGTCGTTTGCGTTCTCTTGGGGACTCAGCAGGCTGCTTCCAGCCATCAGCCAGCATCCCCTCTCCCTTCTGTCTGTATCTCAGCATCGCTACAATTCCCTCCCACACCCCGTGTTTGTATCATCAGCTTTGCCGCCTTACAAATTTAGGTGTGTCAGAGAATGTATGTCTCTGGCTCTTTCATCCAAGGAAAATAAGCATTGAGCCCAGGCTGGGAGACAGGGCCACAGTGCATTCCCAACATTCTAATATACATACACAGGCCAAGTAGTGAAGGGTGACAACCTTCACACCTGGGGACAAGAAGGGGCCAGGGCATGGAACAAAGTCAGATGTCAGGCCAGGCTGACCCTCCTCTGCCTTGTCCTTCCTTTGGGCTCCTTTTTCTGGCCAAGTTCTGCCCACTGAAGATGGTACAAGACACTAGGGAAGGTGGCAGGGGACTGAGCTTGGATCACCAAGGGTGGGAACTTATTTGGTTGCAACGTGGTCTCCAAGGCTCTCTAAACTCAGGGCAACTTCTTGGCTGTACCTTAATGGCAAAATAGCCATCCCTAGATGGCCTCCAATTACTTCCTAACCTGACTCTGTGGGAGTGTTTGATAAGCATTTAAGAAAACAAATTTAAACCCCCTGATAATGAAGAAGGATAAATATTCCATATCTAGGTATGGCTGGGCTTGCTTCTAGAGAGGACTAGGGGCCATTTGAACAGGGGGAGAAAAGTGGGAGAGAGTACCTGCATGCACCTCCCTGCCTACTGCTGAGGCTGAGCCCTGGGCCTCAGCCTTCCCTGCCTCCTCCCTGCCCACAATGTCTCCATCCTAGCACTAAATAGTGTGGTTTTCTCAGTGAAGTCTGAACAAAATAAGATCTGGTGAGGAAGGGAGCATTTCCCTGTGTCAGAAGCAGGGAAATAATTGCCTTATCTTTAGAGTCACAGCCCCCAAATTAACCTCACCTCTGCAGGTTGCTTGTCTGGAGATGGAGCCACTACAGGCGGGCCTGGGCGCCTGGAGTCGGGCATGAAAGAAAATAGCGCCTCATCGCTCTTATCTAAGCCCAGAGGTATTTATGAGCGTTTATTCGTCTGATCCGTTTGTTTGGGAAAAAGAGCAGGCGGGCAGGGCAGGCCAGAGACCGACTCCTTTCTGGAGCCAGATCCCTACGAATCTGTCTGTGGTTCGGTCCACCGCCCTCTGTCTGTCTCCTTGGGGGAATATGTAAATACACAGCGGGCTCAGCCATCCGCCAGTCTGGGGTGTCTCTCCCTGCCTCAATGAGGAAGTGTGTGTTCAGAGAGATGGATAGAAGTGTGTACCAATTCTTGAGTACATAACAGAGGGATTGTACAGATACCCCACAGGCAGGATTTATAATTGTAATTTTCTATGCTGTGAGTCTGCAGTCCTGTGGGCAAGCTAACACATTCCAGCTCCCAGGAAAATGTTTCCTAAGTTGTGTTCAGTTCGGGAGTAAAATTCTTGATAGGTAACCTCAGGAGGGATATTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGGTGTGGTGTGTGTGGGAGGGTGCTGAGACATTGTCCAGGCTTCCAATTTCCTCTAAGCTATAAAGCCCTCTCCCTCAGCTCTTTGAGGTGATGAGCACCTTCTCCCACCACCCCCAACTTTGGCTGGGGTGGGGTGGGATGAAAATATTTCAACTCAATTCTCGTCCTGGACTCTGTTTCTCTGGGTTTGGGGAACATAAATAAATGTTCCCAGGGGTACTGAGTGATCACTCCCATAGGTTGAGGGAGGCTGTTTAGATGAGACACTTTGCCCTAAAATCGGCCCCTCCAAATCAAAGTACAAAGACTTCATTTTCATTATGCAAAGGAGCGGCATCCTCTTTGATCTTTAGGGGAGTGAGCAGTAGTGCTGAACCCACTCTCCCGGTTTCCTACCCGCAGGTCCAGGGGACAACCTGAGGGCCCTGAAGTGTTTCAATACCATGTACCAGCTTGACTTCTCTACATGTCCTTTGGATTGCCCAAAAGCAAAATCTCAGAGGGGCCAAGGACCTTCTAGGGCTGGCTCCCTCAGGGCCTCCTATAGAGCAGCTCCTTGAGTCGGGCCTTATAGCCACCAGAAAGTCACCTCGCCGCAGGAAAGCTATAAAGAGCTGCTCCAGAGGCGCCGAAAGAGGGTGAGGGCTGCAGCCACAGTGTTTGTCCCCAGCACCACCAGGCCCCTTAACCTCGTCAGCTCCTCTAGCCCTCGGCCAGACTCTGGCAACACCTTGGTTTGCCTGGCACCGCAGGCAATTTCCTGGAACCCCACCCCCACCCAGGAACGGGGACCACAGCACCTTTAAAGGAACTGCCAGAGCTTCCTCCTACGGCTTGAAAGCCCAAGCTAATCAGTAACCCGTGAGACAGGGGCCAATATTCAAACGCTGCAGCAGAGGCGCATAGCCTAGCCCTGGCCACCCCCTCTTGGGAAGGAGGTCGAGTTAAGCCGGTGTGGAGGGTCCAACAGGAACGGAAATTACGACGGTGTGGTTCCTTAAGGATTTGGCCCCAGTCCCACTACCAAATTTTTCCCAAATCATATTTAGGTAGACTTCGCTTGAAAAGATCGAGAATGGAGGAGGGGATCGGCACTCACTTGCAGACATCAACAGTTTCCAGAAAATTCGGTTCAATTCCTTCACCACGGACCCACCAACCAAGGAGCTGGCAAAACCCACTAACCAACCAGGAGAACACAGACCCGGTTTGTCTTTTGACAACCGAGTGGAACTGACGGGGCCGGCGCCTGCCCTGCGGGTCCCCTCCCTTGGCTGAGAAGAAAACCAAATAAACCTTGAACAGCCTTGGCTTCGGATGTCTCAAGCGGCCTCATCCTCTCCCGCGCCTTGGTGGGGTGGGGGTGGGGATGGCGGTGGGGGTGTCGGCTCTGATCCCTCCACCCTTTGATTCAGGGCCCCTGCCCGCTGGAAGCAGAATTAGACCTTTTTATATATGCCCTAGAGGAAGCCGCTTCCCTTGCCAGCCGCCAGGTTTGGGGCTAGGATGGGCGGGGACGGGGGCAGTGGGAAATTGGGGATGATGGGTGGAGGAGAGACTTCTGTTCTCTAACTCACACCGGGGAACCAAGATCTAGCTGAGAGCGTCGGTGTGGGCCCGAAATCCCCCGAATCCCGTGGACCCTGCGAGGCCGGGGCTCCAGGCGTCGGGCACCTCTGGACAGTGTCGCGGGGCTTGCGGCGCCGAAGCCGCGTGTCTCCGAACGGACGGTAGATGGCAGCAGACCGCATAATTTGGGTCACAGCGAACTGTCTAAGGGAGGATTTATAACCCTCCAAGACTACAGGAGAAAAAGACCTTTAGTATGGGTGGGTTTGGGAAATTTTTCCCTTGAGAATAGTCCCCGAGTGCCGTGGGTGCTGGCGGAGAACTCTAGCTACGAAGCCCAGCGGTCCCTCCAGGCGCCCAGGCCGGGCCTGAACCTAGGGCATCTACCTGGGGCCACAGAGCCGCCTCTTCCGCGCCACAAGTGGCAGCGTCGTCCCTCTCCTAGCTTAGGACTGAGATAATAAATATATCCCCACTTCCAAAACGCCCCAGACCCTGTAACTCCGGGGCAACCAGAGGCCCGAGGCTGAATGTCCTGCATCTGGTCTTAAGAAAGAGAAAAGCAATCACATGTTCGTGCAAACCAGACTAAAAATCACAATTTCTCCTGCCCTCCACAGCCAACATCACTTATCTCTTGGCTGGAAGCTTCCCCAGAAGCTCCCTTACCCCATTTTTAAGTCCTTGCCTCAAGGCTGGCACCTACTTCCACCCCACGAGCTACTTTAGGAATCTCTGTCACCTGCCCAATGTTCTCCGCCCTCCCCACCCCCTAGAAGGCCTGACTGAGGGATAAAATTGGACACCCGAGGGACGGGACTGTCTGAGCTCAGTGCCAGTTAGCTTTTCAGTTTAGACGCCGCTAGGTCCCATAATTGGATTTTCTTTTTATTTTCTTCTTTCATTTCTTTCTCTTTTATTTTTATTTACAAGCCTAAAACAAAAAGGCACTTAACAGCTTCTTCACAATCACCATGTCTGGACCCAGGAAAGTTTGAAATGTTATCATATCAGACACACACATGGCAATTTTTTCCTCCACCGAAATCCACACATCCCATACCAATACAACGCAAGTAATAGAATCAGTATCACGCAGAAACCAACAGCTGTAACCTACCGCATTAAAACCACAAAACTGTCTCCCTGTAGAGCGAGGCTCCCTCCTGCGGGAGTGGCGAGATACTTGGGCATTCTCGGGCAGGCTTCCTGGTGAGGGGGGAGTCTCCCTCATTTTTGGTGTTTCCACCCACAGCCCTTTAATTTCAAAAATGTCTCCGAAGGGAGATAGTAAACATTTCTCTGTAAATTGTCTTTTCTGTGTTTCTCTAG
Seq C2 exon
CCGTTTCCTCTCCCTCGCCGGCCTCGGCGGAGATTCCAGGCCCTATAGAAACCAGGACGTCCCTTAGCGCCACCGCCTCACATGCCAGTGCTGCCGGGAACCCAGCGATATCCGCACCAG
VastDB Features
Vast-tools module Information
Secondary ID
-LOC404266:NR_033201:1
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)