MmuEX1028726 @ mm10
Exon Skipping
Gene
ENSMUSG00000072774 | Zfp951
Description
zinc finger protein 951 [Source:MGI Symbol;Acc:MGI:2441896]
Coordinates
chr5:104802271-104805559:-
Coord C1 exon
chr5:104805281-104805559
Coord A exon
chr5:104804303-104804442
Coord C2 exon
chr5:104802271-104803469
Length
140 bp
Sequences
Splice sites
3' ss Seq
TTTTGTGTTTTGAATTGCAGATA
3' ss Score
10.43
5' ss Seq
CAGGTTTGT
5' ss Score
7.44
Exon sequences
Seq C1 exon
ACGCCAGAACCTCAGCATCCAGCAGTGATTTGGCCCTGATCTAGGGCACAGTGCAGACTACCTGACCTTCTGGATCTTGCCCAGCTCTCACAAGCTTGCAGACCCCACAGCACCCGGACCACTTAGTGCACAAGAACACAGACTCCCCACCCCAGGGCGTGCAGCCTCCAAGCCTCTCTTCCTGCTCTGCCCAGATCACAGGCAGGTCTTCCTTCACTGGCAGCCTCCTGGAAGAAGCAAGAGACTCTGGCAGAGGCTTCAGGCTTGCTGGGCAGCAGG
Seq A exon
ATAAGAAAACTTGTGTGGAGAGAGATCTTATTTCTCATGTCTTCCTTCTCCTGGTGTAGTTTGGCTTCTTTCAAATACAACTTTTCTACCACTTTGTGGTCAGGAGTGGGTAAAGTGAAAGAAGAGGAGACCCTCCACAG
Seq C2 exon
ATGTGCTGGTGAAGAATTCTTGGAGATCCAGGGCTTCTGTGTCTCATCGTAGGGCTTCTGGGAGAATCACCTGGCTTTATCTTGAATACTGATTATCCTCTTAAAAATTACTGATGTACAATTGCTACCTCTTAAGAAAAGGATTCAGTGTTAAATTGCCATTTCTGTGTACCATATTTAAATTTTCTTAAATTTAATTTTATTTTTAATTCATTTTTTATACTCCATATTCCATTTCCTGTGCCCCCCCATCCACCCCACAGCTCCACATCCTACCCCTCCTCCCACCCCAGCTGACCTCTAAACTCCCTGGGGCTTCCTGTCTCTTGAGGGTTAGGTGCATCATCTCTGAATGAACACTCATATTAATTTCTAATTTGTTTGCATTATCCTGACATTAAAAAAATACTATATTCTTTTTTCTATTTCTTTTCATTTGTATATTTTATACTGAAAATACAGAAAATAAACCTGCTGCTGAGAACATCCTATCATGGAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000072774_MULTIEX1-10/10=9-C2
Average complexity
S
Mappability confidence:
92%=92=100%
Protein Impact
NA
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTCTCACAAGCTTGCAGACCC
R:
CCCAGAAGCCCTACGATGAGA
Band lengths:
257-397
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types