RnoINT0070969 @ rn6
Intron Retention
Gene
ENSRNOG00000006116 | Hk2
Description
hexokinase 2 [Source:RGD Symbol;Acc:2797]
Coordinates
chr4:113582617-113593987:-
Coord C1 exon
chr4:113593825-113593987
Coord A exon
chr4:113582766-113593824
Coord C2 exon
chr4:113582617-113582765
Length
11059 bp
Sequences
Splice sites
5' ss Seq
CAGGTACTG
5' ss Score
9.04
3' ss Seq
CCTCCTTTGTCTGTCTACAGAAC
3' ss Score
11.32
Exon sequences
Seq C1 exon
GTTGACCAATTTCTCTACCACATGCGTCTCTCAGATGAGACCCTTCTGGAGATTTCTAGGCGGTTCCGGAAGGAGATGGAGAAAGGGCTAGGAGCTACCACGCACCCTACAGCAGCTGTGAAAATGTTGCCTACCTTTGTGAGGTCAACTCCGGATGGGACAG
Seq A exon
GTACTGAATGTGTGGGTGGGTGTGGGTGGGTATGGGTGTGACTGCTCCAAGGATCTCTATTCTAGACTTTGTTCAGGGACATAGAACTAATCTCAGTCAAGGCCTCTTGCAAGGTTTAAGTCGATGAAAGCTGATGCCATCACTGGGAGGTGACCAGAAGGCTATGGGATGGGATGGCCATCTGACCACTTGGACAGCCACAGTCAAACCAGTGCTCCCTGTGTACCACTGACAGCCGTTTGTTTTCTGCTCCTGTGCTGAACAAAGCTTCTCCTCTCAGTTTGGCTTTCCCAGTCCCATACAGGTAGCAGAGTGGTGGTGGCTAACCATGGCAACTGTGGTTGATGGCACATTCTGTAGGCACCAGTGCCCTTCATAGCCCTTCCATTGTTTCATGAGCCCCGTTAAACAGTCCTGTAAGTTAAAGTGAACTGGGAAGAATGGGAAGAGCCACTGTGCTTATCCCAGTAATACTTCTTTAAATACCTGTCTATTTTTTATATGTATGAGTGGGTTGCCTGCATGTACACCACATAGGTGTCTGCCCGAAGAGGCCAGAAGGCACCAGATTCCCTGGAACAGAGGGTTGTGAACTGCCATTGGGTGCTGGGAATTGAATCCAGGTCCTTTTTTTTTTTTTTTTTTAAAGATTTATTCATTTATTTTATGTTAGTACACTGTAGCTGTCTTCAGATACACCAGAAGAGGGCATCGGATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCGAATCCAGGTCCTCTTAACTCAATTTATTTATGAAGTAACCCAGCCATTAATTACTCTTGACTGCTGCGCCATCTCTCCAGCCCCTACGACTAAAGAGGGAAGCTGTTGGTTGAGCTTTGTTTAATCTCTCCTATTTGGATAATTTCTCTTACGATGCCACTAAGCAAGATTGATGTTGGAAAGAGTGTCATTTGACTTTTTTGGGGAGACAAACATCTAGCCTGCCTGGTGCCCAAATTGTAGGCCGTTACAGAGCCTTCTCCCCTAAAGCATGTACTAGTGTTTGTATAGCCTTGAATTTGTGTCTTCCTAAGTGAGGCTAAATAATTCCCAGAGGGCCTTTCGCTTTTGTTGATATGGTGGAGGTGATGGAGGTTTCTGAGGGCATGAACAGAATCTCCCCACCCGTGTCAGTTCCTCAGCACAGGTTGGGTGTCTGGAGACGTAGTCTGGTCCCAGGGGGTGGGGGTTTTGATGGGCGGGGAGAGAAGATTCTAAGAGAATGCCAGGAGGCTGAACCTGCACGCTGGCTTTGGAACCCAGCACTGGCAAAGCCTTGTTCATTTGCCACAGCAGTCACCCATGTTCTTGACTGGTGTCTGTGGGGTCCACGAAAGTGGGAGTGCTGGTGTGAGCGAGGTCTTTATCTGCGGGGCAGGAAGCAGATTCTGAGAGCCGGAGGGAGGGGCTGAGCAGCCGGCGGGGGGCTGTGGTGGGCCGGTCTGTGTTGGAACCTGACCTTGGATCCCTGTGTGTCCTTGGGGAACACCTTTTGAGAGTCTCTTGGATCTGGCTTAAGAAGACTGTGTACAGTTCCTAAAATAAGAATATTTGTTGAGGCCTTGTGACCTGCTGGAGCCTGGCACTGAGCATGTGTCCTGTTAGTTAGAGTTGCTGAATGGGTGAGTTCTCAGATCTTCAGAGTCCCCTGAAGTGGGGAGAGAGGTCCCTGCGAGTTCTGCTGTGCCCTCTAGATTGGCACATTGACCACTCCTCTGTTTCATTCTGACTGGAAGTCACGCCACATCTGTGTTTCAGCTTGACATTCTGATAAATGTATCAACTCCTGAAGGGCGGCCTGTATCTCGCTAAGTAAGCACCTAAAATGTCGAAGGACATAGGCCTCGCTGGGGCGTTTCCCCAGCACCCACCCGTGTTAATTTTAAAAGATTTATTTATGTTTTTGTGTGTGAGTATTTTGCCTGTGTGCCATGTGGATGCCAGGAGCCCCGAGAGGTCGGAAGAGGGTCTTGAGCCCACTGGAACTGGAGTTACAGACTGAGACACTAGGGGGGGGGACAGAGAATCGAACCTGGGTCCTTTATAGGAGCAGTCAGTGCTCCTATAAACTTACACCTCTCTAGCTCCAATTCATTTACTCAAACGAAACTTCCACATTTATGTCTATTTTCTTTTTTTCTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACGGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCTATGTCTATTTTCTTGTGTGTGCGTGTGTGCACTTCTGTGAGAATGGAGGCTAACGGCTGCTCTCTCCTACCACGTGGGTCCTGGGTGGTGAAACGTGGCCTGTCAGGCTTGGCAGCGGGCGCCTTTTCCTCAGACTCATCTCGCCAGCCCCTAAAAGAAAAAGATTTTTACCTTCCTGTTTAAGAATATGAGGGCTGGATGGACAAATAATCTGTCCAGGTCCACACAGCTGAGCCGGGAGTCAGACGCGAATATGGCGGAGTTACCAGGTGTGTGAGTGTGAGCGAGCATGTGCCTGCCCGGGCCTGTGCATAGCTCTGGGTGGTGGTGGTATGGGTTGGGTGACAGACAGGTGACAAGTGCCTATGACAGTTCAACTCTACACCTCTAAGTCCCATAGTCCCAGCCGTGTTTACAATGCCACCATATTGGAAATGCATCTTTGCCTGAAGGAGTACTACATACACAAATGAGCATGCTTAAGTACAGCTCTCACAACATGGTGGGTCGTGAGAAGACACAACCCCCTAAGTCACTGGATACAGATCACAGCATCCTTGCAATGGTACAGTCACTGAAACAGAAACTAGACTGTGTCTACCAGACAACGGACAGTTCTGTGCTAAAACCCGCTCAGGGTCTCAATGGTAGATACTCTACAGAAAAGGAGAGTCAATTTATTTACCGAGGACGGTCTCCTGGCAAGCAGGTGGTGTGAGCCAATGCCCAGCGCCGAAGCACACCACTAACTAACGGCATGTTTTATTTTTTTTCCCCCGCGTTCCTCCCACGCGCCCAGCACAATGCCTTCATTCTTCCTTTGGGAACTCTGATTTGGTTTGATCCACAAAGTCCCCTCCTAGGTTTAGTGATCTGTGAGGCCGTGGTGTGCCAAGCCTCTGTGGCTTGCCTTTGAAGAGGGAGAATTGTCCTTAGGGAGATAAAGCTTACGCAGAGGAGACAATTAGAGAGTGATACCGGGCCATATAACGCTAGCTCGAGGTGCGATAAAGGGAGACAGACCAGCTCCGTGATAGGTTCTGTGCTAGCTGCTGAAGCCCCTTATCTTGGTTGCTGTGTATTAGACCAACATCCATGCAGCGGAGGCCTGAGTCAACAGCAGTGCACAAGCGAGTTAATAAGGGGGTTTATGATGTGGTGCTGACGATCGATCTAAGCAAAGACAGCACTGATAGCCTCCCCAGAGTGGGTGGCATTCACATATGTTGAGTCAAACATCTCATCGTTGTATTGATTTTTTTTTTTTTTTTAAGATAGGGTCTTACATATAGCCCATGAATTGTGTCCTACAGCAGTATTTATTGCCAGTGGGGACTTCTGGACAGGTGTGGGTGGGTTCCTTTCTAGGGGCTTAGAATTGTTTACAGGGCCAGTTCAGAAATGGAGTGTAGAAGTCTACTTGTATATCAGTGAGTGACCTGGAAGCACATGCCGCCGTTTGCCGCTTCCGGCATTGGGTGGCCAGAAGGTCTGGGAGTCCTGTGAGTCAGCCCAATGCAATCCATTTGTCTAGTTAGCTAGGCCTAAGATTTTCCCAGTGTCACCATTGGAAGTCCCATTACCCCTCTACACTGGGTAATCCAATGCAGGAGGATGACACACACACACACACACACACACACACACACACACACACACCCCACCCCCTTATGTGGCCCTTGAACCCAGGCCCCCACCGCTCCTTGGCTGGGCTGTTGTGCAATGCTCTAGTCATCTCCTTGACCCTAGACACAGTCCATCCCCTTCGGGTTACTCACACACAAGCCTTTTGAAGACACAATCTTATCTGCTTGGGAGCCAGACAGTTCCCAGTGACAACTTTGACAATGACACTTGCTAGGTGCTTATAGCCCCCATCGCATCAGCTCTATGCTGTAGCTGCTTTCGACATGATGTATCTGGTGTAAATTGGTGCCATATTCTATAGTTATGCCAGACTGGCGCCCTGACATGACACGCTGACACTTAACCATGCTGTGAACGTCCACGTATGCTGACTGTCTTTCCATCTAGAGTATTTACACTAACTCTTGTTGCCTGTACCTGAAAGGTGTTCTTGTAGGAGCAGAAATGACTCCTCTATATCATTCCCTTTCCTCCCAGGTCTGTCTGTGGCCGGGTCACAATCAGGACAACTGTGGCACTTTTAGGGGCTGTCCATTCTCATTGCTGAAGCAATTGATGGCAGGAGAATATCTGATTTGAAGATTCATGATCGATTTAGTTCTCTCTCTTTTTCCCCCCCCTCCTTTCCTTTCTAAAATTTCATTTTTGTGTGTTTACTTTTTAAGACCAAGTAGCCCAGGCTGGCCTGGAATGTGCTGTGTAGATCAGGCTGCCTCTGCTTCTTGAAAGCTAGGATTATAGCACATGCCACTACTCGCGTCCCTTCTATTTAATTTTTTTTTTTTTTAAATAATTACATATATGCTTGGAGTTTGAGCACATGAGGGCATTGCTCTGGGAGGCCACTAGAGGGTGCCACATTCATGGAGCTGAAGTGAAAGGTAGTCGTGAGCTGGACAATGTGGATGCTGGGAACCAAACTCAGGTCCCCAGGAAGAGAGCAGTGCATGCCCTTAACCATTGAGACTTATAATAATCTCCTGGTTTTGTTTTTGTTTTCTGTTTTTAACTTTCACAATAAGTTTTAATCGTACATTTTATACAGATGACTGTGAAGTCTTTTTACTAACGTGAAGTAGTAAACCGAGAAGTAGAGAACACAGACAGGCGCTGGCCTTCCTCACAGCGGTGAAACAAAGAGTGTTCAGTGCCTCAGAGCATTGACAGTGAGCAGGGAGTCTCACAGGCTGAGGCATTGTGGATGGGCAAAGCGAGGGGGCCTGGGTGGTCACTGGCTTTTTTGACTGTTTACTCTGAGTAATCGCTGTACTTGAGGCTTTGGCAGGAGGTGCTGCAGCAGAAGGATTGCCGTGAGTTTGAGGCCAGCCTGGCCTAGAAAGTGCAGCCTCATCTTAAATCCAAAACCGAGGCAGATGGCCCAGTCCATGCAAGCACCAAGCTCAACCAGCTGAGTCTGTTTCCCGAGCGAGGCTTCATGGTGAAAGGAAAAGACAGACATTCCCACAGTTGTCCTCTGAAGGCCATATCCACTGTAACTGAAGGAAATCTTATGGTGCAGAACGAGAAGTAGAACTAGAGGTGAGGGCGCAGGAGGTGAGCTGTTACTTAGCTTCCCCCTAGCCCTTGCTCCAGACAGACCTGGCCACCTTTATGCTTGCCTAGAATCTCGGGATCTCTGTGGGGTGCCCCCTTGTTTAGAAGGGGTTCCCGGATACCATCATTTGTAAATCATCTGTTTAATTATCTGCTGTAGGGGCTTAGCCATGCTGACCCAGGAGGACACCTCCATTTCTCGACACACTTACCTCAGAGGACCGGGAAAGGTGGCTTTGAAATACAAGGCCAATCACCTTTTTATTGCAGAGCCTTCTTAAAAGGGCTGGCCCTGCCTACTGCACTGAGCGCCTGATGGGAGGAGCAGGTGGTGATCTATTTTAATTAGTGGCAAGTACCTAATGGTTGAAAATAGAACCTCCTGGAACATTCAACTGGCCACTGTCCCTCACTCAACCTTAAAGACCAAAGAGAACAAGGCATGTGCGTGTACACACACACACACACACACACACACACACACACACACCAGCCATCACCAGGTACCAGATCACCTCGAGGAAGCTTTCAAACAACCCAGGAGTGATGAATGAATTTCCGGTGTCAGGTTACTCCAGGTGACTTTGACTACCATGTTTAGATGGGCTAACTGCCACTTAGTGCCCTGTCTTTCCTGCGACAGGTGAGTTCCCAGGAGAAGTTGGAACTCTTTATCTCACTGACCTTAAGCATCTGATAAGAGTCAAGCTGAAAGTGGGCTGCTGGCTGTGTGGGGGTGGGAAGTGAGTCTGCAGAGACAAAGCTGGAGCGAGCAGCCTCGCCCTTCCCTGTTGGGCGATTTGATGAAGGGTGGCGCCACCCCGTCCCTCTCTGTCACCCCTTGCTGAGCTGTGTGCAGAAGTATTTCTGATTTATTTTGTATGTGTTATTTTATGTGTATGGGTGTGTTTACCTGAAGAACATCTTAGAGAGGCCTGAAGTGTAAGGTGGGTACAGAGGCTTGGTGGAGTTAGAGGAGAGTGCCAGTTTATTCTGCGCCTGTGCACGCAGCCCATCAGCAAGCTTCAGCAGGCCCTACAGTGGAGTGGATGGTATCTCTTGCTGCCGTCCCTCCACTCCATATGGTCTAGTTTCCATCGATAAGCTGGAGTTCCTGGTACAGATGTGGTTGCTTTTGCTTTTCTTTCTCACTGCTCTGTGGTTTCCAGGAATTGGAGCCACAAAGAGGAAGCCGTGGTCCTGAAGGAGGGGCCCAGGCTTTAGAGTCAGAAGCCTTGGCGTCAAACCCTAGCTCTCTCTCACCCCTTTGTGACCTTAACCAAATGACTCAACTTTAGAAGGATCACTTCCTGACCCCCAGTCCAGCTCAGGCTGCTGTTGCCTCCAGGTTTTACACTCTTGGCATTGCAAGTGAAGAATTCCCCTTTGAGGGTTTACAACTTTCAAGTGCTTACTTATTATTGTTCAAGAGAAACCCTTTGGCTGGCCCAGGTCAGAGTCTTCGCTGTGATTGAAGGCAGCGACATCACTCCCATCATATGTTAAATGTTTTATTCCATTTATTTGTTTGGCGTGTGTGTGGGTGTGTGTGGGTGTGTGTGGGTGTGTGTCAGAGCAAATTTGGTGATCCAAGGAAAACTTGTGGGAGTGTTTCCTTCTGTCATGTGGATTCCAGGAATCGAACTCAGGTTGTCAGACAGGGTGGCAGTCACCTTTGCCTAGTTAGCTGACTCATCTGTTCTCGTATATATTTCACTTTTTTAAAAAGTGAAAGTTAGGATCCAGTGATAACAGCATGGTTAACAAAAAGTCAGAAGACGTGATCTAAACCCTTAACAGTTGCTAGGCAAACATCTTATTTAATGAGTGAACCATTGATTCAACAGGAGGTGGTAAGTTGCCTCAAATACCAACTGTGGTTACCTAGAGGAGCCTACTCTGAGCCTACTGGGTTCTTTCTTTACCTGTAGTTTTGGACATCCTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTTTCGGAGCTGGGGACTGAACCCAGGGCCTTGAGCTTGCTAGGCAAACGTTCTACCACTGAGCTAAATCCCCAACCCCTAGACATCTTTTTTTTTTTTTTAAGATTTATTTATTTATTATATATAAGTACACTGTAGCTGTCTTCAGATACACCAGAAGAGGGCATCGGATCTCTTTATAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCGGGTGCTCTTCACCGCTGAGCCATCTCTCCAGCCCCCCTAGACATCTTTTTAAAAGTGTATTTTATTGTGTATTATTTTAAAATTCATTTTACTTTTTTTAATTATTATTTTGAGGTAAGGTCTCTCTGTAACTGACTGTCCCCAGAACTCACCATTTAGACCAGGCTGTTTTCAAATTCACCGAGATCTGCCTGCCTTTGCCTTCCGATTGATTTAAGGCATATGCCACTAAGCCCAGCTTAATTTTTATTATTATTCATTTGTATATTTGCCTGCTTGTAGGCATGTGCACCGTGTAAATGCAGTAACCATGGATACTAGAAGAGTCCCTTAGAACTGGAGTTTTAGGTGGTGGGGAGCTGCCCGATGTGGGTGCTGGGAACCCACCTCATTTTCTGGAAGAGTAGTGCTCTTTCTTAACCCCTGAGATGTCTTCAACTCTGCTTGTATGATTTAAGAAACTTCCTTCTCATTGGACTGAAAATCACTATGTAGGGGGCACTGACTCCGGTCTCAGCCCCCTAACCAGTGGGATTATGGGAGGATCACCGCGCTGGGCTAAGAAGCCTGCTCTTGGTGGATTTTCTTACATCAGAACCTTTCTCCTGCCCTGCCCACAGATACTTTTGCCCTTCACATTCACAGTCTGTCACATGCTCTGGTGAATGCTATTCTGGGATTATGGAATGTCTTGGAAGGAGCCCAGTGGAGGTAGGGCTTTGAGCTACGATTTAGAGCAGCTAGCAAGAGTTAGGAGAAGACCTTTTAGACCAAGGAATGATGACAATGAAGGATGACAAGGTCAGTGGCACTTTACTGACAACTGTGTGTTATGCACGTACATACCTGTGCAACCTAGTCTGTATTCCACCAAAACCTCGCAAGTGCCCTGGCAAGTCAGCGCCATAAGCTGTGAGTTCTGCGGTGAGGCCGCATGCCTAGAGAGCCTGTTGAGGTGCCCAGGCCACTGCTGAACCAGAATTCATGAGCCCCGACCACCATGTGTAAAGGCTGTCACCTAAGCCCTGCTCTGTGGGGAGTGGTCATCTGCAATAGAGAGATTGGGCCTAGGAGGATCCCTCCATCGCCTTGTGGGGTCCTAATAGGATTTCTGGAGTCACCGTCTCATCTTCTGAACTCAGAGGGTCAGTCCTTGGGGCCGTGAGTGTGGGTGGAATATATTCTGAAGGACTAGTGAGTGTCCCCCAGTTCCTACCAGCACCCTTACTATTTACAGTCCCCTTCGGTCCACCAGAAAATACAGCCGAATCACATTCCTGATGGAGCCATGCTGGGCCGAGTCCAGCTGGGCTGGTCTTGGATGATAACCAGCCAGAGGCAGTGCTGGCCACCTCCGTCCTCTCATGGTCACTGATTCAGCGGATCGTGTGTGTCCCGGGCCTCAAAGTGCTGATGAGGCAGCTCCCCCTTGATTTTTCTCTTTCATCCCCCTGACAACCACCACATAGCGTTTCCTAGAATCTGGCTGAGGCCCCATGGCCAGTGAAGGTTGGGTACTCGAGTGTCTAGAAAAGTCATCTGAGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAACCAAAAAAAAAAAAAAGAAAAAGAAAAGTCATCTGAGGCCACGGAGAGGGGGTGTCCACAGTGAGTCAAAGCTGGTGTTGCCGTAGCAAGCCTTTAGTGAACAGGCCTTTAGTGAACAGGCCTTTAGTGAACAGGCCTTTAGTGAACAGGCCTGCAGTGAGCAGGCCTTTAGTGAGCAGGCCTGCAGTGAGCAGGCCTGCAGTGAACAGGCCTGTAGTGAGCAGGCCTGCAGTGAACAGGCCTGTAGTGAACAGGCGTCTGGGGTGAGTAGTGGTGATTCCTTCAGAAACCCAGTAGTAGGGAGTGGAAAATTTGTATCAGCGAGAGGAATGCTAAGTCACCCGGTCTGCTTCCAGTGGCTTTTCCTGGAAAGGTATCTACTGTCTCCTTTGCCATTTGAGAGACCGGTCTGAGACTGTGTTTGCCATGAGCCTGGTGCTTACTTGTTCTTGCTATAATTCTGGGTGATTTCAAGAACATTGCTCAGTTCTCTCAGGACAGTCCTGGGCAGTATGATGCTCCTATTTAAAGAGGACAGAGGTCAGAATTCTATGTGTCTGAGGAAAAAGAGGCTCAAGGCTAAAAAGTAGCCAGGCAAGGATTCTCACACACTTAACATACGTGGGTTTCAGATGAACGTTATGTAGACTAGCACTGCACCTGACCAAGTGTATGGGAGTGAGTCCCGAGGACCCTCAGTTGGTTGATACCCATCCCAAGCTTTTGCATTAAGAGATCATGGACACTGGGTTCAGGGAGCTCATAAGAAGTGGCTATCCAGGGTGTGCGTGGGCAAGGTGCTCAGGGGTCCAGAAGTCCTGAGCACAGATGAAATCCTTTAGTTTATTTAGTCAGGACATGTCTTTGACCCTCCCAACCAGACCAGAGTCTCAATGTTGACCATCACACTAACTAGTGAGTCCCTTCTCTACCCAGAAATGAACCCTACCCTCTTAAGGAGAAGGTGAGGAGGCTAGAAGGTGTCTGGGTGAGGCTGCGGTCACTGCTTTCTCTTCAGGCTCCTGAAGCCTGCCATCCTGTCCTTCCTGTGGGCTTCGGGGTTCTTCCGCACGTTCTTTCGTTATTTGCTTACAGTTCCGTGACTCCCTGCAGCCATGGTGCTTCCCAGTCCCATTGGCTAGTTTTCCGGTAGGTTAAAGTCTGCAGGCCAATCTGATTGGTGGAGCTTCTTAAACTAAACTCTAGTTTAAGTTCATTGACAGGCTAAGTAGGACGGCTGAATGATTCAACTGTCTCATTGGTGTGAATTACAAAGTAGTAATAAAAATATCTTATTATTGAGGAGGCCAGGCATAAAGCTGGGTGTGATGGGACATGTCTATAATCCTGGACTCTGGAGGCAAGTCTCGGTTACACACACACACACACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGTCTGTGTGAGAGAGAACCAAATGTATTTAGAAAAAGTGAGCCATCTGGCCACCCTCACCCATGACTGCTGACTGGTACTGAAGTCTTAACTGGTTTTCATGAGGCAGTTTGATCTTGTCTTCTTCCAAATTGACAGTGGCCCTCCTTTGTCTGTCTACAG
Seq C2 exon
AACATGGGGAGTTCCTGGCTCTGGATCTTGGAGGAACCAACTTCCGTGTGCTCCGAGTAAGGGTGACGGACAATGGCCTCCAGAGAGTGGAGATGGAGAACCAGATCTACGCCATCCCTGAGGACATCATGCGGGGCAGTGGAACCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000006116:ENSRNOT00000008813:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.036 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0034916=Hexokinase_1=FE(26.2=100)
A:
NA
C2:
PF0034916=Hexokinase_1=FE(23.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]