HsaINT0115647 @ hg38
Intron Retention
Gene
ENSG00000123358 | NR4A1
Description
nuclear receptor subfamily 4 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7980]
Coordinates
chr12:52043727-52055961:+
Coord C1 exon
chr12:52043727-52043911
Coord A exon
chr12:52043912-52054326
Coord C2 exon
chr12:52054327-52055961
Length
10415 bp
Sequences
Splice sites
5' ss Seq
CTGGTGAGT
5' ss Score
10.1
3' ss Seq
GGGGTCTCCTCTCTCTCCAGAGA
3' ss Score
8.93
Exon sequences
Seq C1 exon
TCCAGAGCTCGCTCAGCTGCTGCCCAGCCTCGGCTGTGAGGATAGGCTGGCTGGGCAGCACGTCTCTCCCCACAGGGCTCCCTGAGACCACCAGGAAGAGCCCCCAACCAATCTTGGGATTCTCCCTTCGTGCGGTTGTCTGGGACCTTTTTCCAGGGTCAAAGCAGATCGTGAGGAGGAAGCTG
Seq A exon
GTGAGTCTTGGGACAGGGACATTGAGGAATGGGAGCTGGGCTGTTTGGATTTTTTCCCATTGTGACTGTCATGCCAAACCCTTTGGCCTTGGGCTGCGGGGAGGAAGCAAGGGTGGCCGACAACTGGAGGCATGAGTGTGCAGCTTGACCACAGCTGGATGACGGTAGTTGGACTTGTGAACGCTGTGACTGAGAACTAGGAGAGGTGTACAGAGACAGCTAATGCAGTCTAGCTCCTTTCTCAGAGCTTCCCCACAGGGTGTCCGTCCTCCTCTCCTCTCCACCCCGCCTGGATGAGGCACTGGTCACTGCGGCGAGTTTGGTGTCCATTGGGGTATCTCAGGATTGGCTTCTGAGTGGGGCCCCTGAGCCCCCACTAGTTGGGACTGAGTGGCTGGGCCAGGGGCTTGGCGTTCTGCTGAGCCCTCAGTCCCTGGCCTGCCCCGCTTGCCGGGCCCTTGCCCGGCCTCCCAGCTGCTTTGGGTGCCTGAGAAGCAGAGCTGGAGAGAGGTCTGGCAAGTCCGCCAACCAGCTTGCCACAAACACGCTCCGGGACCTGGGCCAGGGACTCTGGCCCGGCATGGAACAGGCAGCAGCTCCTTACGTGGGAGGCTCCTGTGCTCTCCTTCCCAGTTCTCAAAAAAAAATTTTCCCCTTTCTGAACGTGAGTCTCTAAACGAATCCAGAGCCTGTGACTAAAAATACTTTAACAATAGGAAAGTGCATCAGTCTTTCCGGCTGGGACTCGTTATCAGAGAGTTTTTATTTTGGAATTTGAAATTTTGCCCACGTAGGCTGGGTGGAGACCTTGGGCAGAGGCAAGGGAATTTGGTGGGTGCTGATGTTCTGCAAGGTGGTGGGAGACCCTCCAAGGCGAGAGGAGAAGAGAGCTGGCCAGGAGCTGAAGAGACTGAGAGGGAAACTGAGGGAGGTTCAAGGCGTGGGGCAACCTTTCCCAAAGGAACTCCGTGATCTTGTCTGTGTTTTCCAGCCCCGTCTGGTGGTTCTTCCTGAAGTCTGATCTTATTCTTTTATGCTGTATGTTAATTTCTTCTGGCCTGAGAGGGAGGGAGGGAGGGGTAGAGAAATCACTGGACTGAAGATAGCCTCTGTGGCCATAGCCTGACCTCCTTAATTAACTAGCTCTCTCCAGAGTATTAATTGACCACTCGCTGCATACACAGTCTAGAATTCTCCCAGTGCTGGGTAGAGCCACATCTCTGGGCACACTCTCTTTTCCTCTCACTCAGCCCAGGAGTGGGAGAAGTAGAGATGGGGTTACTGTTTGTCTGTAGTTCCTGGAGCAGGAGGGCTGCCGGCTCCCCCGTCCAGCTGAGGACCCTGCTATCTCCTGCCCCTGCCACCCTCCCTGCCAGCCCCAGGATTCTGCTGCAGGCTGCTGTGGTTGTCCCGTTGCAGACATGAGTTCCACAGGGCCGAGTGTGGGACTTGAGTATGCATGGATTTTGGTATATGTCGGGGTCCTGGAACCCATCCCCCTGTAGCACTTCCCTGTGCCCTGGAGGTACTGCCTGCCTCCCGACTTCCACCCTCACTTGCCATTACAGGTTTCCCATGACAGTGGGGGAGCCCAGGCCCCAGGCAGTGCTACATTTGGATGTGGAGCCTCTCCTTTCCATTGTGAACTGAATTCTACCAGCACTGGGCCTGGTGATGTCTGCATTAGGCAGATGAGGAAGCAGTCTTGGAGAGGACAAGGGACTGGCCTCAGGTCACACATCAGGCTTGCTAGCTCCTGGACAAAGATGCCTCTGATAGCTCTTCCATATTTCGCCCCTGCTGAGAGCTGAGGGGAGGAGTGCGGCCACTAGCTGACCTGCCTGGGTCCCTGGGAGGCTGGTTTTGGGGAGGTAGTGATACATGTGCTCATGGTAGGGCTTGGGCAAGGGCCAGGAGAGCAGAGCCTGGGCCTGACCTTTCACCCCTGGTTCCCAGAGCTGCCCACGGGAAGCCCCCAGGGCAGTAGGCAGTGCTTCCCTGCCCACAGTGCAAATCCCCCTGCCTACTGCCAAAGCAGGAAGAGGAAGTGGCCGGGTCAGGGCTGGCAATAGGCCCTGGGGCCGAGGAGGGGAAGCTCCCAGGGCCACTTCTGAGCTGGAGAAGGCAAAGCTCACTCCTTCTGCCCACCCCAGGGGAAGGGTGTGGAGGCCCATGGGTGGGGACAGTCTCAGTGAAAGTAGGGCAAGTTCCTGACCTCTACTCAGTAGGGGTGGGGCCCAGCCCAAGGTGGAGGGGCAGCGTGGGAAAAGGGCTGTGTAATTCCACTTCCTTCATCCCCTGTTTACCCATCTCCACCCCTACCCTCTGGGCTGGGGAATGGTGGTGGACATTGGCTGCTCACTTGGGGCCTGCCCTGGGCTACTTACTACTGAGGATGCACAAAGGATCTTCCCACCACGGACTAGGAGACAGTGCCCTTGTCCTCATGTTGTTCACATACTGGTCGGTGAGGGATGGGTCTGAGTACATGATAAATCCCTGGGCCCCATAAGATTTGACTAGGAGGGGTAAGGGCCTGGTGAACTGCTCAGAAAATAAACTGTGTTGTCAGCAGGAGGACCCCTTTCTACTATGAGATATTGCATTCCCTGCTAATCATACTTGTGCTCTATCTGTTGATAGAACAAATACATAATGAGAAACAGCCACTGTGCTTTCAGAAGAACACACTTGAAAGAATTTGTTCTCAATAAATTACATCTGCATCTGGATCCATATGAAGAAATACGTTCCTCTCATTCAGGCGTGGCTATTTTAAAATAAAATTTGGGCCGGGCACGGTGACTCACGCCTGTAATCCCAGCACTTTGGGAGTCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCTTGTAGTCCCAGCTACTCAGGAGGCTACTAGGAGGAAGGGAAACAGTATGCACAGTGGGTGAAACAGTATGTGCAAAGTGGGTGGTGGGAAGGTTTAGCTCAAGGTCCTTATATGGGGTCGGTGGGGAACTGCGGTGATGAGGGCAGATGGATAGGCTGGGCCGTGGTGTGGGGGCCTGACTAGGTGGGGCTGTCTCGTCTCCATCGTGACATCTCTCCCCGCCCTTCCATGTTGTCATGGCCTTGCCTTACCTCCAGGTCCCTGTCTCTAGTTTTGGATACCTCTCTCATTATTACCTGTTCCCTCCTACCCCATCTCCCCGACAATTAGCTGTTCACTCTGACCTTGTTCTTGAAGGTTAGACTTGGAGGGGTGTGTGCTGGGAGTCTGTGGCCAGTCTGGGACCAGCATTTGTTTTAGGCCTCCCAAAGTCCACGTCAATTGTGCCTTTCTCCAAAGTTCCACTAGCTGGACCCCACTCTCTCAGAGGCCCAGGCCATTCTCCCTTGAGGGCCCACAAGGCCTGGGATCCCCAAGCCCCTTTCACCTCTCTCGCCTTTATCTTAGGCTAGGTGCTCCACACGGGAACCTGCATTGGTGGCCCCAGCTGTGTTTCCACAGAGGGACTTTGCCTTTTTCTCCTTATTTACTTATTTTCAGAATGTGGTGTGTTGAGCACCCCCACCATCTCCCACCCCTGCAAGCATGACCAGGTGGCAGCTGTAGTTCCTTATCCTCCTCCAGGCTTTGGGGCAGCAGGACTGCAGCCTCCATAACCTGCAGCAGCTTGGGGAGGTGGGGCCTGGGCTGCAGGCCCAGATCTGGAGGCTAGATGCTGAGATTCAGACCAGGGACCTGGACAGCTCCTCACCACACTCAGTTTTCCTTGGGCTTATGGGTGGGCCTACCCCACAGGATGGTCTGTGCCACTTTTTACAAATGCCAAGTTGTGAGGAGGAGAGGAGGGTGCCTGAGCTTGAGGCTGGTTCAACTCTCAAAGAGCTAGCAAGGCTGGGCCGAGGGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACTATCCTGGTTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGCAGGCACCTGTCGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTTCACTCTAGCCTGGGCGACAGCACCATCTCAAAAACAAAACAAAACAAAAACAAAAAACAAAAAAAGAGCTAGCAAGGCTGAGATTGAGCACAGACTGGTCAAGCCACAGATAACGCACTTGTTCTTGCTGGTTGGCAGGAAGAACAATGGCTTGGCTGATCATCTTTTGCTACCTATTAAAATTGGTTTTATTTTGGCCGGGTACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTGCTAAAAATACAAAAAAATTAGCTGGCGTGGTGGCAGGCACCTGTAGTCCCAGTGACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATAGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTTAAAAAAAAAAGTTAGTTTTATTTTCTAGGGAAGGCCCTGCTGGGGTGGAGGGAGACATCCTGGGGCAAAGTGGGTGCTAGGTGAGGAAGTCAGCCTGTGACACAGCTGGGATCAGTTCCACCCAGCAAGACTTGCTGTGTGCTCCTGAGCAAAGTGTAGCTCCTCTTGGAACCCTTGACTCCTAATCTGCAAAATGGGAGGACTTGAATTCTATATGTGGTTTTAAACCTTTTTTTTTTTTAAGCTGTGGAGTCATTTTCCACAAAAGGATTCCACAAAATCTAAGCAAAATCTTACGGAAAAGCCTAAGAGAAAGAAAAGCAAAACTTTGCCTGAAATGAGGTAGGGATCCTGGATGGGTCCAATTGGCATCATCCTGCCCACACTTCACATTCAACCAGTGGCCTTGAAGGAAGATGGTTTGGAGCAACCCAGAGCTCTCTGCAGATGCATTCACGTTGAGACTGTATGCTGGGATGGAGGGTTCTGGCAGGTTCTGACCAGATGACTGAATGCCATCAGCATTACAGTCACCCCTTGGTTTATGAAGGGGGTTGGCTCCAGGACCCCAACTTGTACTGCGAATACTCAAGTCCCACTGTTGGCCCTGTGGAACCTGTAGATACTAAAAGTCGGCCCTCTGTATATGTGGGTTTTTGGATCCATGTTGGATTGAAAAAAAATCCCCAAATCCCCATATGAGTGGACCTACACAGTTCAAACGTGTTGTTCAAGGGTCAACTGTGTATGAAGACTGCTCCATCTGTGGTGGACAGTGAGGCTTTAGAAAGAGGAGACAGGCAGGCTAATGGATGGTCTTCATGGGTGTGGGAAAGGAGGAGTGGTCACTGGGCGCAGGCAGTTGGTCTGTGGGACCAGTGAGGCATGGGCTGTGGCTGGCAGTAGGAAAGCGGGAGAGGCTGAGTGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAAGCCAAGGCAAGAGGCTTGAGCCTGGGAGGTCCAGGCTGCAGTAAGCCATAATCATGCCACTGCATTCTAGGCTGGGCAACAGAACAAGACCTTGTCTCAAAGACAACAAAACAAAACAAAAACGGGGAGAGGAAAGGACCCAAGAGATGTTCCAAAAAAGAATTTCAGGAAACAGTGAAAAGTTGCAAATGGGGCATCAGGAGCCAGGAGCAGAGATTAGGTGGCAGGCAGGGGGTGCAGAAATGACAAGTTCTGTCTGGAACAGATGAAATTTGAGGTGCTTGTGGGACCTTTGAGTGGGCAGAAGCGGGGGCTGGAGACAAGGGTGTGGGAAAACTGTGATGGGGGTTGAGGGTGGAAATCGGGCCGGCAGAGCCTCCGGGGCAGAGAAAGTCCTATGGGGTGACCAGATGAGTTGAGAACTGGGTGGGTGGGTGCAGGCTCAATGGAAGCAGAAACTCATGGATATTGACTTACATGGGAGAAGGGGAATGGATGGGGGTCGCAGTGGGGTGGCAGGGCTCTCTTTTCCTTGTTTTTGTTTTTTTGCCCTTCCCTCTTCTCTTACTTTTCCGTGAGGGCTCCCCAGGCTCAGGAGAGATCAGGGTGGAAGGGTGACGGCCAAACCAGGGAAGGCTCCAGGTGGCTGAAGCCTGGTCTGTGCCCAGCAGGGCCCTGGCGGGCTGTTCCTCACTCCACCGGGCAGGTGATAACTGGTCAGAGCTGCCTCCCCACAGGTGCTGGAGGTAGGCTGGGAGGGCCGGTGCTCCCTGATGTGGACAGGGGGAGGGGTATTGATAAGAGGCGTGGAGAGATCCCTAGAGATGCAGTCTGTGGCCCTGGGTTCCAACCCAGTGTGCCACCACCTGGCTGTGTGACCTTCAGCAAGTGCCATTATTTCTCTGAGCCTGTTTGTTTATAAAATGAGGAAGAGTTGGCACAAGTTTGAAAAGATTTCTCAGGCTCCACCCGGTTCTGAAATTCGGTAATTTCCCAACTAGGGTGCACTCCCCCTGTAAGGGGCTGGGGAGGGGACGGTGCGAAACCAAGTTCAGCTTGTGGAGCGGAGCCAGAGCTGTTGGCCGAGCTTGGGCCTGGCCAACGCCTGCCCTCGGGAAGGTCCTGTGTAGGGAGACTGCCTGGAGGGACTAAGCGAGGGCTCTAACTGACGTCTCAGGGGCAGCCTCTCAGCCTGAGACCCTGCTGGGGAAGCCGCGTCCTGTGCACTAGCTGCGCCTAGGGCTGAGGTGAGGGCGCAGGCTCCCCAGGGTGTGTCCGAATTGCCCGCCTCAGCCCGCGGCCTGTCCTGACCGCCCAGCAGCGGCAGCAGCGACACCCTAGGGCTCCAGGAAGGGCTTGGGAAGGTGTAAAGGCGGGGCTAGGCTCGGAGGGAGCCGGAGGGACCGGGCGCGGTTGGCTCCCGGGAGCAACTGGAGAGTGAGGAGATCCTCATCCGGGGAAGCCCCGCGGCCGCGTCTCTACAGCGCCCCTTCTCGGGCTCTGGCCCTCCCGCTGGTTATTCTGGACCTGGGGGCCCCCAGCTGGGACCCGAGTCCGGTGCGGGGAGCCTAGTGGGCCTGGGAGCTGCTATTTTTAGCGGGCGCGGCGGGCGCGAGGAGCCTATTTATAGATCAAACAATCCGCGCTCCCTGCGTCAATGGAACCCCGCGTGCGTCACGCGCGCAGACATTCCAGGCCCCCCCTCCTCGCCCCGCCCCCTCGGGCTCCCCGGGCCGCACCTCCCCCTGGCCGCCTCCCGCCGGAACCGCACCGCCCCCCGCGCCCTTGTATGGCCAAAGCTCGACGGGCGGCCTGCGTCAGTGGCGCCCCCGCCCCTCCCCGTGCGTCACGGAGCGCTTAAGAGGAGGGTCGGGCTCGGCCGGGGAGTCCCAGTGGCGGAGGCTACGAAACTTGGGGGAGTGCACAGAAGAACTTCGGGAGCGCACGCGGGACCAGGGACCAGGCTGAGACTCGGGGCGCCAGTCCGGGCAGGGGCAGCGGGAGCCGGCCGGGTAGGTTCCCTTCGGGGAACGTGCATCTGTTTTTAGGAGCGGTGCATGAAGGAGATGGGTGTACGCGCGGGCAGAGAGGATGTTGTAGGGCCGGCATGCAAGAGGGTAGGTGTAGTGTGCAGCTGTAGCACAACGGGATGAGAACCCAGGTCAGACTGGAAACTACTGGGTGCGGGGTAGGAGGTAGGGGAGGTTGACTACCTGCAAAGTGGAAGCTGTAGGGGGTTGGGGTTGGCGCCGGGAGTAGGGACTTGTCCAGCAGGCGGCTGGCCTTAGTTCAGTCTCCTAGGGTGCCCAACTGGGCGCACGGTGCTCTGAACTTGGGTGGGTGTGGATGGGGGTCACAGCACCGTGGGGGAACAGGTACACAGAGCTTTGGCGCTGCTGGGATCCGTACGATTCTAACTGGGATTGGATTTCCAAAAGGCCCTCCTTCCTCCCAGCCTGTCAGCTCCCTCCCAGTGTCCCGGTTGTTTTCTTAACACTTTAGAGGCTGTGGCTGAGTTGGCAGGGGTTCCCCACCCTGAACTTTCTGTCTGAGGTGCGTTAGGAAGCCTCCGGATCATTGAAGGAAGTGACTGGCTTGGTGGCTGACCTGTGGAGGGCTGCTTGCTGTGTATTGAATAAAGGAGGCTTCTTGGGGTCGGGGCAGGGTCTCTGTAAGCACAGGGAGAATTGATTTCGCTGGGGCTTGGATCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGACAGAGGTGGAAACCCTTGTCCTTGGGGATCCTGGATAGAAGTTGCCAGTGTTGGAGTCTTGGGGCGGTGCTGCCTAGAGGATACCTCCCAACCATTCCAGCTCCAGATGCTGATCATCCCTATGCCCCCTCCCCCAGTAGTCTCTGTTGGATCTTACAGGTAGGGTGCAGCCTGAGGCTTGTTCAGCAGAACAGGTGCAAGCCACATTGTTGCCAAGACCTGCCTGAAGCCGGATTCTCCCCACTGCCTCCTTCAACCCCGCCTCTTCCTCCTCCTGTGGGACTGCTCCCCCCTCCTGTGAGGCTAGATGTAGGTCCATATCTTGTGTTGTTAAGAACCTGCATGAAGGGGGAGGGACTGATGGGGGTTGATCCGGATGTGGGACGTCCAGGTGGAGAAACAGGATTTGAATAAGGCAGGAACAAGCGCCCAGTTCTGCCCAACTGCTGTCTTTCCTCCTTCACCCCCAGCCCATCCCTGGCCAGGCTGTCCTAGTGCAGGCAGATGTGGCCACCCTCACCTCTCGCAGGGTGCTGCATGCCTGTGGACTGGTGCCACTGGGTGTGTGGGGCCTGAGCTACAAGGGTCTCTGTTGTCTTGGTTGTCAGGCTAGGGGTGGAGGTGCCCTGTTCAGGGCCTGTGGAGTTAGAAGGAAGGCTAGGACCAGAGAGGACTTCCTGGGCTCTTGGCCAGGAGGTGGTGACAGCCTTTGCCCCCATCACTGCACCCCTTGATTATGGTACTCTGTTCCTGCTTGATTTCTTCTCCAGCTTCCCTCATTGACTGGTGAGGCCAGAGTTACGCAGACCCCAGGTGTGTAGGTTGGGAGGGAGACTGTCCTGGAGCCTCCTCTGCATTATTTTTTGACCATTCTGTGAATGTAAGGATCTGCCTGAATGATGCTATCTCTGTTCAGGCTCTCTTCAGGCTCCTCGGGACTGGGGCTGTGTAACCCCCTTTGCCTGAGCCTCTGGATTCTTCAGGGCACAGACCCTGCTTTAGTGGAGGGACCCAGGCAGGGGCAGAATGTCTTCCACCCACCCACCAGCAGGCTTCTCCTTAAGTCTTCTGCTGGACTCTCAGAGTTCTCTTATTAAGATAACTGGGGGCAGCAGAACATTCTTTTTAGGTACTGTTGTCCATTCTCCTGAGAGTCCAGGGGGCTGTGGTCTCCTTCCTCCCCCCTTGCCCTGTCCCCAGCAAATGGCCTTTAAAGGTCTGGAGCCAGGTTACCGATGAGGAGGCCTAGGTTCCCTTCCTCTTTGCTTCTGGGAGCATCTCGAGCAGTGCAGAGTGGCTTCCCAGCCCCAGATGGCAGGATTGGGGTGGGTTTGGGATCTGCTGCCTTTGCTCAGTGTGCAGGGTTGGGGTGGAAATGGGGGACAGGCTAGGGCCTCTGCATTAGGCTGCCTTCTTAGGCAGGTGGGCTTTCACTTCCAGCTCCTCTTCCATTTTCACGATGTCCTTCTTCCTAGGCACTGCGAGGGGAGGAGAAAAGGGGCTTTGCAGAGGCCTGGGAGTATTCCCAGGAAGTGCCTGGTTGGCGAAACAACCAGGGAGCTGCTCCTGGGAGCTGGGCTGAGGCTTTGCTGGGCTGCCTCTCCCACTCACCCTTCTCCCGGCCCCCACCATGCCTTCCCCATGGGGGAGGGGCAGGGGGCTGGAGGAACACAGCTTCCCCCTGTTCTAGCAGAGAAATGCTGGCTGTATGCCTCCCCTAGGGTTCCCAGGCTGACTAGGGTGTGGCTGGCCTTCTGATGGAGCCCACTCATGCTGGGCCGCTGCCCAGGGGCTTTGTGGCACCTAGGTCGAGATGGTACTCAGGCCAGGGGTCAGGATTCCTGGGTGCTCTGGTCCCGGTGCCTCTGTCTCATCTTTAGGCTGGGATTCCTGCCACCTTGCTGCTCTGGGGCCCAAATACTTTGAGACAAGGCTATAGGCTTGTCCCACTGACTCTCCTTTCCCTCCCTGGGGTCTCCTCTCTCTCCAG
Seq C2 exon
AGATGCCCTGTATCCAAGCCCAATATGGGACACCAGCACCGAGTCCGGGACCCCGTGACCACCTGGCAAGCGACCCCCTGACCCCTGAGTTCATCAAGCCCACCATGGACCTGGCCAGCCCCGAGGCAGCCCCCGCTGCCCCCACTGCCCTGCCCAGCTTCAGCACCTTCATGGACGGCTACACAGGAGAGTTTGACACCTTCCTCTACCAGCTGCCAGGAACAGTCCAGCCATGCTCCTCAGCCTCCTCCTCGGCCTCCTCCACATCCTCGTCCTCAGCCACCTCCCCTGCCTCTGCCTCCTTCAAGTTCGAGGACTTCCAGGTGTACGGCTGCTACCCCGGCCCCCTGAGCGGCCCAGTGGATGAGGCCCTGTCCTCCAGTGGCTCTGACTACTATGGCAGCCCCTGCTCGGCCCCGTCGCCCTCCACGCCCAGCTTCCAGCCGCCCCAGCTCTCTCCCTGGGATGGCTCCTTCGGCCACTTCTCGCCCAGCCAGACTTACGAAGGCCTGCGGGCATGGACAGAGCAGCTGCCCAAAGCCTCTGGGCCCCCACAGCCTCCAGCCTTCTTTTCCTTCAGTCCTCCCACCGGCCCCAGCCCCAGCCTGGCCCAGAGCCCCCTGAAGTTGTTCCCCTCACAGGCCACCCACCAGCTGGGGGAGGGAGAGAGCTATTCCATGCCTACGGCCTTCCCAGGTTTGGCACCCACTTCTCCACACCTTGAGGGCTCGGGGATACTGGATACACCCGTGACCTCAACCAAGGCCCGGAGCGGGGCCCCAGGTGGAAGTGAAGGCCGCTGTGCTGTGTGTGGGGACAACGCTTCATGCCAGCATTATGGTGTCCGCACATGTGAGGGCTGCAAGGGCTTCTTCAAGGTACCGCGCAGCCCCAGGTGGGGCCTTTTGTTGGAAATGGAGAGAGGCTGGCCTCATCCCATTGGGACCTGTGGTCTCCCCCTGGGTTCTCCTCCTAGCTAAGTCCTGTCCTGCAGGGTGGGATCAGCCCTGCCAGGTGGGCCGCCTTCCTGGAGACCCGTAGATGCCAGGGCTGGAAGCTTTCATTTGCCGGGACACTCGGGCCCATGGGATTGCACAGAGCTGGAGGGAGGGGTGAGATAGGGGCAGATAGGAGCTGCAGGGGTGCCTGGCGAGCCTCTGGTTTTCCTCTGCTCCTCTGCCTGTCCTCTCCCAACTCAAGGTTCTAGTGGGAAGGGGTGCCCCCAGGCTCTCATGTTCCTGGCGTGAGATGAAAGGATCCCTGCGGAGGGTTTGGTTCTTGAGGGCTGGGGGTGGACTTGGGAACAGGCTGTGTGTTTGTCCCAGCGATGGTGCCTGCTTAGCTTCCCGTCCCCACCCCCCAGCCCCTTGGCCCTCTCCTGTCTGCCCTAGGGAGAAGGCAGGTGGACAAGGGCCCATGAAAAAATACAGGTGTCTAGACTGCCAGGGAGACCCTGGCCCCCAGTAGTGTGTCCTGGGGACTTCCTCAGAGCGAGAAACCTCCCCCAATGTCTTCAAGACTTTTCTCTCCCCCCGCCCAACCCCGTCTCTCCCTCCCTTGCCACCCAAATGTTAGAAAAATAGCTGTGAACAGAGAGCGCTTTTGTCTGCAATGGCAGCAGGATCTGGACGGTCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000123358:ENST00000478250:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.553
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0010513=zf-C4=PU(38.6=9.2)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development