HsaINT0187782 @ hg38
Intron Retention
Gene
ENSG00000180626 | ZNF594
Description
zinc finger protein 594 [Source:HGNC Symbol;Acc:HGNC:29392]
Coordinates
chr17:5180078-5191883:-
Coord C1 exon
chr17:5191748-5191883
Coord A exon
chr17:5184277-5191747
Coord C2 exon
chr17:5180078-5184276
Length
7471 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGA
5' ss Score
7.66
3' ss Seq
TGATCTACTTATCATTTCAGATT
3' ss Score
8.62
Exon sequences
Seq C1 exon
AGTCCCGGGGAGCGCACCGGAAGTTCTCGCCTGGCCCAGGCGCGGGGTCCAAGATGGTGGCGCTAGGAGCCGCGACCCAGTGATAGCGGCCGTGGAGGGGCCCCCGACCGAGCGGGAGGTTGGGGGTAGCCTGGAG
Seq A exon
GTGAGACCCCGCTGCGTTCACAGAGCTGGCGGCCGCGGCGCCTGCGTCCACCGGCAAGCGAGGAGTGGAGCAGAGCTCATATGCCTATGGGGAGAGGCCTGGGGGACCGCAGGAGGATGTAGGCGCCGGGTGCGCATGACTGGGCCTTCTTGCTCTCGGTCGGCTTCTTGGTCTCGGCGTGCCCCATTCCCGGCCCTGTCCCGCTACTCTTGCCTGTTCCAGTTCCCTCCTGTGGGTACCGCTAACGGCATCTTCCCGAGGCCCAGAATCCACCGTCAGGCATAAATTGATTATTCCTCGCCCACATCTGTGCCAGGTATATTTGTATATGTAACCAAATCTGGTTTTTGCATCCCACGAGTGACCCCGCTGGGGAGGCTAGACTAAGCCACAGGAATGAACTGTATTGTTCATATATGTTCTACTACTCAGTCTAAAATATTAGGACTGTTAGAGTTCAAACAAGGGAGGGATTTAGGTGGGCTGGTCTCTTTGTAAGGGTCTACATTGCTTTTAGGAGCAGCTTCTATTGTGACCAAGCGAGTTACAGAGAAACGCCACACTTTGAGACAAATTAAAGAGTCCTTATTAGCCGGCAACCGAGAGGCAGCTAGCGCCCAAAATTTTCTCGGCCCTGAGGAAGGGGCTAGTTTTGTTTTTATACCGTGGTCTAAATAGGGGAGGGGGGATTTTAGCTGAAGCAATTTTTACAGAAGCAGAACTGGCAAAAAGTTGAAAAATTAATTGGTTACAAATGCAGTTACAAAATATAAACAGTTCCAATTGCACGGGCTTAAACTATCACAAAGAGATAAATGCAGGGGTTTTGCTTGCCATCCACCGAGCGCGTCCCCAGGAGCTGCTGGTGCAGCTTGCCTCAATATCTTATCAGTAGGTGCATTCCTGGACGTGCTTTGAGTCAGTTTACACTAGCTATGCCTTAAGGGAGGGAGGTGAAAGGGGGCTGCCAGTGGAGAAACTAAAATGGAGTCTGTCCGGCTCTCTCTCTGCTAGGAGAGAGTCACTCAGGTTAAAACAAAGTAGGGTATCACACTTCAAAAGTCATTTCTTTTGGGAAGCCTTCCCGGATTGCCACCGCAGCGCTTTTAGCATCTAATTCATAGGCTCTTACTACCTTGTTTCATGTGTGAGTCTTCCTCTAGGCATAGATTCTTTGTTTAGCTTCACCTAATGCGTGCCCATGAATGTGAATTAAAAAGGATTGACATAGTTAAAAGATACTAAGAACTGGGCATGAAATAGTGGCATTTCTTAAGTTAAAAAATAGTGGCCCCTAGGCCAGCTTTGAGTGTAGACACATTTTCTTGGCTCATGCTGTTTGTTTTTATTTGAATTAATGGCCAACTTCCTTTTTTTTCTTAAGACAGAGTCTCGCTCTGTCAACAGACTAGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCCAGCTAATTTTGTATTTTTAGTAGACACAGGATTTCTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCAACCTCTGGTACTCTGCCTGCCTCAGCCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACTGCGCCCGGCCTGTGTTTGCTCTTTTCTTTAGGAACACTAATTATATGTATTTGATTATCTTTCTTTAGTTACTGGTTTTCTCTGTAATCACATTTGTATTCATTTCATTTTTTATTATTTCTCCAGGCCTCATTGTGACCTTGTAGTGATTATTTTTGTTGTTCCTTATGTGAATTTCATCTACATAATGCTTTTTATTTGCCCTTCCATTTCTTTCCTCAGCATTGTCAAATCACTTCTCACTACTTTTTATTGTTTTCTAATCTAATTTGTTTTTGGCCAGGCATGGTGGCTCATGTCTGTAATCTCAGCACTTTGGGAGGCTGAAGAATCCCTTGAGGCCAGGAGTTTGAGACCTGCCTGGGCAACATAGCAAGACCTTTTCTCTACAAAAAAATTATTTAAACTAGCTGGGTATGGTGGTGTGCCTATGGTGTCAGGCTGAAGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAGGTTGCAGTGAGCTATGATTGCACCACTGCACTCCAGCCTGGGTGACAGAATGAGAGCATGTATGAAAAAAACAAAACAAGCTGGGCACAGTGGCTCACGCCTGTAATGCTAGCACTTTGGGAGGCTGAGGCAGGAAGATCCCTTGAGGCCAGGAGTTCCAGAACACCCTGGACAACACGGCAAGCCCCATCTCTACAAAAACTTAGCCATGTGTGCTGCAGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATCATCTCAGCCTGGGAGGTCAAGGCTGCAGTGAACCATGATTACACCACTGCACTCCAGCCTGGGTGACAGAGACCCTGTCTCCAAAAAAAAAAGTGAAAAAAAAATGGCCTGGCACAGTGGCTCACACCTATAACCCCAGCACTTTGGGAGGCCAAGGTGGGAGGATCACTTGAAGCCAGGAGTTCAAGACCAGCCTGGGCAGTATACTGAGGCCCCATTGCTATTATTTTTTCCTTTCTCTTTTCTTTTTTTTTTTGGCTACATGACTCAATATTTTTTTTTAAATTAAAAATGTCAAATTTTTGGCTGGGCGTGGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAATGTGGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCTGGGCGTACTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCATTGCACTCCAGCCTGGGTAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGTCAAAATTTTAAATGTAAATGTGTAATCTGTTTTAAACCCTTATATCTCTTCTTTAGGCTTTTATTTAAAGAGTTATTTTGTCTGAAATTTCTTTGAGATAATGGAGAATTCTCTGCTGAATGTTTCCTATTAATTTCTTTGTATTCTTCATGGATGTATGTTTCTGTTGCTGATGTTCCTTTCTTTCCTTTATTCTTCCCTGAAAATGTGTATTTTTTTATTTTAAGCATACATCCCACAAATTTATCTTAACAATTACTACTCAATAATGAATGAAGCAGGCTCTTTATTAAAAAGTACTATGGGAACAAACAGAGGAAATTGAGCCCAGGCACTTGAAAGCCTTCATACAGATTTGCTGCCACAAACGCCTCATCAAATCTAGAGGCATACCTTCCTTCAGCTTCTGGCTTTCAAGACTTCAGTATGACACAATAAAAGCCCTTCAGATCACAAGTTTTTTGTGAAAAAAAAAAAAAAAGGGCAGCCTTTAATCTACTATCTTTTAAATAGTAATCTGCTCCTGAATTTTGAACTCTCTCTCTCTATATATATATGTATATCGAACCAAAAAAAAAAAAAAACACTAAACACTTCAAGGGAAAATTATGACAAAGCCAATTCTCTCCAATAATAAAGGTCAGGGATTTGATAATATGGGCACCCAAAAGCAGTAAGGCCACTGTCTTTCAGTTGCAGGAGAGGGTATGGTATTTAAATGAAATCCAAGGCCAGGTGCAGTGCCTCACACCTGCAATCCCAGCACTTTGGGAGTCCAGGGCAGGATGGCCTGAGCCCAGGAGTGTGAGACCAGCCTGGGCAACATGGTGAGACCATATCTCTAAAAAAAAAAAAAAAAAAGGAAATCCAGCCTGGATATGGAGGTCTGTTCTATGGACACATTACTTAATATTAAAGGGTAAGTATTAATAGTAATAATAACAGCAGCTGACACATAGTGCTTTCTGTATGCAAAGCACTGTTCTAAATGTTTTATGTGTATTTATATATATTTGATTCTCATAACAACTCTATGAGGTAAATACTATTATTATCTCCATTTTATAGATGACGAAGCTAGGGCACTGAGAGCTCCAGTGATTTGCCTGAGGTTTCCCCATCATTAAGTGGTGGAGCCAGGTTTCAAACTCAGGCAGTTTGCCTTTCAGTCCATGCTGTTAATCACTGTGCCATGTTGCTGCTCATTCACTCCAAGAAGATTAATGACTAGAGTCCCTATCAGCAGGACCAAAATAAAATGACTCTCCCAAGGAGCTCAGAAATGTGTTTTTGTGACTGACTGATATGGTTTGGCTCTGTGTCCCCACCCAAATCTCATCTTGAATTGTACTTCCATAATTCCCATATGTTGTGGGAGGGACCTGGTGGGAGATAATTTGAATCATGGGGGTGGTTCCCCCATACTGTTTTCATGGTAGTGAATAAGTCTCATGAGATCTGATGGTTTTATCATTGGTTTCCGCTTTTGCATCTTCCTCATTTTCTCTTGCCACCACAATGTAAGAAGTGCCTTTTGCCTCCTGCCATAATTCTGAGGCCTCTCAAACCATGTGGAACTGTAAGTCCAATTAAACCTCTTTTTCTTCCCAGTCTCGGGTATGTCTTCATCAGCAGCATGAAAACATACTAATACAGTAAATTGGTGCCAGGGGTGCTGCTGAAAAGACATCCAAAATGTGGAAGCAATTCTGGAGCTGGAGAACAGGCAAAGGTCGGAACAGTCTGGGGGGCTCAGAAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTTCTAGAGACTTGTTGAGTGGCTTTGACCAAAGGCCTGACAGCATTATGGACAATAAGGTCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTCGGGAACTGGAGCAGAGGTGACTCTTGTTATGTTTTAGCAAAGACACTGGTGGCATTTTGCCACTGCCCTAGAGATTTGTGGAACTTTGAACTTGAGAGAGATGATTTAGGGTATCTGGTGGAAGAAATTTCTAAGCAGCAAAACATTCAAGGTGTGACTTGGGTCCTGTTAAATGGATTCAGTTTTATGAGGGAAGCAGAGCATAAAAGTTCAGAAAATTTGCAGCCTGAGAATGTGATAGAAAAGAAAAACCCATTTTCTGAGGAGAAATTCAATCAGGCTGCAGAAATTTGCATAAGTAACAAGAAGCTGAATGTTAATCCGCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAAGTCTTCACAGCAGCCCCTCCCATCACAGGCCTGGAGGCCTAGGAGAAAATGGTTTTGTGGGCCAGGCCCAGGGTCCCAATGCTGTGTCCAGCCTAGGGACTTGGTGCGCTGCATCCCAGCCGCTCTAGCCATGGCTGAAAGGGGCCAATGTAGATAGAGCTCAAGCTGTGGCTTCAGAGGGTGCCCTAAGCCTTGGCAGTTTCCACATGGTGTTGAGTCTTTAGGTACACAGAAGTCAAGAATTGAGGTTTGGGAACTTCCACCTGGATTTCAGAAGATGTATGGAAACGCTTGGATGCCCAGCCAGAAGTTTGCTGCAGGGGCAGGGATCTCATGGAGAACCTCTGCTAGGGCACTGCAGAAGGGAAATGTGGGGTCGAAGCCACCATATGGAGTCCCTACTCGGGCACCTTCTAGTGGAGCTGTGAGAAGAGGGCCAATGACCTCCAGACCCCAGAATGGTAGATCCACCTACAGCTTGCACCGTATGCCTGGAAAAGCTGCAGACACTCAACACCAGCCCGTGAAAGCAGCCAGGAGGGAGGCTGTGCCCTACAAAGCCACAGGGGTGGAGTTGCCCAAGACCATGGGAACCCACCTCTTGCATCAGCATGACCTGGATGTGAGACCTGGAGTCAAAGGAGATCATTTTGGAGGTTTAAAATTTGATTGCCTTGCTGGATTTCGGACTTGCATGGGCCCTGTAACCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAACAGCTGTATTTACCCAGCAATACCTGTACCCCCATTATATCTAGGAAGTAACTAGCTTGCTTTTGATTTTACAGGCTCATAGGAGGAAGGGACTTGCCTTGTTTCTGTTGAGACTTTGAACTGTGGACTTTTGGGTTAATGCTGAAATGAGATGAGACTTAGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAATGTGAGGACATAAGATTTGGAGGGGCCAGGGGCAGAATGATATGGTTTGGCTCTGTGTCCCCACTCAAGTCTCATCTTGAATTGTACTCCCATAAATCCCATGTTTTGTGGGAGGGATATGGTGGGAGATAATTTGAATCATGGGGGCAGTTTCCCCCCTACTATTCTCATGGTAGTGAATAAGTCTCATGAGATCTGATGATTTTATCAGGGGTTTCTGCTTTTGCATCTTCCTCATTTTCTCTTGCCACCACCATGTAAGATGTGCCTTTCACCTCCCACCATGATTCTGAGGCCTTCCCAGCCATGTGGAACTGTAAGTCCAACTAAACCTCTTTTTCTCTCCAGTCTCAGGTATGTCTTTATCAGCAGCATGAAAACGGACTAATCCACTGGGGAAGGTCAGGGATTTGATAACGTGGACCCTCAAAAGCAATAAGCTCATCTATCTTGTAATTTCAGAAGAAATCAAATTGCCACACAAAAGGAGGCAATTCCATCAGAATATCAGAAAGAAAAATGTGAGGTCTGAGAAGAAGAGAATTGATTTCTATTGAAATGACAGCCAAACGTTTTTATTCTGAGGCATAGTACAGATTTGCTTAACTATCATGATATATAGGGAGGAAAGAGCAGTATGCTGGTTATTAATTTATTGCCTCTCAACTCCAGATCCACCCATCTTTGTTTGCTTTTGTTACAAAGCTGGATTCTGTAAACATTTCTCCTTTGCCAGTTCGTACAAGATTTGACTTTGTCAACAGAGGATGCTGGAGGGACAATGCGTGGCCATGGGAAGAGAAACTAACTTCCTGGTACCGGTGTGCTGTTCTATTTTTATTTATTTATTTTAATTATTTACTTATGTGGCTGCTAGCAGATCAACTTGTGGGAGGCCTGGTGGCATTTACCCTAGTGGGTTGCTTCCTGTGAACCAGTTCAGGCCCAGCCACACCATCCAGCAAGTTCCTCCCCCATCCAACAGGCCACTTCCTGTGGACCAACTCCAGATTGCCCTCCTCCCCCAGTGAATTAATTCACCACCCTTTAGGCCACTCCCACAGCCCAGCTCCAGCCTGCACCCTGGCGGGTTTTTTCACCAACAGGGTATGTGGTAGCACAGGTTCCTGTGTTAGCCACAGTGTCGCTAGTGAAAGCCACATCTCAGCTTTGGCAGGGAAAGGTCTTCTGAGTTCTTTGTTCCTCCCTCTTAGACTGCCCAGTATAATGAAGAGATGATATTTGTATTTTAGGAATTATAGAATGATCTACTTATCATTTCAG
Seq C2 exon
ATTCTGAAGACAGGAATAAGATGAAGGAATGGAAATCAAAGATGGAAATTTCTGAAGAAAAGAAGTCAGCAAGGGCTGCATCCGAAAAACTCCAAAGACAAATCACCCAGGAATGTGAGTTAGTTGAAACCAGTAATTCTGAGGACAGATTATTGAAGCACTGGGTAAGCCCTTTAAAGGATGCAATGAGACATCTCCCTTCCCAAGAGAGCGGTATCAGGGAAATGCATATTATCCCCCAGAAAGCCATTGTGGGAGAGATTGGCCATGGATGTAATGAAGGAGAAAAAATACTTTCTGCAGGAGAAAGCTCCCATAGATATGAGGTTAGTGGCCAAAACTTCAAACAGAAGTCAGGATTAACTGAACATCAGAAAATTCATAATATAAATAAGACCTATGAATGTAAGGAATGTGAAAAAACCTTCAACAGGAGTTCAAACCTGATCATACATCAGAGAATTCATACAGGAAATAAGCCATATGTGTGTAATGAATGTGGGAAAGACTCTAATCAAAGTTCAAATCTTATTATACATCAGAGAATTCATACAGGAAAGAAACCTTATATATGTCATGAATGTGGAAAAGACTTCAATCAGAGCTCCAATCTGGTGAGACATAAGCAAATTCACAGTGGTGGGAATCCCTATGAGTGCAAAGAGTGTGGGAAGGCTTTTAAGGGAAGCTCAAACCTTGTCCTGCACCAGAGAATCCACAGTAGGGGGAAGCCATATTTATGCAATAAATGTGGGAAGGCTTTCAGTCAAAGCACAGATCTTATTATACATCACAGAATTCACACTGGAGAGAAACCCTATGAATGTTATGACTGTGGACAGATGTTCAGTCAAAGTTCACACCTTGTCCCACATCAGAGAATTCACACTGGAGAGAAACCCCTCAAATGTAATGAATGTGAAAAAGCCTTCAGGCAGCATTCTCACCTTACTGAACACCAGAGACTCCACAGTGGAGAGAAACCCTATGAATGTCACAGATGTGGGAAGACCTTCAGTGGGCGCACAGCTTTTCTTAAACATCAGAGATTGCATGCTGGAGAGAAAATTGAAGAATGTGAGAAAACCTTCAGCAAGGATGAGGAGCTTAGGGAAGAGCAGAGAATTCACCAGGAAGAGAAAGCTTATTGGTGTAATCAGTGTGGTAGGAATTTCCAGGGCACCTCAGACCTCATCAGACATCAGGTAACTCATACAGGAGAGAAACCATATGAATGTAAAGAATGTGGGAAAACTTTCAATCAGAGCTCAGACCTTCTGAGACATCATAGAATTCACAGTGGAGAAAAACCTTGTGTATGTAGCAAATGTGGGAAATCTTTTAGGGGCAGCTCAGATCTTATTAGACACCATCGTGTTCATACTGGAGAGAAACCCTATGAATGTAGTGAATGTGGGAAAGCCTTTAGCCAGAGGTCACACCTTGTTACACACCAGAAAATCCATACTGGAGAGAAGCCCTATCAGTGCACTGAATGTGGGAAAGCCTTCAGGCGGCGTTCACTCCTTATTCAACATCGGAGAATTCATAGTGGTGAGAAACCCTATGAATGTAAGGAATGTGGGAAGCTCTTCATTTGGCGCACAGCTTTCCTCAAACATCAGAGCCTGCATACTGGAGAGAAACTTGAATGTGAGAAAACCTTCAGCCAGGATGAGGAGCTTAGGGGAGAGCAGAAAATTCACCAGGAAGCGAAAGCTTATTGGTGTAATCAGTGTGGTAGGGCTTTCCAGGGCAGCTCAGACCTCATCAGACATCAGGTAACTCATACAAGAGAGAAACCATATGAATGCAAAGAATGTGGGAAAACTTTCAATCAGAGCTCAGACCTTCTGAGACATCATAGAATTCACAGTGGAGAAAAACCTTATGTATGCAACAAATGTGGGAAATCTTTTAGGGGTAGCTCAGATCTTATTAAACACCATCGTATTCATACTGGAGAGAAACCCTATGAATGTAGTGAATGTGGGAAAGCCTTCAGCCAGAGGTCACACCTTGCTACACACCAGAAAATCCATACTGGAGAGAAACCCTATCAGTGCAGTGAATGTGGGAATGCCTTCAGGCGGCGTTCCCTCCTTATTCAACATCGGAGACTTCATAGTGGTGAGAAACCCTATGAATGTAAGGAATGTGGGAAACTCTTCATGTGGCACACGGCTTTCCTCAAACATCAGAGACTGCATGCTGGAGAGAAACTTGAAGAATGTGAGAAAACCTTCAGCAAGGATGAGGAGCTTAGAAAAGAGCAGAGAACTCACCAGGAAAAGAAAGTTTATTGGTGTAATCAGTGTAGTAGGACCTTCCAGGGCAGCTCAGATCTCATCAGACATCAGGTAACTCATACAAGAGAGAAACCATATGAATGTAAAGAATGTGGGAAAACTCAATCAGAGCTCAGACCTTCTGAGACATCATAGAATTCACAGTGGAGAAAAACCTTACGTATGCAATAAATGTGGGGAATCTTTTAGGAGCAGCTCAGATCTTATTAAACACCATCGTGTTCATACTGGAGAGAAACCTCATGAATGTAGTGAATGTGGGAAAGTCTTTAGCCAGAGGTCCCACCTTGTCACACACCAGAAAATCCACACTGGAGAGAAGCCCTATCAGTGCACTGAATGTGAAAAAGCCTTCAGGCGGCGTTCACTCCTTATTCAACGTCGGAGAATTCATAGTGGTGAGAAACCCTATGAATGTAAGGAATGTGGGAAACTCTTCATGTGGCACACAGCTTTCCTCAAACATCAGAGACTGCATGCTGGAGAGAAACTTGAAGAACGTGAGAAAACCTTCAGCAAGGATGAGGAGCTTAGGGGAGAGCAGAAAATTCACCAAGAAGAGAAAGCTTATTGGTGTAATCAGTGTGGTAGGGCTTTCCAGGGCAGCTCAGACCTCATCGGACATCAGGTAACTCATACAGGAGAGAAACCATATGAATGTAAAGAATGTGGGAAAACTTTCAATCAGAGCTCAGACCTTCTGAGACATCATAGAATTCACAGTGGAGAAAAACCTTATGTATGCAACAAATGTGGGAAATCTTTTAGGGGCAGCTCAGATCTTATTAGACACCATCGTGTTCATACTGGAGAGAAACCCTATGAATGCCCTGAATGTTGGAAGGCCTTCAGTCAGAACTCACACCTTGTCAGTCATCAAAGAATTCATACCAGAGAGAAACCCTTTGAATGTAGCAACTGTGGTAAGGCCTTCAGTGGGTGGACAGCTTTTCTTAAGCACCAGAAACTTCACATTGGAAAGGAATTTGAAGACTGTAAGAGTCTACAAACAGGACCTATTCTAATAGGTAGCAGAAACCTAATGAATGCAGTAAAACTAGGAAAAGTCTGATGGAGACCACATCTTATTGCACTACAAATGAGTTTTATTAGAAAAAAACCATGGGAAGGTGGGAAAGCAGAGAAAATACCTACTGGATTTTTCAAACGTAAGTATAATCAAGTGGAAAAGCCAAAAGCTCTTGGACATAATCACCTTTTTTTTTTCTGTCTCAGAACTGACACTAGAATATGGTCCCAACGATACAATTTTTTAAATTATTTATTTTTTAACATACAAAGAGATGAGGTCTCACTATGTTGCCCAGGCTGGACTTGAACTCTTGGGCTCAAGCACTCCTCCCTCCTCAGCCTCCCAAAGGGTTGGGATTACCGGCATGAGCCACTGCACCAGCCCCAGGGGTCTAATTACTTGAGAATGTTTTAAGGGATGTCTATCATTATTAAAATCATTATAAATCACTTTGGCAACAACCCCAAAACTAAATTATTCATGGAAAGAGCCATTTCAATCTTGACTTCCTAGTCGAGTGACAAGTTTAAATGTGGGAAAAAACCCTGTGAAAGTAATGAGTGTAGGCCAGGTGCGGTGGCTCGTACCTGTAATCCAGCACTTTGGGAAGCCAAGGTGGGCAGATCACGAGGTCACGAGTTGATCATGAGGAGTTACTATGCCCAGCCAACATACTAAAACCCCGTCTCTACTAAAAATAACAAAAATTAGCCAGGCATGGTGGGGCACGCCTGTAGTCCCAGGTACTTGCGAGGCTAGGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCGGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAACAAGTGCGAAACTCCATCTC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000180626:ENST00000575779:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=2.8)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains