HsaINT1047709 @ hg38
Intron Retention
Gene
ENSG00000261221 | ZNF865
Description
zinc finger protein 865 [Source:HGNC Symbol;Acc:HGNC:38705]
Coordinates
chr19:55605405-55617269:+
Coord C1 exon
chr19:55605405-55605732
Coord A exon
chr19:55605733-55613592
Coord C2 exon
chr19:55613593-55617269
Length
7860 bp
Sequences
Splice sites
5' ss Seq
CCGGTGAGT
5' ss Score
10.9
3' ss Seq
CCCCGTCCTCCTCTTCACAGGGT
3' ss Score
11.74
Exon sequences
Seq C1 exon
AAGAGGCGGGCATTCAAAGCGCAGGCGCACCTGGCTCAGTTCGCCCACCGGAATCGGCCCGGGCTTTCACTGCTCGCGTCCCCGAGTCAGTGCGCAAGCGCATTTCCCCCCTCCTGGTCCCCGCCACCGCCTCCTCTTTCCGATCCTCCACGCCGGCGCCTCGGGAACGGGCGCGACTTCCGCTTCCGGGCGGGCGGGCAGGCGGGCGGTGCGGGGCTGCCGGGGAGGGGGGAGGGGGCGGCACTTCCGGTCGGGCCCTCGGGTCTCCCCGGAGCGGCGGCGCCTCCTCCGCCTCCTCGGCCTCCTCCCGGCGGAGACCCCGGCGCCG
Seq A exon
GTGAGTGACGGGGTGCGTGGCCCGGGGGCCCGGGTGCAGCGGGGGCGGGGGGCCCCGCCCTGGCCCGCTGTGGTCCCCAGAACGTCCCCCAACCCCTAGCAAGTCAGTGCAGCTCCCGCCGGGCCCTTGCCAAGGGACCCCCAATCACTGCTCCCCGGTAGGATCACTGCAGATAGCTCCCCCATGAACGCCCCCAGCTAGGATGGCTGCCAAAGCGCTTTCATTCGTGGCGATCCCCTAAACGGCTGCCAGGGCCCCCAAATGATACCTCCTCGTAGGATCCCCTCCACATAGCGCTCCCCGTCATTGCTTCCTCCAGGTCAGCCTCCAGATGCCATCAGCATTGCCCCTCCCCATGTAGGGCAGCTGCTCGTGAACCCTCTTATTAGTATCCTCTATATAATTCTCCCCAGAGTGTTTCCTTAGTGCCTTGCAGCAGAACTGTCCCCCGTTATCTCTGTCCATACAGCAACAGCCCCCAATGGCCCTGACCACCTCCCTCCCCAGCAGAACGCCCCTTCGTGGGTGTGAAAATACTTTCTATTCTGGTCAGCACCAAGAATGCCTTTTTCCCTTCTGCAGGTCCTCCAGTGATTCCCCTTAAGAATGCCCCTTTCAAAGCCACCCCCCCATCGCAGCGGCACAGCTCCCTCTAGAGTTCCTTCACACTCACATCCTCTCCCGCCTCAGGTAGAAATATCCGCCTGCTTAGCTCCAGGCTCCCATGACATACTCCCGTACCTCCTCTCACCCCACCCTCATCGCGGTCAGCCCGTCTTCATTACTTCTGCCACAGAACAGTGTCCCGCAGTGAGGCGGTGAAGCCTTCCTTCCCAGAATGTGCCTCATCCTCTTCCTATGGCGTGAACAACTGTTGCCCTGACCTGCAGCTTCTCACCCAGCTCTCAGGCTATCGTCCTGGACTCCCTAGGGAAGACCCTGGACTTCACTAGGGTGTGACTTCTTTTCTCGTAGGCATTCCTTCTGCGTTGAACGCATATTCACTATTCTAGCTGAAGGGTATAATATACAGCCACGAAGGGGGTCGATACACACAGTGTTCTCACTGTGCGGGGTCTCACAGTCTAGTTGATCAGACACGAGTCGACAAAGATACACGGGGTTTTGTGGGTTCTCTGAGAGCCTGATGAACTACTTTAGAGGTGAAAGCTGAATTACAAGTGGCAGCTTAGCCATGCAAAGATCTGGGTGAGCAGGCAGCAAGAACAACAAGTGCAAAGGCCCTGAAGTGGCGGTGAGCACGGTGAGTGGAGGAGCAGCAGGGGAGGCCGGTGAGGGTGGAGTGGAAGATTTGAAGGCAAGAACAAGAGGAAGGAAGCTTTGGTCTCAAAAGGCTTTGGAGGTGAGGGCACTGGGATAAATTATCTAGCCTTTGTCAGCTCTACCGAGCCCAGAATGTTCTTCATTCATTCATACGTTCATTCGTAAACACTGGTTGAACAACTGTTTAATGAGCACCTACTTTACATTGGGGGTACAACAGAGAACAAAATAGACAAGAATCCCTGTCCTCATGGAGTGGATATGCTAGTTGAGGGGGCAGATGATTAAAAGACAAAATACAGGCCAGGCGAGGTGGCTCATGCCTGTAATCCCAGCAGTTGGGAAGGCCAAAGTGGGAGGATCGCTGGAGGCCAGGAGTTCAAGACCAACCTCGGCAACATAGTGAGACCCTGTCTTTACAGGAAAAAAAAAAAAAAAAAAAAAAAGCTGGGTGTGGTTGGTGGGCACCTGTAGTCCCCAGCTATTCAGGAGGCTGAGGTGGGAGGGCTGCTTGAGCCCAGGAGTTCGAGGCTGCAGTGAAAAAAAATAAAAACAAAAACCAAGAGTATATGTGCGTGTTCAGAATATCACGGGATAAAGAGATAGACCTGGGGGGCTGTGGTTCAGGATGGCCTCCCCCAGGATTTTCCTATGTCTTGTCATCTTGTCCCTCCCAAAAGCCACACACCAAAAAGTTATACAAGAGTAAAAATTCCCCTTCTCCTGGACAACTGTGGCCCACTTGGGGGCTGCTCTTAACAGCGCCCTAACCCCAGGAGCGAAGTGATTGGGAGGATGAGCCCTGGATTCCACTAGGGTTCACAGCTTTGAGCAAATCACTCCCTCCTTTCCTAGCCTCATTCATTCACTTCTTCAAACAAAAATGTATCAAGCCAGGAACTGTTGTAGGTCCTGGGGATGGAACAGTGAGCAAGAGATAAAAATCCTTGCCTTCAGGAAGCCGATCATCTGGATGGGGAGACCAACAAAATCAAGGCAAAGAAGTAGATTATGTGAGGTTATAAATGATGCTGAGCAGTAAGGAGAGAAATGAAGCAGGGTTAGGGAGATGAGGATGTGGGCCTGGGTGACAGGTCATTGGTTACTGAGAGGCTCATTGAGAAGACAGTTGACCAAAGATGGGGAGGAGGTGAAGGGGTGAGCGAGATGGTTGCCTGAGAGTCAGAATATTACAGGCAACAGCAACAGCCAGCGCAAAGGCCCTGCAGCAGGAATAGAGTGGGCACATGGGAAGAGCAGCCAGGAGACTGTGGAGGTCATTGTAAGGACTGTGGCTTTTTTTTTTTTTTTTTTTGAAAAGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTAGCTCGCTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCCAGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATCCGCCTGCCTTGGCCTCCAAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGTCAGGACTGTGGCTTTTGAATGAGATGGGGTTACTGTTTGGTTTGGGACCGAGGATAGACATGCTTTGGTTATAGTCCTCCTGTCAGTAAAATGGGAATAATAATAACACATTTGTTGTGAAGTTTGAATGAAACAAGCCACATAAGGCACCTAAGTACAATGCTTGTTAGAGGTCAACAAATGTTGGTGACTTGTTCTGGTCTTGGGTCAAGCCAAGAGACTTGGGATTTGTTGGCAGGGAGATGGGTGGAGCAATGCATGTTTCCAGTATGAAGTGGGATTGGGGGCGGGGGTCCTCCTTCATTTTGGAGGGAGAAATACCGAAAGACAGCATGTGATGGGACTCTGGAGCCTTGCTGCCTTTCTTCAACCACTGGCCCTGCCACTAGTTAACAATGTGACTTTAGAAGTTTGTTTGTTTGTTTTTGAGAAACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGAGCTCACTGCAACCTCTGTGTCCTGGGTTCAAGCAATTATCCTGCCTCAGCTTCCCCACTAGCTGGAACTACAGGTGTGCACCACCACACCCGGCTAATTTTTTTATTTTTAGTAGAGACGGGGTTTCACTATATATTGGCCAGGCTAGTCTCGAACTCCTGACTATAGTTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGCATTACAGGCATGAGCCACCATGCCTGGCCTGACTTTGGAAGTTTAATTTATCTCTCTGGCCCTCAGTCTCTTCCTTTGTATTTCAGAGTCAATGCTTGTAACCATCTTCTAGGGTTACTGGGAGGATTCGTTGAGCTCACACACATCAGAGTTACAAGAGTGCTGGGCTGGTAGAAAGCACACATCCAGTGTTATATGCGCACGTTACTCTTTATTAACAAACCAGAATTTCATCACAAGGCAGCGTTGTTGCAGCAGAACGGCCCACAGTCTGGCATCAGAAAGACCTGGAATCAGTTACCTGCTTTCCTCTTTATTGGCCACATGACCTTGGAGGAATGCCTTCCCCATGCTGCTCCTCAGTTTCCCCACTTATAAGATGGGCCCAGTCATGGTACAGGACTGTGCTGCCTCCAGGCAATAACAAATATCAAACTGGTCAAACAATAAATGTGAACCGTTAATACACTTGCTGTGGGACTCCTGTCCCTTGGTGGTGGTGGTGGAGGGGTGGGTCCCTCCCCATCATGCTTCTCTCTGCATAAAACCCTCCTATGACATCCCCTCTTAAAAAGATACCAGTTTAGGCTTGAGTTGTATGAAAGAGGGAATGTTTCTGGTTTCCTAGTGGAGATTATCATAAGCCTGATCAATTCTGTCCACCACTGATGTATCCCCTTCAGCATCTCCACACCCTGCCCTCAGTGCCCTCCTCATAACATCACTGTCCCCAGAATTGCTTCTCCCAGGAATTCCTGGGATCATTTAGCTCCATTTCTGCTACATGTCCCCCTCCGTTCCTCTGGGAGTTTGATCAGCTTAGTCTCATCGCTTTGTTCATTCCACAAATACCAAGATAGACATTCACAGCTGTGCATTTCCCTCTGAGCATTGCTTTGGCTGCACCTCCTCAGCTTTGGTATGTTGTGTTTTCATTTTCATTAATTGCTAAGCAGTTTTTTTGCTTTTTGTTTGTTTGTGTTTTTGAGATGGAGTCGCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCACCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCCACCACCAAGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCGCCATGTAGGCCAGACTGGTGTCGAACTCCTAACCTCAGGTGATCCTCCTGCCTTGGCCTCCCAAAGTGCCGGGATTACAGGTGTGGGCCACCGCACCTGGCCAGCATTTTCTAATGTATGATTTCTTTGTGGACCCATTGGTAATTTAGGAAGGTGGTGTTTCCTTTTCACATACCAGCAGATATTTGTCAAGCACCCACACTGGGCCAGTGCTACGCTAAGTGCTGGGGTCACAGGGGCGAGCAAGACAGGCCAAGTCCTTGCTTTCCTAGAGAGGGGCCAAACAGTAAACACACAGAAAAGGAATGACATGAGTTGGTGGCAATAACTATAATGAAACACCTGCGGCTGGATGAGGGACTGGAGAGTGATGGGGTGGGGAGTGCTGAGTAGAGACCCAAGGAGGCTCCAGAGGGAGTCTTGTTGAAATCTGGCGAAGAACACTGTAGGCAGAAGAGAAAGTAACCACCACCCTCTCCCACCAGGCCCCTTGTATAGACACCCCTCATAACCCAGAAGACATCCCTAAATAAAGCTCTTATCCTGATAGTTCTCCCCTCACCTTTGTTCACTCGGGGAACAGCCCAGTGAAACACTGCTGTGGGGGCAAGGGTGGGAATGGGGTTCAAGCCCATTGATCCAGACTCCTACTCCGTGACCATGGCAACTCACTTTGCCTCTCCATGCCTTAGTTTTCTAATTTATCCAACGGCGGGAACAGCTGCCCCTATTTAGAGTTGTGGGGAGTCAGTGAATTAATATGTGTAACGTGCTTAGAACCGTGGCGGGCCTCTAGGAGATGTCCAGTCAGTGACAGCTACGATTAACCTGTGCTCTAGTGGAGACAAGCTAGTCAGGGGCTTCTTTCCCCAAACACTCTTGCCCTCCCTCCCCATAGCGCCCTAAATCACCCCCTATTCCCTGCATCCTTATGGCCTGTGTTTGCCTCCCTGGCCAGTCAGCCCCCTCCAGAGCTGTCTCCCCAACTTAGGTTCCACCTACAGCCTTCCAATTACCACCCCAGCCAAGCCTGTCCTCTTTCCGGAGATCAGATTAAACGGAGGGGGTGTGAAGGGCATGGGATGTTGAGTCTTGTCCAAGGACAAGGACACCCGGAGCTGGAGACTAAAAATATCTCACTCCAGGATGGCGTTTGGGGTGGGGGTGGAAGAGACACTCACCCCTCACCTGTGGGAGGAGAGAGCAGCCCGATGGATAGAGGATAAAGGGTCCAGGCCTTGGTAGGAACCCCCTTGACCCCCATAGCGGGCTGGGCTTAGAGCCTGGCCCCCATCGGGTAGGGATGATGGACAGGAAGCGGGTCAGACCTCATGGGCCCTTCACCGACTCACCCTCCGCCCACTTGGTGGAGGTGCTTCCCCAGGCCAGCAAGTAGACCAAGAACTCGGAGATCAGTTACGGGTGCTGAGGGTCTGGTGTGGTGTGGGGTACACACATGGATACCTGCCATCTGGAATGAAAAGTCGTGTAAAGGAGGTGCCAGAGAATGATGCCGGGGGTGGAGGGTCAGGAGAAGCCCCACTAAGGGCAAGGACATGGGGGGGTCAGGAGAAGCCCCACTAAGGGCAAGGATGGAACTCAAGCTCCCTGCTTCTGTTGCTAGGCTTAGCCCAGGTGTGTGATGTCATGGATGGTACAAATAGCTCAGGGGGTTGAATGCATTCTGCTGATGCATGTGTTTCATTATGTTCTGTTCCAACCCTGTTGAATCTCCCTGCGGTATAGGGGTTCCCCCATTTTAAACATGGAGAAAGTGTGGATCCCAGTGGAGATGGGATTTGAACCCAGGTCTGTCCAAGCCCAGGGTCTGTGTTTTGATTGTATCAGACCACCTTCTGACTATATGCCAGCCCCCTTGCTGGAATTTGTTTCTCCCAGGCAAGCAAATTCTCCTTTCTACTGTCTATTAATATTAAAAGAGTGCACTCCCCATACTGACTTTTTTCAGTTCTCTAGGCTTGTCCTGACTTCCCCATTTCTACTACTAGTAGTAACAGTGATAACAGTATCGTATCTTCAATTTTTTAATTTTAGTTTTTAGAGCCAAGGTCTTGCTCTGTCACCCAGGCTGGAGTACAGTGATGTGATCACAGCTCATTGTAGCCTTCACCTCCCGGGCTCAAGCAGCTCTCCTGCCTCAGCCTCCCAAAGTGCTGGGATGACAGCTGTCAGCCACTGTGCCCAGTCCATACCTTCTATGTACGGAGTGCTTACAGAGTGCCAGGAACCGCCCCCTAAGAGCCTTGCACATATGTGTGTGTTGAATCCTCACAGTCCTGTGAGGTAGGCATGTGCTTTGTGGTCCCCAGGTGTAGATGAGGAAATGGAGGCACAGAGAGGTTCAGTCACTTGCCCGTGGCCACACAGCTAGAAGTGGCAGGGCTTACATTTGATTCTGGCCCCAGAGTCCTCCCTCCTAATTACGCTGATAGAAACTGTGATTCCCCTTATCATTATGCTCATTTTAGGATAAAACCTGAAGGGATGAGGACGGAGGGCTGTGGGTGGGGTAGGGTGCAGGAGTATGGAGAGACAGCAGAGGGTCTGAGAGGGTTTGGAAAGAAAACTGAGTCCAGAGGCCCCCAGGATGCTTGGACAATTGGAGTCTGAAAAGGAGAGAAAGTAGAGACGGCCCAGGCCAGCGCGCTGGCTCACATCTGTAATCACCCAGCACTTTGGGAGGTGGAGGCTGGAGGATGGCGTGAGTCCAGGAGTTTCAGACCAGCCTGGGCAACAAAGCAAAACCCCGTTTCTACAAATAATAGAGGGCCTGCAGGTGGTGTGGAGGAGAGGGTCCCCTCTACAAAGCTGTGTCAGGACCCCAGAAAAGATGGGGAGAGATGGAAGGAATTAGAGAAGGAAAAGAGGTGGGGAGTGGGTGGGAGTTGAGAACACAGAGAGGGAAGGTGAAGGTGAGTAGGAGAGTCCTGGGGCCAGGGAGCCAAGAGGAAGGGCTGCCCTTTGGGGTGGACAGGCAGAGGGACTGGAAGCCTAAATCTGGAAGGCTAGGGGGTGATCCGCACAAGGATGGATGAGTGGGCGCACAGCTCCATTCACCTGCGGGGAGACCCAGCGCCGCGGCCGTGTCCTCAGCCCCGTCCTCCTCTTCACAG
Seq C2 exon
GGTCTCCCGTCTCCCACCCGCCGGAGATGGAGGCGAACCCAGCGGGCAGCGGCGCCGGGGGTGGCGGGAGCAGCGGCATCGGGGGCGAGGACGGGGTGCACTTCCAGAGCTACCCCTTCGACTTCCTGGAATTCCTCAACCACCAGCGCTTCGAGCCCATGGAACTGTATGGGGAACACGCCAAGGCGGTGGCGGCCCTGCCCTGCGCCCCCGGCCCCCCGCCGCAGCCCCCGCCGCAGCCCCCTCCCCCGCAGTATGACTACCCGCCCCAGTCCACCTTCAAGCCCAAGGCGGAGGTGCCCTCCTCGTCCTCGTCCTCGTCCTCCTCCTCCTCCTCTTCGTCCTCCTCGTCGTCATCTTCGTCCTCTTCCTCTTCCCAAGCCAAGAAGCCCGATCCGCCCCTGCCGCCCGCCTTCGGGGCGCCCCCTCCTCCCCTCTTTGACGCTGCTTTCCCCACTCCGCAGTGGGGCATCGTGGACCTCTCGGGGCACCAGCACTTGTTTGGGAACCTGAAGCGAGGAGGGCCCGCGTCCGGGCCGGGGGTGACGCCTGGGCTGGGCGCTCCCGCGGGGGCCCCAGGGCCGCTTCCTGCCCCCTCGCAGACCCCGCCAGGACCCCCCGCGGCGGCGGCCTGCGACCCCACCAAGGACGACAAGGGCTACTTCCGGAGACTGAAGTACCTGATGGAGCGGCGCTTCCCCTGCGGCGTGTGCCAGAAGTCCTTCAAGCAGTCCTCGCACCTGGTCCAGCACATGCTGGTGCACTCGGGGGAGAGGCCCTACGAATGCGGCGTCTGCGGCCGCACCTACAACCACGTGTCCAGCCTCATCCGCCACCGCCGCTGCCACAAGGACGTGCCACCGGCCGCGGGGGGCCCGCCCCAGCCCGGCCCCCACCTCCCGCCGCTGGGCCTCCCAGCACCCGCTGCCAGCGCCGCCACCGCCGCCGCCCCCTCCACGGTGTCCTCGGGCCCTCCAGCCACGCCCGTGGCGCCTGCCCCCTCCGCAGACGGGAGCGCCGCCCCTGCTGGTGTTGGGGTGCCCCCTCCTGCCACCGGGGGTGGCGATGGCCCGTTCGCCTGCCCACTCTGCTGGAAGGTTTTCAAGAAGCCCAGTCACCTCCACCAGCACCAGATCATCCACACGGGCGAGAAGCCCTTCTCCTGCTCCGTGTGCAGCAAAAGCTTCAACCGCAGGGAGAGTCTGAAGCGCCACGTGAAGACGCACTCGGCCGACCTCCTGCGCCTGCCCTGCGGCATCTGCGGGAAGGCCTTCCGCGACGCCTCCTACCTCCTCAAGCACCAGGCGGCCCACGCGGGGGCGGGCGCCGGGGGGCCTCGGCCCGTGTACCCCTGCGACCTGTGCGGCAAGTCCTACTCGGCTCCGCAGAGCCTGCTCCGCCACAAGGCCGCCCACGCCCCGCCCGCTGCCGCTGCGGAGGCGCCCAAGGACGGGGCGGCCTCGGCCCCGCAGCCCCCGCCCACCTTCCCCCCGGGCCCGTACCTCCTGCCCCCCGACCCTCCCACCACAGACAGCGAGAAGGCGGCGGCGGCCGCGGCGGCGGTGGTGTACGGCGCTGTGCCCGTCCCGCTCCTGGGCGCCCACCCGCTGCTGCTCGGCGGCGCGGGGACCAGCGGGGCGGGAGGCTCGGGCGCCAGCGTCCCAGGAAAGACGTTCTGCTGCGGCATCTGCGGGCGCGGCTTCGGGCGCCGCGAGACCCTGAAGCGCCATGAGCGCATCCACACGGGCGAGAAGCCCCACCAGTGCCCCGTGTGTGGGAAGCGCTTCCGCGAATCCTTCCACTTGAGCAAGCATCACGTGGTGCACACGCGCGAGCGGCCCTACAAGTGCGAGCTCTGCGGCAAGGTCTTCGGCTACCCGCAGAGCCTCACCCGCCACCGCCAGGTGCACCGGCTCCAGCTGCCCTGCGCCCTGGCCGGGGCAGCCGGCCTCCCCTCCACCCAAGGCACACCGGGGGCCTGTGGGCCCGGGGCCTCGGGCACGTCTGCAGGGCCCACCGATGGGCTGAGCTACGCCTGCTCGGACTGCGGCGAGCACTTCCCGGATCTCTTTCACGTCATGAGTCACAAGGAGGTCCACATGGCAGAGAAGCCATACGGCTGCGACGCCTGCGGCAAGACCTTCGGCTTCATCGAGAACCTCATGTGGCACAAGCTGGTCCACCAGGCCGCCCCCGAGCGCCTGCTCCCGCCCGCACCCGGCGGCCTGCAGCCCCCGGACGGCTCCAGCGGCACGGATGCGGCCAGCGTGCTGGACAACGGGCTGGCGGGGGAGGTGGGGGCGGCCGTGGCGGCACTGGCAGGGGTGTCTGGGGGTGAGGACGCAGGCGGGGCGGCGGTGGCAGGTGCTGGCGGGGGTGCCAGTTCCGGCCCCGAGCGCTTCAGCTGTGCCACGTGCGGCCAGAGTTTCAAGCACTTCCTGGGCCTCGTGACTCACAAGTACGTGCACCTGGTGCGACGGACCCTGGGCTGCGGCCTCTGCGGCCAGAGCTTCGCGGGCGCCTACGACTTGCTCCTACACCGCCGCAGCCATCGGCAGAAGCGGGGTTTCCGCTGCCCGGTGTGCGGGAAGCGCTTCTGGGAGGCGGCCCTGCTGATGCGCCACCAGCGCTGCCACACGGAACAGCGGCCGTACCGATGTGGCGTGTGCGGCCGAGGCTTCCTGCGCTCCTGGTACCTGCGGCAGCACCGCGTGGTGCACACTGGCGAGCGGGCCTTCAAGTGCGGCGTGTGCGCCAAGCGCTTCGCGCAGTCGTCCAGCCTGGCAGAGCACCGGCGGCTGCACGCTGTGGCCCGGCCCCAGCGCTGCAGCGCCTGTGGCAAGACCTTCCGCTACCGCTCCAACCTGCTGGAGCACCAGCGGCTGCACCTGGGCGAGCGCGCCTACCGCTGTGAGCACTGCGGCAAGGGCTTCTTCTACCTGAGCTCCGTGCTGCGCCACCAGCGCGCCCATGAGCCGCCGCGGCCCGAGCTCCGCTGCCCCGCCTGCCTCAAGGCCTTCAAGGATCCCGGCTACTTCCGTAAGCACCTGGCTGCCCACCAGGGCGGCCGGCCCTTCCGCTGCTCCTCCTGCGGCGAGGGCTTCGCCAACACCTACGGCCTCAAGAAACACCGCCTGGCGCACAAGGCCGAGAACCTCGGGGGGCCTGGAGCAGGGGCGGGCACCTTGGCCGGGAAGGATGCCTGACCGAGGGGTTCCCATCCCACTCCCATCAAAAGCCCCCTTCTGGACTCCCACCTCCCAGGACTGATCAGACTCTTCCCCCCTCCTCGCTGTTGCCCCATCCTTCAGAACTTCACACGGACTGGCGACCTTCAGGGCGCACGCCCGACAGGCTCAAGACTGAATCACTCCCATCCTCGACCTCTCTGCCCTCCCCTCATCCCATCAGACACTGAACCCTATCCTCCGTCCAACCCTCGTTTGTGACCCGCATCAGCCCCCGCCCCAGCAGCACTCTGCCCCCAGTAAGTTTTGGCGGAGATGGGTCTGAACCGCCCCTCCCCCTCCTTTGGAATCTGGCTGGACAGTGGAGTATGAGCAGAGTTGGGAGGGCACAAGGGAGTGCTGGGTGCTTTTTGGGGTGGGGGGGTGGGGGGCGGGGTGGCAGACGCGGCTTGTACAGAGCGGAGAATAATAAATCTTACCATGAGGGCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000261221:ENST00000568956:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF0009621=zf-C2H2=WD(100=2.2),PF0009621=zf-C2H2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF139121=zf-C2H2_6=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains