MmuINT0032267 @ mm10
Intron Retention
Gene
ENSMUSG00000060703 | Cd302
Description
CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
Coordinates
chr2:60257883-60272212:-
Coord C1 exon
chr2:60272102-60272212
Coord A exon
chr2:60258000-60272101
Coord C2 exon
chr2:60257883-60257999
Length
14102 bp
Sequences
Splice sites
5' ss Seq
ACGGTAAGG
5' ss Score
10.38
3' ss Seq
TTGCTTTTCTATTATTTCAGGGG
3' ss Score
9.29
Exon sequences
Seq C1 exon
ACTGTCCTTCATCTACCTGGGTCCAGTTCCAAGGCAGCTGTTATGCTTTTCTTCAAGTAACCATCAATGTGGAAAACATAGAGGATGTCAGAAAACAGTGCACTGACCACG
Seq A exon
GTAAGGAGCTTTAGAAATAGTAGTGTTCCTAAAGTCTTTTAACTGTGTCCCAAGAATTGATGTGCAGGCGGTGGAAATGGACCTATACTTTCTCTCTGGTTGGAAGACGGTCATTGAACAGCACTCCCCAAGTTGGAGTGGCAGAACCATACAACACATCAGAGTACCTAGTGACTGTGTGTGCTATGACAGTGTGGCCTGAGAGACACTGACTGAAAGGCCAATAACCTAGAGCGATGGCTCTCGACCTCCCCAGTGCTGCAGCCCTTTAATACAGCTTCCCATGTTGTGTTGACCCCAACCATAAAATTATCTTTATTACTACTTCACAACTGTAATTTTGCTACTGTTCTGAATGATAACGTGAGTAAATATCTATGTTTTCCAATGGTCTCAGGCAACCTGGGTGAGAGGGTCAGTTGATGCCAGAAGGGGTCTCAACCCACAGGCTGAGAACCACTAACCCAGAGTGAGCCTGGCCTCATCTGTCCCCTTCCCTCCAACAGAGGACAGTCCTCAGCATTTCTTGCACAGAATGTCAAGCAAGGAAGGGGAAGGAATGAGGAACTTTTTCCTAAAGAATCTTTTACCCAGGTTTTACACATTGCTTTTTTAAAGTCTACTAACCCAGAGTAACACATACACCCTTAAACAGTTGTTATTAACCTACCTCCATGTGATGCTCGAAACATCTACTGTGGGTGATGAACTGCTTTCAACTGTAGCTTTTTTCATCAATGATATTAGAACTAATTGTGCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTGACACGGAAGGGAAACATAGGGAGGAATGTTTAGTTTAAAATCAGAGCTATCCATTCAACTTAGCTCGTAAAACCTTGAGGACATGGAGAGTCCAAGGCATAACAAGATTGATTCCACTTTCTTAAAATATTTATTTTATGTGGGGTTTTTTTGTTTGTTTGTTTGATTGATTTGGGTTTGGTTGGTTGGTTTTGGGGACAGAGTTTCTCTGTGTAACCCTGACTGTCCTACAATTCACTCTGTAGACCAGGCTGCCCTCGGCCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCAGTGCTGGGATTAAAGGCGCGCTCCACCACTGCCCGGCTCTCTTTTTGCCTGCATGTGTGCATGTGCACCACAGGTGTGCCTGATGTGTGCTGCGGTCATAATCTCGGATGTTGGGTCTCCAGGAACTGGAGTTACCTATGGTTGTGAGCTGCTGTGTAGGTGCTGGGAATCAAGCCCCAGGGCTTGTCCAGATCGGCAAGTGCTCTAACTCTTGAGCCTTCTCCGCTGTGTTCGTAAATGAAGGTTACATTGAAACAGGCTGAGTACTCGGTACGTAAACGGCCTGAGTACGTGAATCCAAATGACCCCAAAGCATATCATTAACTTGGTTACGAGGCGAGGTCAAAGTTCAGTCAGTGAGAGTGGACTACATGCATTTCCTGGAAAATTCATTCCCATTGTGTGCCAAGTGCTTCAACACTTCATAGTTTGCATGACTTCACCTATCATAACAAACTTATTGATGTCATAATTGTAACAGACCTATTGATCTCTTCCTTTTGTCTCCTTTATCAAAATCAAATTCAGGTGTTTGTTCCAGATCACACAGATTAATAATAACCAACAGAAGCCAAGATTCGGACCCAGGGCTGGGCTTACATTTGTGCTTGTGTGCTGGCTTGTCCTTGAACTGTCTCTGGCTCCCTCCCTCTCTCTCCCCCTCCTACAGGACAGCCCCCTTACAGTCTTTAAAGATAACTGCATGAAAGCTCCCAGAGCACCCACTTACACCTTACAGTCTATTTACCCTCCCCTTTGTTCTAGGCTGGCCTTAGTGTCTTGCTTCCTCAATTCCATGTAACAGCCGCAGGACATCTGAGGTCCTGGCCTTAAGAAGTCTAGTAAATTTTCTGGAAGCCAAGGGGGAAAAAATTGATTCAAGGAAGAGGAAGTAATTAGCTGTGTCAAATGCTGCTACCAGCTTGGGATGTGGGGTGGGGTGGGGTCAGGAACTCACCCTTGGGTGCCCTAATGTGGGTGCCATTTATGATTTACACAGAACACTCTATGTAGCTCAGAGCAAATTCTTAACTGAAACACATTTTAAAAGTGGGGGGGCAGGAAGAAAGGTTGGGGAAATGGGTATAGATAACTTATCTCTTGGTGAAAAATCCAAAGGCACCAGGGCAGCAGAGACAGCGGAACAAGTGTGTACGGCAGGAATGGGTTTTAAGGGGGCAGAGATAGCCTCATCAGCTTGTCTTAATCCTCAACTCGGCTCTTAACGGCCCCGTACAATTTACTGACAATACCAACTTACTGTAAAAGAAACAAACAACAAACACCCCCCTCCTTTTATAGGATTCCTAAATGCAAAGTCAATGCTTATTACATGTCTTGGCAAATTGTTCTCTTTGGATTCCAGTTTCATAACATGTAATGAAAGAACTCAGTGGGGAAACCTCCACTCAGCTCCCGATTCGGCGTGCACCCAAGAATCACGAATAGAACACAACACCTTGATGTAACAACAAGAGGTTTTTTAATGGCGGAGCTCCGGGTCGAAACGTATCTCACATAACAGGAGACAGTGGATTCGACCACGAGGCTTGGAAGCTAGGGGTTTTTATAGAAAAGGAGTGGGGCTGGGGGAGGAATTGGCGAGGTTTCACATGATTGGTCCATTTAAACATCAGCAGCCTGTAACATTTAACTTAGGTCAGAGGGGTGGGAGCTAGGGAGGCGATGGGCTTGCCCGGGCATGTCCTGGTCTGTTCTGCTATGTTCTCAGCCCCAGGTTTCAAAGCTCAGAAACAACTCTTTGGGCTATTTAACATACATTACATGAATTACAGTTTTATTTCCTTTCAGTAACAAGTTTAAATGATTTTATAGAATAACAAACAGACAAAAAGCCCCACAACCCCCCCATCCCCACCCCCACCCCCAAGGCAGCTCTGTTGTTCATGTCAGTGATGTGGCTGAATACTGAGGGCAGCCTGCAGTGGGTCCTTGCCTTCCATCTTGCTTGACAGGGTCTCTTGTTATTCACTGCTTCAGATGCCTGGGCCGGCTGGCTGTGGGCTTCTGGAGGCTTCTGTCTCTACCTCCTGTCTAGCCCCAGGGACACCGTGAGTTCGTACATGGGCTGTGGCATCAATGTCAGTGAGTTCTGGTCATCTGAATTCAGTCCTGATGTTTGTGAGGCAAACATTTTACCCACTCGAGCATCTCAGCTCTACAGTTCAAATTTAACAAGTAATATTTGACACAGGCTCTCTCTCGCTGATTAAGTAGGCAGGTAAGTGCCTTTCAGTAGCTGGGACCACAGACATATCTCACACTTTCAGCAAAATGTCTTTTTTTTTTAAAGACTGATTTTCATTATGCACATTGTCCAGCCTGGCCTTAAACTCCTGCCTCAGTCTCCTGAGTAGATTACAAGCATTTGTCAGAGGACCCCAACAAAATTTCTGTCTCCTTGAGTGTGCCCTTGCCCCAGCCTGCCCCTGCTGCCCTGGGTGTCCTGGAATTCTCTCTGTAGGCCCAAGTCCCCACACATGTGTGTGCTCCACCAGTGAACTGCTTACCCGTCCTGTTAAAGGTGTGCTTGGAGTAGAGACAGCTCATGTATCTGGCTCTGTCCCAAAGACAAGCTTCTGTTACCCTCTTGTTGTCTTGACATTCCTTTAGTTAAATCTAAAACCACCAGACCTCAGGGTGAAATATGAGCTGGTGGGACTGGCCTTGAGTTCCTTAAAGGGGCTTTTTCTTCTGTGGTGGAACTAAGAATCCACCTGATTACCTCATCACACTTTTTTGAAACTCCCAACTCCATTACTTAGAGAGGCCTCCCTGCCTTTAATCCCTGCACTTGGTGGCAAAGGCAGGCAGATCCAGGCTACCAAGGTTACAAAGTGAAAGGGGGTAAAGGGGAGGGGACAAGGAAGTGTCTGGGTGTGGTGACGCCCAGCTATAATCCCAACAATTAGAAAATAGAAGCAGGATGACCAGGGGTTCCAACAGACAGTTGTGAGCTGTCATGGTGAAACCCTGTCTCAAAAAATAAGGGCTACTTCAGTCCCCAATGTCACTGGGGGTGGGGTGGGGTGTGAAAACAGAAACAAATGCCCACCATGACGGCTGATTCCAGTCATCAACCTGACTGGATTGAGGGGTGCCCGGGATAGTTGGTAAATGACTTCTGGGGATGTTTACGAGAGTGTCCACATGGAACGGGTCGGGGGAAGCCTATGGATCCACAAACAGTATGCAAGCGCCTGCCCTGGAGTGAGTAGGTGTTATCTAGTCAGCTGGAGCAAGTAAGTAGACAGGACAGAGGGACACATGTCCTCCCCCTCTCGTTCTTCTTTCAAAAGCAGATGTGGTTGCTGCATCCCTTGGACCTGATTGCAGCCTCTTCAGCCTCTGACTCTGGGCCTCACACTATTGTTAGGAGTATTCTTGTCTTTCAGCCCCAGATGTAGGCCCTGTTCTAAGGCATCTTGTACTTAGCCACTAGTAGCTCCCCTTAGCTCTCCAGTTTGCAAATGGGCGTTATAGAATTTCATATAAGCCAATATAATAAACCCTCTCATAAAAAAATTAAATAAGAAGCACAATTTCTGAAAAATCACAAGTAAAACATTTTGAAAGACTATAACGTTTTCTACCTATATTTAATTAAAATCATATTCATTATAGAAAGGAATAAATGGAAATATAGTTTTATTGAGCTAGCACATAGTTTGGTGTGGTTTTGACAGGCTCTGGTTTTGTACATAGGCTGGTCTGGAGTGCTTGATCCTCCTGCTTCAGACTCTTGAGACCTGAGATTAAAAGTGGGCTGGAGAAATGGCTCAGTGGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCAGCACCCACATGGCAGCTCACAACTGTCTGTAACTCCAGTTCCCGGGGATCCAACACTATCACACAGACATACATGAAGCCAAAACACCAATGCACATAAAATTAAAATAAATCATTAAAAAAAAGTGTGTGTACCAAGACTGCATGGCCACATTGTACATAAATACATTTATTCCCCCTGGAAAAGTTGGTAGCTATTAAATGGTGTTGACATGTTGGCTTTTAGCAGGGGCAAGGAGTAGGGGGGAGACACAGTTTCCATTATACCCAGTTTATTTCTTGGGAATTGAGCAGAACAGCAATGTCGCTAGCCTTAAGAGATTTGTTAAATGAGCTGTTCTCAAAAAACTGTTTGCAGTCTCTACATCTGTTTCAAAACAAGGTCATCACACGGTCTGGAAAGCCCAGGTTGGTCTCCAGCTCCGCTCTAACTCATGACCCTCCTGCCTGCACCTCCCACGTGCTGGAATTTTAGGGGTGCACAGCCATGCCGGGTACCTTCCTCTTTCTCAACAATGTACAGTAGTTACATTAGACATAAGCATAGATCCTAATAACGTAAACTGGATTGGAGGTTGTAAACCGTAAAAAGACATGACCCTACCTTAGCGCATTGTCAAACCTTGTTTACCCTTTTATTAAAAATACAACCTATGTATTTATCAGATGAGCAACTGTTTATCGTACACAAGCAAAAGTGGCTGACTGGCCTCCTGTATGGCTCAAATGTATTTTAGCAAATTAGGTAAAATTGGTTTTAAAACACTGAGATGTTTTGCAGCCTGATTCTGGTTACTTGTTTAGAAGGCTGTGAGCTTCTGGTGGGCTTCTTGTTGAAGCAAGGACCCTACTTGGGAATTGTTAAATTGGTCTTGTGTTTAAATGGTGTCTTTTTCTGAGTTAAGAGTGAACTCCCTTCAAGACTGGGGATATAGCTCAATGGTAGAGGGCTAGCCTCCTACGAGCAAAGTCTCAGGTTTAATCCCCAGCACCTACCCCACCCAAAACATAAAGTCTTACTGATCTGAATTTTTTTACAAGCTCCTCATACATTTTTAATAATCCTACCACTTCTCTAATAATCTCACTGACTTTCACTCTACAAATTCCCATTTAATAGGTGAATTAGAAAGTTAGCAATATTAGTATTTCTTACTTTGGTCTACGTAGTGTTTTGTTTAGACTCCTAGGTCAATATGGTTTCTGTGTTCTCTGCTATGTATGAACAGAGAGCATAAAGAAAACTAGGATATTTAATTTGGGAAAAAAATACAATCACACAAAAGTCCTATCTTAACCCTGTCACTGGGGAGGTTGCAGGGAGCCGTATTTACTGTTCTCTCAAGGTTTTGTGCTAGCTGACCGTATCTTTTTTTTTTTTTTTAAAGTTAGCCTAGTGTGCATGAGACCTTTTTTTTTTTAAATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCGCATACCCTCCCCCCCACTCCCCTACCCACCCACTCCCACTTTTTGGCTCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGACCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAGAGCTCTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTGTGCAATGGTGGCTGACCGTATTTTTACTAGTATTATTCATTTAGTAAAATAACTGACTAGAAACGGTAAGGGCTGATGGGATGGGTCAATGGGAAAATGTACTTGCTTGCCAAGCGGGCCTGACAACCAGAGGTCTGTCCCTGGAACTCATGGTGCTCACAGTGGAAGGAGAGAACTAGTTCCCGAGTTGTCCCCACCTCCACGTGTGCGATCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCACACACACACAAATAAAATTAAAAATAAAAATTTAAAAAAAAATGGAGGTAAACACTTCAATCTAAGCTGAAATCTGCTCCATACACTCATTTTCCATTTACATTTTGTGAGAAAAAAGCTATGGCTAAGAAAAAATATTTTGCCTGAGGATTCAACCATCATTTTAAGAAAAGTGTGTCTTATTGGCCACATACAATCATTTAAGTCTCTATAGAATTTAATTACAGTGCTTAAAATATTAAAGTTCCATTGGCTGCAGAAAGATCAAAGAAAAGGAAGGGGAAAACTCATTTTTGGATACTGAAGAACCCGCCTGCCTCCATTTTAGGCTTAAAAACCATCTTGTAGTAATGAGACACTAGGTCCATTCGTGTTTAAGATTAACCCTCTGTTTCTTAAGGACTAAGTGATGCCCCCACCCCCTGTAACTTACTGTAATGTCAGTTCCAGGAATGGAAATCATGTCTCTGTCTCAAAGAGTTGACTGTAACCATCTTGCCACCCTACCTTTGTTTCCAAATCTTCCGTGACGACCTGTTGAGATGACTACCTGGCTTTGCCCACCTTGCAACCTTATCTTTGTGGCAGGAGCAACTAGCTTGTTAAGATGTCCTGTTCCTGTAATCCCACCTAAGTTGCCCACCAACCCTCCCCCCCCCCATTTGGAAAACCCCTACCTCTGAGCTATTAATTTGCCACAGTCAATGCTGACCTCTCGAACCCCACCTTAAGGGTAGGCAGCCCATGTACACAAATAAAAGCTTGCTTTAGTTAATTTGCTCCCTTTAATTAACTTGGCCATGATGGTTTGGGTTGGTCTATCTCCGCCCATCTGTGGGATTAACAATGCCTCTTGTACTGAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTTGGTTTTTTGTCAACTTGACACAATCTAGAGTCATGAGAGAGGAGGGAGCCTTAGCTGAAAAGATGTCTCCATAAGATCCAGCTATAAGGCACTGTCTTAGTTAGTGATCAGTGTGGGAGGGCTGAGCCCATTGTGGGTGGTGCCGCCTTGGGCTGGTGGACCTGGGTCTATAAGAAAGCAGTCTGAACAAGCCATGACGAACAAGCCAGTAAGCAGCATCCTTCCATGGCCTCAGCCTCAGCTCCTGCCTCTAGGTTCCTGTCCTGACTTCCATGAGGAGCAGTGACATGGAAGTGTAAGCTACATAAGCCCTTTCCTCCCCCAGCTCGCTTTTTGGTCATGTTTCCTTTCAGCAATAGAGACCCTAAGTAAGACACCTCTATATGTTAACTATTCCTCCCGAGGATTTTTCTAGAATAGCAATTTGTTTACACTTTACCAATAGGTGTTAGAGTCGATAGTTAAAAGTACATATGGCATTTACTAGACAGAAAGTGGTATCAGCTGGCCCTGATTAAAAACAAAATAAAACAGAGGGCTGGAGAGATGGCTCAGTGCTTAAGAGCGCTGGCGACTCTTCAGAGGACCTGGGTTAAATTCCCAGCCCCAGCATGGGAGCTCACAACCATCTGTAACTCCAGAGGCTCTGACACCCTCGTTCAAAAATCCATGCAGGCAAAACACTGATGTGCATAAAATAAAAATAAAATTTAAAAAAACATAACTTTTGTAGGCTGCTGCTATAACATTTATTTAAAATATTGCTATGGGTTAATAGAAATAGTAAAGAACCAAAGAATTAAAATGCAAGCTATGTATGTAAAATCCCAATTAGAATCCACAATTACTAGCTAAGAGCCAAAAGAAAGGTGCCATACTCAACGTAATAAAATAAAGTACTACAAAAACAGTTGGCAATTTTCAGTTATCAAAACTGTGGATTTCATATTTTGCATCCCTTTATCAATCAAGAAAAAAAAACTTTTTAAATGTTATATAACATACATATAAAATAAGAAATATATATTATAAACTTGTAACAATAGCTGAAAATATAATACATGTTTTTCAATAGGCAATAGGTGGGATATTGTGGTGTTATGATAAGAATGGCCACCATAGGTTCGTATATATTTGAATGTCTGCCTTCCAGTTAGAAAGTATTAGGTGTGGCCTTGTTGTCACTGGGGATGGACTTTGAGGTTTCAAAAGCCCTTCTCAGTCAGCTTTCTCTGTCTCTTGCTTATGGATCAAGAGGAAAGCTTATAACTACTTCCTCAGCACCGTGCCTGTCTGCTGACACTCCCTGCATTGATGGTCATAGACTCTAACCCTCTGGAACCATGAACTCCAAATTAAACACTGACTTTTCTAAGTTGCCCTGGTCATGGTGTTTTGTCAACAATAGAAAAGTAACAAAGACATTAGTTGGTACTAGAGAGCGGGCTATCCTTGGGACAACCCTGACCATGTGGGTTATTTTGGAAGAATATAGGCTTTGGAACTTTGGACTATGAAAGCAGTTGGATGCTAAGAGGGACTTAAGGGGTCATCCTAGTAGGTCCTGGAAGACAGTCATGCTAAGAGCAATGTGGACTAGGGAGGTAGGCTTCCAGAGATTTCAGAGACGAACAATATTAGCAACTGAGCTAGATGTCTTGTGATATTTTGGCAATGAATGTGGCTTCTTTTACTCTTGTCCTAAGAATATGCCAGAGGCTAAATTGGAAAGTTTTAGGCCAATTTCATGAGCAGAAGAGATTTCAAGGAAATCTAATACTGACTTGGTCACAGGGTTATTAGTAACCACTCTTATGCAAGTCTACAATGAGAGGGAGCAAGCAGGGCAAAAAGAAATATAAAATCAAGATGTAAGCGCTCAACTACTACTCAAGCACCATGCCTGCCTGCCCGCTGCCATACTTCCTCCCACTGATGGCCACAGACTCTAACCCTCTGGAACCATGAGCTCCAACCACCACCAGGAAATTCAATATTGGAGACAAGGATTGTGCTGAAAGAGATAAGGAGAGGCCTGATGCGAACCAGAAGAGAGAGAGCAGTTCTCTCAGGGTGAGAGCGGACTCGGCTAACCCTCAACTTGGAAGGCAAAGGCCTGAGGGATTTTCTTATCCTAAAGAGCAACAGTCAAAGCGTATGTGAATGTAGTTCAAGGAGAGGACCAGGCCCCATCCCAAGAAGGTAGCCAGCTTGGCAGCATTTGCTGAATGGTTCTTCTGTCTTGAGTCAAGAAAGATACACAAGTTTGTAATTTTCCTCCAGTCCACGGCTAAGGAGAGCTGCTGAGGCCAAGTGAGTTGCAGGGGAGTCCCTGCACGGAGGCCCTTAGAGGTCATTGCTCAAAGCTGTGAAAATGAAGCCTGGATTGCATCGGAGACTGGGATATAGAAGGTGCCAGAGCTGTGGGAAGTCTGCCAAGGAGGGCTGCATTCAGGAGTAGAGCCAGCCCAAGAGAAAGGTGTATTGCAATCAGCAAGGCTGGAAGGGCAGAGCCTCTCAGCCCTTTGGAAACAGGCAAGGAACTATAGGATTTGGAGTTTGCCCTGCTTGGTTTTGGTTTTACTTTGGTCCACTATTTCCTTACTATGCCCCATTACTTCCTTTTGGAATGATGTATATTCTGTGCCATTGTATGTTGGAAGTATGTAATTCGCCTTTTGAATTTGCAAAGCATGCAATTAAGAGATTTCCTTGAGCTTCAGAGGAGACTTTGGACTTTGAAACCACGCTGAGACTCTGAAAGACTTTGGACACTTTTGAAGTTGGACTAAGTGTATTTTGCTTTATGATATGACAAGCTTATGGCAAGCAGGGAGTGGTACCTTCTTAGTGGCTTTTTGATTTCTGTGACAAAACACCCTGGACAAGTCAACTTATAGAAGAAAGCATTTCATTTGGGGCTCATGGTTCCAGAGGGTTAGAGTCTAAAAACATTATGGGGGAACATGGAAGCAGGCATAGCACTGGTACAGTAGCTGGGAGCTTACATCTTAATCCACAGGCAACAGGCAGAGAGCTAACGGGGTGGCATGAGCTTTTGAAACCTCAAAGCCTGTCAAGTGACATATCTCTTCTAATAAGGCCACACCTATTAATCCTTCTCAAACAGTTCCACTGGCTGGGGACCAAGAATTCAAATATATGAGGTTGGGTTCTCAGTCTAACCACCATTGCTATGGACATAAAAAGCATGAAATGCTTAAGATATTAAGAAGGCGGACTTAGAAAGCCTTGCTGCATTCTGGCTTTAAAGGTGTGATTCATTTTTAACATCCCTTTCATAATCACATAATAATTGTTATTGAATATTTAGAAAAACATATGAAAATAGTTTGAGAGAGAGAGAAAAGAAGAAAAGGAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGTAGCAGAAGGAGAAGGAGAAGGAGGAGAAGGAGAAGGAGAAAGAGAAGGAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAAAACCTAAATTGGACCACCCTGAGATAATTGTTAATGTTTTGGTAACTGTGGTCCCAATCTTTCAATGCCCTGAATAAGCTGTAGTGATTTTGCCTGAGAAAAGCAATGTGTGCCCTGTGCAACGTGTGATTGATCATAGTGCCTAGTTGGAATGGCAGCCAATGATTAACACAGAATATGCTATGAAGGATTGCTCAGAGAATATGTGCTTTAGGTCTTGTGATATGTATCACCAAATTTTTCCACAAAAAAATCATCCAAATTTACTGATTGCCCATATTATCAATTCCTAGTTTTCTACATCAAATGCTAACTTGGCTAGTCTGCACATCTGTAAGTTTGATTTGCATCTTTCACAGAACTCTTACTTTTGTGTGGATGTATGTCTGTGGAAGCACACACCATGTGCAAGTCTGTGTTCAGAGGACAACCTTTGGGAGTCGGTTCTCCACTTCCGCAGAGCTCTCTTACTTCTGCTGCTGTCCTTCACACGCCAGGCTAGCGGGCCCACAGTGCGCCAAGCAGGTCTCCTGTGTGTGCCTCCCATTTCAATGTAGCATGCAGGGATTACAGATGTTACCACATCTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATGTGCCACCACGGCCAGGCCACATCTGACTTCTGATGAGGGTTGAAGGGACTGAACTCAAGTTGCCAGACTTGCAGGCCTAACCAGCATTAGCTGAGCACCTCCCATGTCCTAAATTTTCTTATTATTTATTTATTTATTTATTTATTTATTACCAGTGAGAATTTTTCTCACATTTCTTGTTATATTTTTTGTGATAAATTGACTTTTTAAACACTATCTCCTATCTCTCTCTCCCCCCTCCCTCCCTCCCTTCCTCTACCCCTTCCCACCCCCCTTTTTTTCAAGACGTGATTTCTCTGTATAGCCCTGGCAGTCCTAGAACTTGCTCTATAGATCAGGCTGGCCTTGAACTCAGAAATCTGCCTACCTCTGCCTCTGCCTCCCAAATGCTGGGATTAAAGGCCTGCCGGGCTTGGTTTTTTGTTTTGCTGTGAAGGGACACCATGAGCATGGGAACTCTTATAAAGGAAAACATGTAATTACAGGTCAGAGGTTTAGTCCACTATCATCATAGTGGTGAGCATGGTAGCACACAGGCAGATATGGTGCTGGAGAGCTAGCTAGCTGAGAGTTCTAACCTAGATCTGTAGGCCACAGGAAGAGAAGAGCCACTGGGCCTCGCTTGGGCTTTTGAAGCTTCAAAGGCCACCTCCAGTGACAGACTTCCTCCAACAAAGCCATAGCCCCTAATCCTTCTCAAATAGTGCCACTCACTGATGACTAAGCATTCAAACACATGAACCTATGGAGGCCATTCTTAATCAAGCCACCACAGGTATGTTTTAAGAAACCATTCCTATATATGTATGAGTGCAGGTCTACATGAGCCACCTGTATGTAGGTCAGAGGACAACTTGCAAGAGTCAGTTCTCTCCTTCCATCATGTGGGTCCTGGCGACAGAACTCAACCAAGCTCGGCACCAGGTGCCTTTAACCTGCTGAATCGTCTCTGCTGGCCTGGGGTGTGCTTTTCTTTTGGACCACAGACTTTTTTCCTTCTGTCGTTAACCACCCAGGTTCCTGCCTATTTAAGAACATGCAAAGGGAAAACACAATTCACAGTTTTTACATAACTTTATGATTCCACTTGGTTCTTGAAGTTGCTTTTCTATTATTTCAG
Seq C2 exon
GGGCAGACATGGTAAGCATACACAATGAAGAGGAAAACGCGTTTATACTGGACACTTTGCAAAAGCGATGGAAGGGTCCAGATGATCTCCTGCTAGGCATGTTCTATGACACTGATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000060703:ENSMUST00000074606:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0005916=Lectin_C=PU(13.6=39.5)
A:
NA
C2:
PF0005916=Lectin_C=FE(35.5=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types