MmuEX1008674 @ mm10
Exon Skipping
Gene
ENSMUSG00000047369 | Dnah14
Description
dynein, axonemal, heavy chain 14 [Source:MGI Symbol;Acc:MGI:2444525]
Coordinates
chr1:181653532-181664962:+
Coord C1 exon
chr1:181653532-181653677
Coord A exon
chr1:181656995-181657063
Coord C2 exon
chr1:181664776-181664962
Length
69 bp
Sequences
Splice sites
3' ss Seq
GACGCTTTACTGCTCTTTAGGTT
3' ss Score
8.03
5' ss Seq
TGGGTAAGT
5' ss Score
10.24
Exon sequences
Seq C1 exon
ATCATTGGGAAATTATTTTTTGGATTGGTGCAGTCTGGAGCTTGGTGCTGTTTTGATGAATTCAACCGAATCAGTATAGAAGTCCTCTCAGTCATTGCCTCGCAGATCCTGGCAATCAAGATTGCCAAAAGCAGCTATTCTGTCAG
Seq A exon
GTTCGTACTGGATGGTAGAGAAATACGGATCAATATGTCGTGTGCAGTGCTTATCACCATCAATCCTGG
Seq C2 exon
AACTACAGGTCGGGTTGAAATCCCAGATAACTTAAAATATCTGTTCCGCTTAGTGTCGATAATGGTGCCCCACTATAAAATGATCACTGAAGTAATTCTGTTTTCATATGGCTTCAAATCTTCACGATCACTGTCTGGAAAGATAGTTCACCTTTATGATTTAGCTGACAAGCAGCTCTCAAAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000047369_MULTIEX4-1/5=C1-2
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (No Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF127742=AAA_6=FE(21.1=100)
A:
PF127742=AAA_6=FE(10.1=100)
C2:
PF127742=AAA_6=FE(27.3=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ATTGGTGCAGTCTGGAGCTTG
R:
TCGACACTAAGCGGAACAGAT
Band lengths:
182-251
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types