MmuINT0098793 @ mm9
Intron Retention
Gene
ENSMUSG00000040987 | Mill2
Description
MHC I like leukocyte 2 [Source:MGI Symbol;Acc:MGI:2179989]
Coordinates
chr7:19425315-19441552:+
Coord C1 exon
chr7:19425315-19425440
Coord A exon
chr7:19425441-19441288
Coord C2 exon
chr7:19441289-19441552
Length
15848 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
3' ss Seq
CCCATCTCCTCCTCCCTCAGGAA
3' ss Score
10.62
Exon sequences
Seq C1 exon
TTTGCACAAAACTCCATTTGAGAAAAATGAAAGCCAGTTCTGGAAAGCCCAGAGAATTCAGACCAGCAGTCCTACTGTTGATCTTAGGGCTGCTCCTTAGAGACTCACGGGGATCCAGCATCCAAG
Seq A exon
GTGAGCTCTGGGCAGGATGGGGACCATCCCTGTAAGCAGGGGAGGGATGAGTCACACTGTTTAAATGAGTGAAATTAGAGTGTACATAGAGAAATGGCTGTCCCAAGGAACCAAACTAGGGAAGTCACAACGGAGAGGGAGACAGAGGAAAGGGGGAAGAAAAAGAGAGTGTGTGTGTGTGCACAGAGAGAGAAGAGGACCAGAAATGTTTGGATTATAAAGGAAAATAATAATCTTCTGGGGGAGGAGAAGCCCAGACCCTGGGCTGGAAAATTCAGAGTAGAGGTCCGGGTGTGCTAGGTAGGTAGGGACTGAGGGATACCGGGAGAACCTAGGGGCTAGGTCTGCTTTGGTGTGTAAAATAGGCGGCACAGCCCCTGCTCTCTGCTCTGAATCCCAACCGTAAGGAATAGGTCAGAGCGCATAGGCACAGGAAAGAGTACGGGAGGGAGAGGCAAAGGGTGGAGCGGAGGAAACTGAAACTGGAGGAAGGCTTAGCAAGCCCAGCAGCCTTCGTAAAACATTCCCCGAGCTGACATAAGTGGGGCGTGGGGTTACATTGGGGAGCCTTTATTGTCAGCTGGAGGACACATGACTATTGGAGTACGCGGTCTACCACCGGAAGCCCCTGCAAGAAGGAACAGGCAGCCCTTTTCTAGACCTCAGTGGGTGGCCTTCTTAGGAGAAAAGGGATGTCTGCAGGGGAAGACTACAAAAAAAGGCCTGACACAGAGACCGGGGGGGGGGGGGGCGGGGCGGGAGGAGGAGCATTTAGTGTCCCTGCCCTGAAGAAACTCCCAGAAGAAACAGGGAGTTGGTGAGTGTCTGCACACCATGGGCAGAGGTCTGGATGCTGTGTCTGGAGAGGACCTGATTGGTGTCTTTGCTCATTGTCAGGTTACAGTGACTGTGAAGCCCGAGAAAACTGAGGATTAAGAGTGGTAGGGGCCTGTGATGAGACAAGCTGTGGAGGGTGTCTGTCTGTCTGGGAACTATCTGAGCAAGTATCAGGGAGGAGCTGGGGGCGGAGTAGAAGCTCAAAACACTCAACTGAGACTCTTCCCCCTCCAGTCCTTGGTTCCAGGGGTAGCTATAGAAGATTGTTCTTTTAATATCTGGAATAATTATTTTTATTGTTGTTGTCTCTTGCTTGTTGTTTGAGACAGGGTTTCACTGGGTAGCCCTGGCTATCCTGGGACCAGGCTGGCCTTGAATCCATAGAGCTCTGCCTGGCTGGCTAGCTAGAATTAATTTTCTCAATAGGAAATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCAACAGGTATGCAGGATATGCACAGGACAGAACAGCAAGGATCTTCCTCTACTCTCCTGAAACAGGGTTTCTGGCTGACGTGGAGGTTCATGGTTCCAGCAGGCTGACCAGTGAGTTTTCAGGACTGCCTGTCTCTGCTCCTCAAAGCTGTGGGAGGAGGGGTTACGGGAATGCACAGCCATGCTCTTCTTTTTTATGTGGGTGCTGGGGATTCGAACCCAGGACCTGTGTTTGCAGAGCAACATTCTTATTCACTAAGCCACTTCCTATCACCTGGCTACTTGCTTTTGACAGTGTCCCCACCATGTAGCCCAGGATGCCTTGAAACTTGGCCACCTCCTGGCCCAAATGGTGTATACACATGCACTACCACTTGCGGTGGGGGTTATTTTCCAAATCACCAGAAGGACCTGATGACATGTCTATGTCAGTTTTCTTTTCTTTGAGATGTAGACATTCCCCCAACAGAGTGGTGCATGGACTACAAATGACGAACTGTGTGGACTTGTCTTTGTCACTCAGAACCTACAGGACACAGAGTAAAGGCCCTGAACGTATCAGAATCTACAGGACACAGAGTAAAGGCCCTGAACGTATCAGAATCTACAGGACACAGAGTAAAGGCCCTGAACGTATCAGAATCTACAGGATACAGAGTAAAGGCCCTGAGAGTATATTTCAACTAGATAAATATTTGTCTGATCCGATCCAAATCCCATGATGAGTCCTAACCTTCAGCTGCATTACAGTTATCCAGGAGAATTCCCATCTGATAGACTACTTAGCACTGTGGTCATGGGAACTGGACCCACAGACCCACACATGCCAGGGAAGGGCTCGCCCCTTAGCTCCAGCCCCAGCTGCCTGAATTGTATTTCCTTATGTCCAAAGCCTGGTGAAATCCTTCATCCTTTTCCTATATTTTGTATATTTTAATAATATTTTCTTAACATACATGAAACAACACATAGTTTATTTTCCTAATAGCAGAAATTGCCCCGTTATGTGAGATTTTCCTCTGCCTTTGCTATGGTTGAGGCAAATGTCACCCGAAGGCCCATCATTGCAAACTTGAACCCCAGTCTGTGACATTATTGGGAGGGATGAAATGGGTTCAGGAAAATGAAGTGAATCATGAAGCAGAGCTTTGAAGGGGACAGTGAGACCTGTCTTACTTACGGTTTCTATTGCTGTGAGGAGACACCATGACCCCAGCAACTCTTATACAGGAAAGCCTTATTTACTTGGATCTTGTTTACAGAGGCTTACTCCATTGTCATCAAGGCAGGAAGCATGGTGGCATGCAGGCAAACACAGTGCCGCAGGGTCTGAGAGTTCTACATCCATCGGGATCAGCAGGCATAAGGAAGAGAGTGACACTGGGCCTTGCTTGGACATTTGAAACCCTAAAGGCCACCACCAGTGATCCCTTTCCTCAAACAAATTCACACTCACTCCAAAGAAGCCACTCCTCCCAATGCCACTCACTAAGCCTTCAATTATATGAATCAATGAGGGCCGTTCTTATTCAAATCACCACAGCTAAAGGTAGCTTAGTATATAGGGATTTAAGTGGGTGTGTATACCCTTCTTCTTCTTTTTTTTTTTTTTTTTTAATTTGTCATTTGAGCATTTGATGGTGTTGTTTCACAATAGCTTGACCCGGTGGGTTGTAAGGGATCATAACATGATTAGTAATCCATAGATTACTCAGCTATTAAAAACAATGAACTTATGAAATTCTTAGGCAAGTGGATGGATCTGGAGGATATCATCCTGAGTGAGGTAACCCAATCAAAAAAGAAGTCACTTGATATGCACTCATTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATACAATTTGCTAAACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATACTTCGTTCCTTCTTAGAATGGGGAACAAAATACCCATGGAAGGACTTACAGAGACAAAGTTCAGAGCAGAACCTGAAGGAACAGCCATCCAGAGACTGCCCCACTTAGGAATCCATCCCATAAACAACCACCAAACCCAGACACTAGGCAGATGCCAACAAGTGCCTGCTGATAAAAGCCTGATATAGCTATCTCCTGTGAGACTCTGCCAGTGCCTGGAAAATACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCCCCCAATGGTGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGACTGAAGCCCCATAGGAGGAACATCAATATGAACTAACCAGTATCCTCAGAGCTCCTTGGGACTGTACCACCAATCAAAGAAAACACATGGTGGAACTTGTGGCTCTAGCTGCATATGTAGCAGAGGATGGCCTAATCGGTCATCAATGGAAGGAGAGGCCCTTGGTCCTATGAAGGCTCTATGCCCCAGTATAGGGGAATGCCAGGACCAGGAATGGGAGTGAGTGGGTTGGGGAGCAGGGGGAGGGGGGAGAGGATAGGAGATTTTCAGAGGGGAAACTAAGAAAGGGGATAACATTTGAAATGTAAATAAAGAAAAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATCCATAGATTGCAAACTTCTATAAAGCACTTGCTAGTACACACAGGTTCATTACAGACCACAGTTTCATGAATGTCAGAAGGCTCTAAAGGCTCCAGAAAATGCCATTGTGTCATATCTGGAACTGAACTTTTTCAAATAGTTCTTTATGTGTGTCGTTTCTAGGAACCCCCCCCCCATTACAACTAAAACCTGGTAATAATTATTTACAGATCCCAAGTAGCATGCTAATACAACCTACCAATTATTGTCAGTATATAATGTTAATCTCAAACCGAGGACAAAATGGCTGGAGTACCTACTTAATATATCAAAGCAGACCCCACCCCTATCCTGAACTCTGCAGCCCACAAACTGGACTGCCTTTCCCCAGCAGCTCTCCATATATTATCCAGCCATTTTGGCTACCTGGTCTTTTTTTTTTTTTTTTTTTTTTTCTTTTCCCTTTCTGGCCTCTTGTTCTCCTGACTTTCCCCCTCTTCTCTCTCTCCTCCTCCCCTCCCCACATGGCCTGGCTCAGAGTCATGTCCACTCTAGACTCTCCCAGATGTCCCTACTCTGGCTCTGCCCTTCATATCTACAATAAACCTTCTCCTTCACCACGCCTAGGACCAGTCATGCCCTTCCTTTTTATTTCTTTTCATTCACTTGATGCCAAAATCGGGGAATTGTCACAAGTGAGTTCCCCTCAAAGGAGCTCGACCCCTTTGAACCAAGCTGCTGATCTGATTCTCCAAAGGGATATATATGGATATATGGATCCTTGTTTCTGCTGGCTTCTGCCACACCCAAAATTTGACTCCAAGTTCTAGAGTCTGAGTCTTCAGTTTCTGCTTCCCTTTGCCTGCTTTCTAACCATTTGTCTCTTGTCTTCTTCCTGTAAATGTCTCTCTGGAATCTGGCCTGCTCTGCCATCAACCTGGGCCCATCTTCTCAACTAAAGACACTTGCTCTGTGTTTCTCTGGCTCCTGCAGCCAGCCACGACTCTGGCCTGCCACGCCCACCTGCTAAATTGGGAGTTTCCTCTCCTCCCACTTGAAGCTGCAATTTGTTCTCTGTCTCCCAGCTCCGTGCTGAACTTCCCTCTTCCCGTCCTCAGAGCTGCGCATTTCTGTCTCTCTCTTTTTTTTAAAGATTTATTTACTATATATAAGTACACTATAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGACCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCACTCATTTTACTTTTTTTTTTATTCATTTATTTCATGTGAGTACACTGTCACTGTTTTCAGACACACCAGAAGAGGGCATCAGATCTTATTACAGATGGTTGTGAGCCACCATATGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCACTCATTTTACTTTTTGAGAAAAGATTTATCTATTTTTTATTTAACGTGGATTGTTGTTTGGCTGTATGTATGTCTGGGTGAGGGTGCTAGACCCCCTAAAACTGTAGTTACAAACAACTGTGAGCTGCCTGTGTGGATTGAACCTGGGTCCTCAAGAAGAGCAACCAATGTTCTTAACTGTGGAGGCATCTCTCCAGCTGCTCCCTTCCCTCCCCATCCCACCCCCGAATTTTTAGACAAGACTTTTCCATGTAACCACAAGCCCTGAACCACTACACAAAATGAAATTACAGCAGAACTATCTATTATGTATTCTTCCTTTGAAACTCATATGTAACTAAACATTTCCCACCTATTTCTCCATAAGTTCATCATAGACCCAAAGCAATAATTCTTTTGTCATTGATTAACAAAGTTTAAGCCAGCCAGTCTATAGTAGCAAGTTTTTCCTATGCTTAGCTGATGACAGTTTGTATTTACCAAGAAATAGATCAGCTATCTTATGTCTTAGTTTTGAAGTCTTGTTCAGCTAAGCTGACTAAACATCTATTCTCTATTCTGTTGTAGGTGGTTTTAAGCTACCGCCCTTTGCTCCGGAACCACCTTGCTCTGGAGCCCCCACCTGGCTTCCCTTCTGTAATACCCACTTTCGTTCTGAGAGATGACAGTGCTACAGCCCTCTCCAGCTTCTCTGAATCTGTGGATAAAAGACACACACACACACACACACACAGTCTGTTACTTCACAAATTGCCTTCTAGGCACAATTGCTGGGCATTACTATCTCCCACCTGGAAAAGCATGCCCTTACCAATTTATTATCTCCATCTCTCCACTTGCCCTAAACATCAGTGGCTAGTCCCACCTAGTCCCTGCCAAACATCCTTGGTATACCCATCAGAGCTGCCTGTTGCTCCTTCTGAGATCTCACATAAATGCTGGCTTCTTCTCCCTCCAAAGCATGTCAGAAAACTCCTCTCTCTCCTTCCTGGCATCTGCCTGTTTTTCCTGGGACCTGGAAGTCCTGCCTGTACCTTCTTCCAAGCAATTGCCCCTGGTTTTCTTTACTGACAAATCAAGAACCAATTGAGGAACAAGACCTTAGCATCAGAACTGGCCCCCTTCAGTATTCTTATAGTCATAATAGAATTATTTACTCTTTGTTCATAACCCTGTCTCTTTGTGGTCCACACTGAAACCTGTGACCACATCCCTAGATCACAAGATTACAACCTAGAATGAATGTTTTCTTTGATCATTAAATTGTCCCAAGCACAGTTTTTTTTTTTGATCATTAACTTGTTCAAGTACAATTATGTGCTTACAATGCATGAAAGCTCATTGCTCTCCTTTCTAACATATGCAGCCCTCACTATTCTATAAAGGATGGGATACATTCTACTCTTTTTTTATGCATATGAGTACACTGTACTGACACACCGGAGGAGGGCATCGTATCTCATTACAGATGGTTGCGATCCTCTGTGTGGGTAGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGTAGTCAGTGCTCTCAACCACTGAGCCACCTCTCCAGTCCTCACATTCTACTCTTATCCTAACTTTATCACATCTTTTTGGCAAAACAACTTCCACCATCTCCTTAAACATTTTATCAACTACCCTGATGTTCTAAAACTTTTTAAGCTAAATCAGGAATTCTGTAAAGTCGTTAGCTCATCTAAACACTATTATTTTATGAAAGTTTGTCTTCATAGTGATCTGCAGGAAAGAGTGGGCTGTCTCCTGAGAAGCAATCACACCAGACTCTGGACAGTGAGGGTCTCCCTGTGCCCATTCACACCATGCTAGATACAGGAGGAATATAGCAATGGCCAACATGAGAAGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTGCCTCTCCAAGGTATACCCATCAGAGCTGTGAGAATGGTGGACCATCTCCAGAAACCCACAGCTCCTGCATGGTATCTGCCATCTCTCCCTTTTAGATTAGTTAAAGGAAGCCAGTGAAATTCTCTCTAGGCAGAACATACAGCAGATGAAGATGACTGGAAGAAGAAAGTGAAACTGTAGCATGTAGTTTTTGCTACCCCACTTGAAACTTCAGACCACGCTACCAGCCCCGTCCAGGTTCTCCTGGATCCGTGGATGAAAGACACACACACACACACACACACACATTACCTTATTTTCAACCTTCCTTCTTAGCTCAATTGCTGGGCACTTCTAATCTCCCACTGCTAACGTGCCCTTCCAAATACTCTTAGCTCAGCACCCTAAACCTGCCCTCAGCTTTAGTTGCTACCCCAGGCCCAGTAGGGGAAGTGGCTGATGACCACTCCATCCTAGATCTCACATGGCTGGTGACCTTTTCTCCCTCTGAAACATGGTAAAATCTCTCTTCCTCCCTGCGTCTCCTTGCCTACTCCTGCCGGGACCCAGAAGTCTGGCCTCTTTCCTTCTGCTCAACAATTAGCCCCCAGCATCTTTACTGATAGATCAAGAGCTAGCTGGGGAACAAGACCTTAGCATAGAAACCACTCCCTACACAAAACAAGACAGTTAACCCTATAGTAATTCTTAAATGTATAAGGAAACTCCATAAGGGTTGTTTTTTAACAAAAGTTCTAACTGAATTAGGAAAGTAACTAGCTACTTCTTCTGCAGAAGAGACTTGTAACCTAGAATGACTAATAGCACTAACCTGAAAATACAGAGTTTCCATAATAATAGCAGGTTATGACCAATTCCAAACAGTTCACAGGTGCGCATGTTCTTGGTCTCAAGACCTCTCTGACCTATTATAGGACAAAGGAATAACACAAATCCATTTATAATTGACATGACACAAGATGGTTAAGTCTGCCTTTATATTTTGACTCTGAGTCCCCATGTAAACAATGGCTTCCTGTAAAACATTAGTCCTATCTGTTAAACCTGTATTGATCTTTTTCTGTGTAATCAGTGCTCAGGGAAGAGGTTGAGATAAGGAATTTATAAGGTGAGCAGTGTGCACCTGTTGTACCAAAGCAGGAGCTGAGGCTGACATAGGTCCCAGCATCTAGAATAAGTGTGGCAATAAGACTCTTTGACCTCAAGAGAGCATTAGCAACTCATTTCCAGGACATACATAGCAGAACCCTCATACCAAGACTGTAAAAGATTAACATGTGATGAAATATAAAGTGGCTGGCGTACTATGAGAAAAACATTAGGGCTCATAGTGGAATTTATGTAACTAGTCAAATAGCATTTTCCACAGGAAATGTTATATACAGGCTCGTTTTTAGTAACGTTTCTATCCCCTGGGTACAGAATGGCAAATGGTGATATAACCTAGCACTAGAGACCATCAGGAGCATCAGGAGCCAGGTCCTCAAATAATGATGGCTAAGGTGGGCGTGGAGAAAGTGGCAGGGGTGGAAGTCTCTGCCTTCAAGTTGCAGGGACACAGTTGCTAGAAGTAATGGCCTGTACAAATTAAGACTGGCAATGCCCCTGCATATGTCTCCGGTAAGATGAAGCAACTCTGCACAGTGAAATAAAGCACATATAAGAATACCACACAATCCTACAGGACAAGAAAGTTCTAATCGCACCTTAAAAGAAATGCTTATAAAACAAAAAGGAAGAATAAAGACACGCCCCCCCCCCCCCCCCGGGGTAGACTAAATAGTGCTCGGTTAACTTTCTGAACCTTAACGAGAAAGAAACGACAGCAGCTGAGAGACACTGGGTTATAGAAAAAACGGTGGAATTAAATCAGTCTATAAGGATGTGTCAGTATCAGAATGGAAGCCAGCAAAAGTTTTGCATTGGGGATGCAGATTTGTTTATATTTCCACAGGAAATGAGAAGCTATGAATCCCATAAAAACTGATAAAAATTAGAACTGAGCAGGGCAGGTCTTCTGAAAACCTTGGCTAATGACACAAAAAGCATTTATTTCATTGAAAATGTCTTTGTTTATAATTTCTCCATATACTCAGCACAATTGATGGCTTAAAACAGGAGTGGGAGAAAGTGGTGATATTTTTTGAGGATTCTGGAATTTTGGTTTCTTTAGGGAACACAGAAGTATTGTGAGAACATGCTTGTTTTAATCCCAGGTGTCGAAATGTGAAGGGGTTTCAGGCTGTCTGCAGCAGCTGACCATGATTTGCCTCCTGCTCTGCAGAAGTGTGGTTTTGTCAACTGCAGAGAGTTTTTGTTATTGTGTGATGTTTGGAATTCTGGGAACTTTTCAAAGGATATATATAAATGTGAGGGCCCAAGTGAGGGTGGGAGTTAGCTGTGGTTTGTTAGTAGCTGTGATCAAAGAAGAAACAAAAGAAAACAAATTATATTCAGGAATTTTTCTAATTCCTTCTTCCCTCTATTCTTGTTTCTTTCCTATTTAGTGTTAGGAGCAAAACCAGGCATAATGGGTGGGGAACAGAAGAACCCACAAAGTAGCAAAGACGGCTCCAGTGAGTCATACAAGAACTGTGATTGATAGTCTATCCTGATACACTGTAAAACAAGATCAGGAAAGTTCCTAGTCTACCTATGGACTGCATTTATGATTTAAAGTTTTATTTTAATGCTCAAGGATCTTCAATTAAATCTTGAATTCAAATCTTTAAGGCTCAACAGAGATAAAGCTGTAAAATCCTAATCTTAAAAAAAAAAAAAAAAAAAAAAGCTACTAACAGCTGGGCAGTGGTGGTGCACATTTTTAATCCCAGCACTTGGGAGGTAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAAACAAAAAACAAAAAACTTCTAACAGCTGGGCAATGGTGGTGCACATTTTTAATCCCAGCACTTGGGAGGCAGAGGCAGAGGATCTTTCTGACTTTGAGGCTAACCTGGTCTTTGGAGTGAGTCTGGGACAGGCAGGGCTACACTGAGAAACCTTGACTTGAAAAAAAAAAAAAAAAAAAAAAACCAACAACAACAAAAACCGCTACTGTCTTGTAAACTGCTTTGTGATTCATTTAGTGGCAAGTTTTGTTTAGCTTCCTGTATATGTTTCCAAGGTTAAGCCTAAAGCAAGTAACTGGAAACAAAGTTTGTTTAGCTCATATATACCTAATATGGAATGGCCCTCATACTCTTCAGCAATCTGTTGAATATGGCATTTAGAATGCTTAATAAAAAATCTTCCCATGCTGGGCAGTAGTGGCTCACACCTTTAATCCTAGCACTCAGGAGGCAGAGGCAGGTGGATCTCTGTAAATTCAAAGCCAGCCTGGTCTACAGAGCTAATTCCAGGACAGCCAGGGCTACACAGAGAAATCCAGTCTCAAAAAAGAAAAAAAGAAGAAAAAAGAAACAAAAAAAGGCTTCCAGCCGGGCGTGGTGGTGCATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGAATTTCTAAGTTCGAGGCCAGCCTGGTTTACAAAGTGAGTTCCAAGACAGCCAGGGCTACACAGAGAAAACCTGTCTCGAAAAAAAAAAAAAAATGGCTTCCCATGATAGACAACATACAATGTACAAAGACTGACCACTGCCCCCAATGAAGCCTTTCTTTGAGACCATGGGAGCCTAATGATAACTTATTTCTCTACCAGGGAAATGAGCCAATTCAAGCCACATTAGAGTAGATAAAGAAATAAGAGATATGTTCTATGGGGGTGTGGTGAGGTATGGGGGAGGGGGTGCCTTGTCGGGTGTATGCCCAAGCATCCCTTCCCCTGAGGGACCAGCCACGGTACAATATAGAATAGAGTTATAGAGGGGAGTTAAGAGGGTAGTAGAGGCAGAGAGACAGAGTAGAGAAGTAAGAGGCCAGCCATGAGCACGTGGAGACAGGGGGAAGGGAGGGAGGAAGGGAAAAGCCCAAGAGGGCAAGAGAGAAGCAAGAGATCAAGAGGCAAATGAGAGAGGAGGGGACAAGCAGCCCCTTTTATAGTGGATCGCCTACCTGGCTGTTGCCAGGTAACTGTGGGGGTGGAGTTTAGACAGAATGCTAACAGGTTTTTTTGGGAAGCAGTTCTCACTGGTCCCAAGCAACAAGACCAGAGAAGTCACCATGAAAAAGAAGTCAGAGGGGAGAGGGAGGAGAAAGAGAGAAAAAGTGTGACCACACAGGGAGAGAGAAAATCCAGAGAGGGGGAGAGAAGAAAGAAGGAAGGAAAGACCAACATGGTTTATATAGGAAAGAGCCTCTGGTGAGGGGAAGCCCAGCCCCTGGACTGGAAAGTTCAGGGTAGAGGGTCCTGTATCCTGTATGCCAGGTAGGGGCTGAGGGATGCAGGGAGAACTTGGAGGCCAGGACCACTCTGGTATGTTAAATATGAACCTCAGCTGTTTGCCCCAGAACTGAATTCCAACACCTAGAACAACTAGGGGGTAGGGGGTACATCTCTGTCATTTAAAATGACAAGTAGGCCATTCAGGTTATACTTTCTGCTGTCAGATCTCTGACTGTGTCAGTTTAACAACAACAACAACAACAAAACAGCTCCTTCCCCAGGGCTGCAGCTACCTCCATAGTTCATTTAAATCAGACCTCAGGCTCCCTATCCTAGAGCTCTTCATCAGAGAAAGACAAGCAATTTACCTCCCAAAGTCATAAACTCAAAGATAGTTTTAACCCAACTTCATTTCTGGGTTCCCAAATTTTTACTGTAAGCCAAAGGCATGGTTGACAGCTCTTCCTATCTTTCAGTATAGATTACAAAGAGTGGTAATACTAACATATCTAAAATTTATATCTCTTTTGATAAACAATCCTTTTAAGTCAACGTGGATCCCCCTCTCACAGGTCAAACAGTCTCCAGGTAAGTAAGTTAAATTTCCCTACCTACCACCTATTCGCAAGAATGGGATCCCTCCCTCCCCTTCTCCCCGGTTTTGAGACTTCCCTTCCCCAACTACCAGGACCATGAAGTGTATACCCAAGATAAAAATGTTCGCCTAAACTCTGTCTCTAGTCTATCTGTCTTGGAAGCTTTCAAACCAACCTCAGACTGCTCCAGCAACTCACCAGCCCCAGGAGTCTCTAACAAATCTGCATCCCAGATAGCTCCAAAGTGGCTAGCCCCAGGATGTCCAGCCTCACAAAGGGCTCTAGATGGTCCCACTGAGCTGGACGCTAGAGTGAAACAACCAGATTTCCCTCTCCCCTCCCCCCTCTCCCTCTCTCAGCCTTGGCCAGCATTCCAGCTTCCTTGGGAAATGAAGGCCCATGGCATTGGGAACAATGATACCAGTGTCAGCAGGATGTACTTATAGAAAGATTATGTTGCCTCTTGTCATTTATTATCAACAGAAAGGCTAGAATGGTATGTAGCAGAATTTTAGTAGAGCCATTGTATCTGGCATGAATTTTGGACTGATGGCACCCAGGCTTTGAAGTAAGTAACCGTTTGGTAAATAGTGATTGCTATGTGGGATTTATGGAGTTGCTCTTCCAACCGATGCACAAAGCCATTGCATAACTTAGTCCCAGACAAACCTCACAAACCAGGAAGTCTATGACTGAGAATTGCTTGGTTAATGGTTCGATAAAAGTGCCGTTTTTGTAACAATAAAGAGCTTCTGAAAATTCCCTGGCTGCCCAGTCCTTCAGAGGCTAATCAGCCCGCTGCTGAAAAGGCTAAACTCATTCTTCTTTCTCAGAATTCTAAACTAAACAGCTGAGATGACTATTTAACATATCAAAGTGGACCTGGCCATCAGGTTCTCCCAGCAGCCCTTAGTCCCAACCTGTTATAGGATCCTCCTTGCTGGCAGACCCCACCCCATACCCCGAACTCCGCAGCCCCAGGGCCGGGTGGCCCTTCTCCAAGCAGCTCTTCCATATCCAACCATGTGGTTCTTCTTTTTTTTTTTTTTTTCTTTTTATTCTTTTGGACTCTTGGCCTCCTGGGTCTCCTCTCTCCCCTCTCTCGTATGCCTCAGGGTCATGTGTGCCATAGACTCTCCTAGATCTGTTTACCCTTTTACCTACAATAAACCTTCTCTTCCACCATACCTAGGACCAGTCATAGCCGCCACCTTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTCTTCTTCTTTTCATTCATGGAAGAAATAATCAACCTAAATTTTATTAATAGAACAATATTTTCCATAGGTTCTTTGCCAGTAAGTTCTTTAAGCATGTTCTTTCCATCAGCATTACATCTATAGTCTTCTTGTAAATAAGGAACTACAGACAGTTGCAGAGACTTATGACATACATAACTTTCTATAATACCATTATCTTGTTGATATACAATTCCAGTAGGCAGTGGGGAGGAAGAAGGATAAATGTTAAGGAAGTAAAGAATTAATTCCATAAAGTATAGCTTCAGCACCATTGTTTAATAAGCTAATCACCCGCTTTGCTTCAGGAGTTATTATTTTTATAGAATTTAATGGAGTATCACCAGAAAACAACATAAAAAGCAGACTGCATACCCAACTGTCATGGACCAAAATTTCAAATTTTGCTATTTTAGTTTATTTACCATGAGAGGTAAGCATTTGTTTAAGTACTGATTAGAAGAGCAGGATAGAAGAATGTCATCACTATACTGAAATACCTCAGGAGATTTAATCAGCACTGTTAGCATTTCCTCTAGGCTCCTCCTAACAGTTACCTAACAACAGCCAGGTAGAGCTTGGTTCTAATATAAAAGGACCCTCCCTGTCCTCCTCTTCCTCTCTTATTCATTCTCTCTTTCTTTCTCTCCCTGTCCTCTTTCTCTCTCCCCACCTGTTCCAAGCTGGCCTCTTCTCTTCTTTCTCTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGCTGTCTCCTTTCTTTCTCTACCTTTACTCCCTTCCCCAAACCCATGTTCCAAATAAACTTCATTTTATACTGGACCTATCAAATGGCTGATACGTCAGGGTAGGGGGAGTGCCTCAGCATGGAGCCACTAAAGCACCCCTCCCCCCACATTACAAAACATATCAAGCACTAGGTCAGGTGTTCTACTTGCAATTGTTCCTGTACTAGAAGTTGGGCCAGTTTTAATTTTTCCCCATGGAGGGACCATTGATAATTTATATTGAGTTACTCCCATATTGAGGGGGAAAAAAAAAAAGCTCTAAGGCAGCAGAGCCTTAGCCCATGTTGCCACAGGTTAACCCACCCACCATTCCTTGGAACTCAGGTGTAGCTTGAGACACAGCTCTCTACATTCAGTAAACCCCAGGCCATGTGGCCATTGGCAGTTATGAGTCTCAGTAGCTTTGGAGTCTATTCCTCCAGCCCTGTTAGACCTGCTGAAATGTCTTCAACAGAAAATTCTCACCCCACCCCCCTTACCACTCTGATTCTTTTTTCGTTGTTTTGTTGTTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTTGATTTTTGGTTTGGTTTGGTTTGGTTTGTTGGAAAAGGTTTCTCTGTGTAGTCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCACCATCACACCCAACCCAAGCAATACACTATTGTATTCCAGCTTGCAAAATAATTGACAGGGATTTTATTTCCCGCCCCCATAGCCCCCCCCCCTTTGATAGGCTCTGATTCCATTAATTACGATGAGTTTCAGATTATCAACACTTATGGTTCTTTGCCTAGGAAGAAAGTTGCAGAGCTCTTGAGTATTTTGCTTCTTTGGATGTTAACAAACATCTCAATGATTGTATGAAATGCATTGTCTCAAAAGACTGAGTAGAACCCATGTTTATTTCCATTTTCTCAGGGTCTCCAGCCCTTGGGTGAAGGTTATTAATTTCCTAATTCCCTGCTCACAATACTTCTCTCCTTTCCTCTTTCATGCTATAACAAAACACTCTACATTCATACCCACAGCAGTACAATCATCTGGGTTCAGTCCCAAGGCAGAAACTGACTGTGGAAACCATCAACTTGTCAATTTTGTTCCCATCTCCTCCTCCCTCAG
Seq C2 exon
GAACCCACACTCTGCGCTATAATGTCAGAGCCCATTCTCTGGAGGGGTCTGAGAAGACCCAGCTCCTGGTCCTAATATACGTAGATGAAGAGCTCTTCCTGAAATACAATGGAGACAGCAGGGAGACAGAGCCCTTGGGATGCTGGATTAAGGGCCATGGGGGAAATGAGACCTGTGCAAGAGAGACTAACAATCTGTTGAAGGTGGAAGAGAAACTCAGGGGGATGATGGCTGAGGTTATAAACCAGAAGAGTCAGGAGGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000040987-Mill2:NM_153760:1
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.103 A=NA C2=0.071
Domain overlap (PFAM):
C1:
PF0012913=MHC_I=PU(0.1=0.0)
A:
NA
C2:
PF0012913=MHC_I=PU(49.7=98.9),PF074136=Herpes_UL37_2=PU(22.6=39.3)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Human
(hg38)
No conservation detected
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: