MmuEX0039252 @ mm10
Exon Skipping
Gene
NA
Description
NA
Coordinates
:-:
Coord C1 exon
Coord A exon
Coord C2 exon
Length
bp
Sequences
Splice sites
3' ss Seq
TGCTGATTATTTTTAAACAGGTA
3' ss Score
8.19
5' ss Seq
ACTGTAAGA
5' ss Score
4.8
Exon sequences
Seq C1 exon
Seq A exon
Seq C2 exon
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000075376-'17-26,'17-24,21-26
Average complexity
Mappability confidence:
92%=86=100%
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Human
(hg38)
No conservation detected
Human
(hg19)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development