MmuEX6022548 @ mm9

Exon Skipping

Gene

ENSMUSG00000007812 | Zfp655

Description

zinc finger protein 655 [Source:MGI Symbol;Acc:MGI:1919861]

Coordinates

chr5:145994310-146008171:+

Coord C1 exon

chr5:145994310-145994471

Coord A exon

chr5:146003789-146003893

Coord C2 exon

chr5:146004444-146008171

Length

105 bp

Sequences

Splice sites

3' ss Seq

ATTTCCTTCTCTGTGAGCAGGAT

3' ss Score

8.21

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

TGATGGTCATTGTCCCCTGAACAGGGATGGAGGAGGTAACATCCCAAGAAGCCGCAGAGTCACCCAGGGGCCACTTCCAGCCTTTGGAGAACCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCAGGACACGGACATGGAGCAGGGATTCAGTGGGG

Seq A exon

GATTTCCAATTTCGAAGCCTGATGGAATCTCTGAGCGGGAGCAAGATCTACAAGTCTTTGATCTGGAGTCTAAGAATAGAGAAGTCATAAGAGGTGACTGTTCAG

Seq C2 exon

ATGGAGAGACCAGAGAAGAAAACAAGCTGTTGATTCCTAAGCGGAAAATTTCAGAAGAAGTACATTCATACAAAGTGAGAGTAGGAAAATTCAAACAAGATATTGCTCAAGTTCCTGAAACCAGAGAGGTTTATAAGTCTGAGGACAGATTAGAAAGACTCCAGGAGATTCTAAGAAAATTTCTCTTTCTGGAGAGAGAGTTTAGACAAATAACAATCAGCAAGAAGACTTTCAGCAGTGAGAAGAACACTGAACCTGAAAAAAGCTTCAGTCTAGACTCCACACTTGATACAGATCAGAGAGTTCTTAGAATACAGACCACTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCAGTTGGTGAACAAGAACCAATAAATCTAACAGAGAATTTTCAGAGTACTGACTATAAGGAAAGCTTAATGGATCTGTCCCACCTTAATAAGTGGGAGAGCATGCCTACCACCGACAGATCCTATAAATGTGATACT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000007812-'2-7,'2-6,8-7=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.743 A=0.556 C2=0.156

Domain overlap (PFAM):

C1:

NO

A:

NO

C2:

PF116123=T2SJ=WD(100=19.7),PF0062824=PHD=WD(100=9.5),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF0009621=zf-C2H2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.6)

Main Inclusion Isoform:

ENSMUSP00000128969