RnoINT0111262 @ rn6
Intron Retention
Gene
ENSRNOG00000029938 | Pik3c2b
Description
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:RGD Symbol;Acc:1306541]
Coordinates
chr13:49850189-49870168:+
Coord C1 exon
chr13:49850189-49850568
Coord A exon
chr13:49850569-49869144
Coord C2 exon
chr13:49869145-49870168
Length
18576 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGGA
5' ss Score
9.79
3' ss Seq
TTTTTGCCTGTTGCCTACAGGTC
3' ss Score
10.34
Exon sequences
Seq C1 exon
TGCCGGCGGCCTGGGCCGCGGTCCTGGCAGGAGCCGGTGAGCCTCGCGCGCCGTGCAGTGCGCTGGCTGTCCGGGAGATGGCTTCTCCCCGCTCGCCCGCCGCTCGCGCTATTGTCTCACCCGGGGCTGCCTGACTGCGAGCTCGTGCACGCTTTCAGCAGACAGCACCGGGCCCCGGACCGTCCCCCACGCCCGTTGCTTGCCCGTGTGGTCCCCTGCAGCGGGGATCCCAGAGCCGCGGTGCGGGCGAAGGGAGCAGGCGACACTGAACATCACGCGGGGGCTGGAGCCGGGAGCCTCCGAGCGAGGCGGGTCGGCGGAGCACTAGACACCCAGCCACGACAGTCAGGGTGTCGCGGCAGAACCCGCGACCAGCGCAG
Seq A exon
GTAGGACGAGCACGCGACGGGGAGCACAGCCCCGGGGCTGCAGAGCGCCCTCTTAGTCGGGGCGGCGTGGGCAGGGCTCCCGCCCCGAAGCGCCAGCGTCCGGGCCAACAATGGCAGGGCCGAAAGCCCAACCGGCTCCTCGGAGCACGGCAGGTTGCTCGCCCCCACCCCACGGCTCGCCTGCGACTGGCGGCCTCGGCGGGTCCGCACTCTCCTCCTCCTCCGAGTGCAGTTGCAGGGCAGTCTGGGGCCAGGGTACCGCTTTGGAGTCGATTTGTTTATTAGTTTGTTTAAGAGCAAAACCTGTCCTGGAGTGGGGGTGATGGGAGTGGTGCCTTCCTGTGCAGCGGGTGAGAAGTCAGCGTCTAGCCTCGGGACTGTATACATTTTCGGCCAGGCGGAGGGTAGGGTTGGCCTTATAAGGATACTGCAGAAGCAAAAGACTGAAAGCTTGCAGGAGAGACTAGGACCTTCAGGCCCGAGTCCCCCGGCCCTCTGGGAAAGTGCTCCTTTTCAGGGCAGTACTTGCCCCTCATTTCTCAGTTCCATACAGCAGCAGCTTTGGTGTTGTGGTGCTATGATAGAAGCTGGAAGCCCCAGCAAGGCTGCTGAGCTGGGGTGGGTGGGGTGGGGAGGCCAGGGGCTTGGCAGGCTTCTGGGATGTGAAAAGAGGTTACCATGGATGAGGTTAGTGCATACACCCTTGTTGTCTAGAGGTTGAAGTGTCTGCACTCTGCCAGTGCTTTTGCTCCTTCAGGCTAACCTGGCCCTACACCTCACCTCCCTTTTGGTATCTTTGTGGTTTCCCGGTCCCAGCCCACCAGTCATATTTAGGGTGGAAGTTCTATTGTGTCTGGTTGCCCTGGTATTTTTTTTTTTTTTTTTATTCAACTTGGTCAGAGAGTTCTGCAGTTTGGACTGATGGACCCTAGCAGAAGTGGGCTAGCTAGTACAACCCCTCCTTTCTCTAAACTACCTGCTTGTCTGGGATACCGCCAAGCAGATGTAAGCGATTTTGCGCTGAATTCCAGCTCCAAACCAAACCTGAGTGAAAACTTACCCCTTACTTACTGTATTTCCACCAGGCCTTGGAAAGAGATTCAGGAGAGAAAAGATCCTGGAATGACAACCCTGGCCCACAAATATTCTCCCTCTCTCCAGCTGCAGCTCCTGCAGCCCAGTCAGTGAGCCTGAAGCTCCTTCAGAGCCTGGCTGCCCCATTCGGGGCAGCATCCATGGAAACATTAAGTTGTGGCACATTTTATAGCCCTGCCTGACAGCCTGCAGTGTCTGAGGAGATGGTGGCTTTGAACAAGAGCCCTGGACCCAGACTGTGGCTGCTTCTCCTTTGGCTTTTGGGTAAGCCCAAGGTTTGGCTCCTGTAGCTCAGAACTTACTGCCTAGCGCATGGGTGTGTGTGTCTGAATCCCATCAAGCTCCCAGGCCTGGCCAGAAGGCAGCCCATCCATTTTCCTTTCCACTGGAACACTGAGTAAGGAGTGATCAATTAGCTTATTTTGGGTCCTGGGCATTTTTCTGGGGTGCTCCTTTGGATTTGCCTGTTGGTCTGGAATGTAGCTTTTTTTCCCTCTGCCATGACCTAATTGTGCTCCTACAGACACTCCACACCCTTGTAGGCCCCTAGGTCTCTTTGTGGTGCCCTGCCCCAGAATTTTAAAGGTGTAGTTTGGGCTGTAGGGAGCATCGGTGAGAAAAATGGAGGAATCTCTGTTTCTTTGGGGATGGTGTGACTGATCACAAACTTCCAAGTTCCTCCTGCTTCCAAGATTTACACCTAGTCCACACAATGGGGAGCGGTGGAGAAATGAACCGGAGGCTCGGCTTTGAGTGAACCCCGGTGAGACTTCCTTCCTAGACCTGTGAACACGGACCGGACCATTTGTGAATTTAACTTCATCTTCATATTCGTAAAGTGGGAGGGAGGGTATCACGGCTCACGGGATTGTTTTAAATACATTCCCTGAATGAAATTGTGCGTGCAAAGACAATCAGAGAACTGCAGAGTACCCCACAAAGATCAGCTATAATATCCGTCCTGAGAGAGGAGGGAAGAGTCCGGGGTGTAGATGGAGTAGGAGGAGGGGAATGTGGAGTAGGGAACATCCCAGAACCTTTCCTGTTTGAGTAAGGGAAACATGGTGTGATAATGTAAGTGCTATTCCTTGTGTGTTCCTCTTTAAATAGAGCTGACAGATGGGAACTGGGAGAGAAGGACTATTTAATGGTTGTAGGGGCTTGGGAGAAGGACTTTCCAAAGGCTGCCTACTGCCTGTGGATAGGGCAGTGCTGACCTAGCAAAAATCATAATGGCTAACAAGTCCTGGTGTCAACCAGCGAGTGAGTACGTGACAGAGGTGGGATTTGAAGCAGGCAGGCTCCCCGCAGACCCCGTGCTCATAGCTCAGTATCACTTCCAGAGATAGAGACCAGGCAAGCAGCACAGATATAGAATACAGTTATAGAGTCCCTAAATACCCCAAAGGTGGCACCAGACTGGAACCCACCTTAGATGAGACACTTCTCGAGGACAGGGGACTTGGGGAGATAATTCACATACCCAGCCTGGCCCTGCTGAGCATGATTCCCCATTGTTAAGAAGTGGAAGTGTGGATGTGAGAAGCCTTGGGCTCCCATATTGCTTGCTTTTCCTGTCAGGATAACCAGATCAAGGCGTTTTTGTTGTCCTGGCAACTTCGGTAGTAGATTTGGGCTTAGGAGGCTCTGGAAAACTTAGGACAGCTTCCTTGTTCAGTGGTTCCCAACCTCCTAGGCTGCAAGCCTTTAATACAGGTCCTCGTGTTATGGTGACCTCCCCCCACCATAAAATTATCTCCTTACTATTTCATAACTGTGACTTTACAACTGCTATGAATTATAATATAATTTGTAATATATCTGCTTTGCAGGGTATTTGATATTCTGCCCTTGTGAAAGGGGTCACCAAAGGGGTCGTGACTCTGGGTTGAGAACCGTAGTTTTAGTATATTTGTATTAGATTAATTTGGGGTATGTGTGCGTGCGTGCTTGTGTGTGTGTGTGTGTGTGTTGTTCATGGGGGGGTATGGTTGTACATATACGATGGCATGCATGTGGAGATCAGAGGACAACCTTCAGTTCTTGCCTCTCACCTTGTTTAAGAGTAGGTCTCTAGCCAGGAGTAAACCAAAGCTAGCTGGCTCCTCCTGGATGGAGATGCTCCTGTTTCTGCTCCACATCGCCCTGCCCTAGAGCATGGGCTTTTACCTGAGGTCTCCTCTCAGCCCTCAGGATAGCGGATAGCGCTGCAAGGATACCCTAATTGAGCCCCTGCATCTGGTTTTGTAAAACAAATGTGAGGAGATGGTTCTTATCTCCCATGAACGGACAACGTGTTAGAACTGAGCAGGACCTTGGAGATGACCTCCTTGAGAAGTGGCCTCAAGGTCAAAGCTCTGCTAGCAGCACCGGGACTTGGTGCTGATTCCAGGGCTCAGAACAGAACCTGCTCTTCAGTTAGCGCTTCAGCCAACCCTGTCGCTGGCTGGCTGGCTTCCTTGTTGGGAAATTCCCCTCAGAACCCAGGGAATAGAATTTACTCACTCTGGTTAAGCAGACTTAGAACTCTAGCTGCTATTCCTCTGTCCTGAGAGCCCCCTAGAGAATGCCTCATAGTACAGAATTTCAAAGAGAAGTCAAGCTCCTCACTTGCCTCTTTGGAGACATCTTGATGTACCTGTGGCAACACCCCTCCCGCCCCCCACTATACTTCTTCAAAACAGTGCTTCTCAGCCTCGGTCACAGACACTAAGCATTGCTGTCCCCACAGGCTACTTTTTTTCCTTTGTTTTTATTTGTTTGACACAGGGATTCACTAGCCCAGGCTGACCTCAAATTTACTATGTAACCTAGCCTGGCCTTGATCACCTTCCTCTGCCTCCTGTGTGCTAGGATTCAAGACATCCGCCACCATACCTGCCCAAAGTTTCTTAGCTAGACTTTGAACCCAACAAAGAAGGATGCCCTCGGGCGAAAGTTCAAGTCCACAGAAAAGTGGGAGGACACGACAAACGATTGCCACCATAAGCTCTCCATTTGGTAATGCTCAACACCATTCTCTCTCTTCCTCTCTCTACTCTCTCTCTCTCCTCTCTCTGTCTCTCCTCTCTCTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGTACTCATGGTGCCTGGTACCTGTGGAGGTCAGATGAAGGCATCAGATCTCTGGAACTAAGTTACAGATAGTTGAGCCATCATGTGGCTGCTGGGATCGAACGCTGGGTCTCCTGTAAGAGCAACCTATGCTGTCATCCACTGAGCCACCTCTCCATTCCCGCCTCGTGTGTTTAACCATAGCACTATGGAGACTATAAGCAGGAGGATTACCTCACGTTCAAGGATAGTTTGAGATACACGGTGATTTCCAGGCTAGTCTAGGCTGTAGTATAAAACCCCGTTTCCCACAAACGAAAACGGATTAGTGGCCTGGTGTCTGTGAAAATGCTTTATAGCTGTAAATACCTACACGAGGTATCACTAGCGCGGTACCTCGTATAAGTGTGTAAGGAAATACAAAGATTTTGGAGATGCTCCAAAGAGACAAACAGCAGAGGAACTAAGCCCAGGCTCCTTCGTAGAGGGAGAGTGGGTGCTAGAGGAGTGGAGGGTCCACAGGAGTGGCAGCATGTGAAAAAACACTTAGTAAATGTCAAGGCGTAAGTGGATGTGAAAGAACTGGGCTGGGACTCTAAGTGGAAGCCCTTGAGTACCTGATAAATAAAGGGAAAGACAACTTTTTTGATTAAAAGGTTTGTCTGTTTCTGCATTTGTATTTATGTGCACTTGTGTGCAGGTGCCAGTGGAGGCCAGAAGGAGGCACTGGAGCCCCCCCCTCCCAAGCTAGAGTCACAGGCAGGTGTTAGATGTGGGTGCTGGAAACTGATAGAAACTGAACTGGTCCTCTGCAAGAGGCATCTCTCTAGTCTCCTGTTTTCTTTGGTCAGTTAGCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTGATAGGGTCTCATATAGCAGACATCTTGAACTCACTATGTGGCTGAGGCTGGCCCAGAAGTCCTGAACCTCTTGCCCTGAGCTCCTAAGTGCTGGGGTTGCAGGCCTGCACCGCTATGCCCTACTCTAGTTTATTTGCTTTGTGGGAAGGGATCTGAAAGTTGAACATAAGGTGCTTGGTTTTTTTGATTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTTTGAGAGATTGTCTTACATAGAGTACAGGCTGGCCTCAAACTCCATATCCTCCTGCTTCTCCTTCTCCAGTGCTGAGATTTACAGATGTGTGCCAACATGCCTGGTTAGGTCCTTTTTTTGAGTGGCCTGGGCAAATGAAGTAGTCTAGGGGTGTAGAGGGAGAGCATGGGGGAGGGGCGAGTTCCAGAATGACTGCCAACATCAGTGTGAACATTTGGTCCGATGCAATGAGCCTGGGTTTCCATGAGAGCCTGGGTTTCCCCTGTTGGTTGGAGAAGAGGGCAGGATGGTGAATTTTGGGTTCACACGAGTTTCAGTTTAATTCTTGATCCTATCATTTTCCTGGTTGTGTGACCTTGGGCAGGCTGCTTAATCCCTTTCCTGTTTTATAGTTTCCTCACCCGTAAAATAAGTATTTTAATATCGACATTTAAGGACTGTTGTGTGGATCAATAAGACAATACCCAGCACAAAATAGCAGAGGAATAAAAGGCCAGTTTCCTTCTTTCTTCCACTGCCTCTGGACCCCTCCCCCAGCTGCTGACAAAACACGATGGCATTTGTATGTTGTGGAGGTATTTCCCTGGCTGTAGATTTCCTTGCTCCAGTGTGCCTGGCCTTCAGTCACACCCTGGGTACACACACCCAAGCTGCAAGCTATCCCCCCTGAGAAAGTCCTACACCTGCTGCTTCTCTGGAGACCCTGGGTGAGGGCGCCATTAAGAAGGTGCTTATGAGTATGCTCTGCTGAGCCAAGTGGCCCTTTTTACTGAGGGTAGGTTTAGGCTCTTTCTCCCTTGGGACCTTCTTATGCAAATTGGAGGATAGCAGATGGGAAGAAGGTGTCAAGCCACATACCTAAGAGGTAGCACCAAACTGCCTGACACCTCCCTCCCACGCCCATCACTTTCTTCTTTGAAATTCTATATGACTTTCCCGCCCGAGACTGGAAACAGACTGGAAACTGTTGAAAGGTGGTCAAGGAGGGGGTTCTGTTCAGCCGTCATCCGGGCTCACTGAACAAGCATGCAAGGTATACATACATACAGGGCATAGGGAGACTGAGGGCAAGGAGATTGGAAGAGGGAACTCAGGGAGCTTCTAAGGCCTTTGAGTGGTAAGTGGGATAGAAAGAGGAGAAAGTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGCCTTTCAAGTCTGATTCAGGTATGGATGGGAATCAGGGCTTAGTCAGGCCCCACCCTTTTGTACCTACAGCTGAAAGTGTCGAATACAAACTGACTGTCACTGCCACATGTCTTGGGTTAGCCAAGCAGGGGAAGCCTGGCAGAATCCCCCTGAGGTCTGGTACCATCACAACCTTGTCTGCTCCCCACTCCTGGTACCTCCTGTAAGTATTTCCTTCCTGTTGCTCAGAGGTTAGGGACACTGAGGATCTCCAGGAGAATATCTCATCTCTTAGGCCCCAAATGGGCTTTTTTTTTTTTCTCTCTCTATTAGAATGGATGTAGTTGAGTTCTTGCTCAACCCTCTGGTTTGGGTCCTTGACTGACTTAGAGAAAGACTAGGCTATCCCTCCGGGCTGGTACCAGAGACAGGGGGAAGCTCTCAGCTGGGAAGGCTGGATCAGGCTAAGGATGGAGGGATCAGTGAGTCCAAGAGGCTACATGACGAGCAGTACTAGATCATTCTAGAGCAGGAGATTGTGGGCTCAGGCCTGGAGACCAAGGGGGCCTGCACTAGAAGGCTATAACCACCACTCTCTGATGGATGATCGTCTCTCCCACCAAGGTTTCCCAAGGCCGTGTGGTCTGGCCACTCTTCTTCCTCAGCTCTTTAAATGCAGATTGCCCTTGAGGGAGTCACACCTTGGCCTCTCACACCCCTGTGTGAATTAGTCTCTGATGCCCAGTTGTATTCTGTTGTAATGGGGACTTGTTTTTCCCCCTCAGTGAAAGATGCAAACTGGTTCACTTTCTTTTCTCACGTCTGTTGTTCTCCTTGTCTGTGTTGATGCTGTGGTTTCCTCCGGCCTTCCTGAATCAGGAAATAACTAGCCATTTCTGGCACTTACAAGAGGTCCTGGAACCCTCTGGGGACAGGCTCTCTGGGGTCTGTATTTTCCTGGAAGTCTGTTTCCCTGGGTGCTCCACCATATAGGCCAGAGCTGGGGTGCAGAGAAGCCAGAAAACTGCATGGGAGGGGACAGGGCTATTTATCATTTTTTCTTCAGAGTTAACCTACTTTTCTCAGATGTCTTTGCCAGTGATACTAAGAATGTAACCTCAGATCTGAGCCATCCCTCCTCTTCTTAGGAGGCAGATGAGGGAGGAAGGGAGATGGGGGTGTGTGTAGCTGTGAATTCCGAAAGTGGGAGTGTAGGGATATAGGAAGATGTAAGGAGGGGTGGGGGGAGGATCCAGGGTGATTGAGAGGTGTGGGGTGTAGGGATTTGAGACAGGATGAGTACAGAGTGAGCAGGGGAGGGTGTGGGATGGGTGTGGAGTGGGAGGAGGTAGGAAGGCTATGTGTGGGATGGGAAAGGTGTGTGGGGGATAAAAGGCAGGACCATGCTCGGTTTGTGTGAGTCTTGCAGCTTCCGTTGCTCAGGAATGAGTGCCGTCTACCAGGGACTTCACATGGACTGAATATACTCCACCGTGTAAGCACGCGGCTACAGTGCTGATTTAGGAATGGCGTAGAGGGAGGACCGTGATCAGGGCCTGCAGACACAGCGGATGACGCTTCCTACCCAGGAGAGATAGAAGTTGGCTTCTGGCATGGCACCCGGACTGGTCAACCCCTTTTCTGGTTCTCAGGGACGGTTGGTGGCTTGGCCCACAGCCTTTCTCTGCTTAACTTACAGGGCCAAGCCAGTGGCAGACAGCTGCTGGCGGCCCACCGTCCACACAGCTCGTCACCGCCCACTGCTTCGCACATTCAGACTTACAGGCAGTCACCCCTGCCCTCCCTACAGATAGGACTACTACAGGAGGATGCCTGCTGGCTTTCTTTACTCCATGTACCTGATCATTCCGAGTCTCACCCCATGGGCCTCCTGGTCCCAGAGCTCTTGTATATTTGCTTACAGGAAGAACACAGAAACAGAGTCTCCTCCACAGGGTCTATGGCTCCTATTCCTCCTTGCAGCAGCTCAGTGGGTGCCTTACTCTCTCCTGTCACAGACAAGAAGACTCTATCTAGAAGGGAGTTTAGCCCAGAAAGTTGTTATCAGAAAACCCTCAAGGATTTGTTACCATTTAAAGAAGGCCCTGCAGACATTGTTCTGTCCTCTGGCTGGTCCCAGGTTTGTGCAATTGCCCCAACGTTCATGCCCATTATACCAGAGGCTGGACCTAATTTGACATATTCTCCAACGCCGTCTCCCTGCTCTGTGCCAGCTCCAATGGGTTTGCACAGCCATGGGGGACTTGGAAGCCACCATTAGCACGGCGTGATTGATGGGTAATACCCTGCTCTTGCTCTCCCCTCTGGGGAAGCCTCCAGTCCAGCCGGGTGTCTCTCTATCCTCTGCCCTGACTGGAGAGGATTGACTGTAACCTGTTGGTGGCCTCTGTTTTCCTGGGCTGGGTACTTCTGGGAGGGCTTTTTTTTTTCTTCCACCCAGGAAGGAATCCTAGAAAACTGGATTCCATAGTGTGTGAGCTGGGGGATCTGAACTCAGGCTGCAGGTGACGGTGCTGGCCTAGGTTTTATAGGAGGTCTCAGTTTGCATGAAGCAGTGTTGACACTGAGAACGAAGATGGCTGATAGTGAGGCAGAACCCCTGTGTCGCATTCCCCTAGTACCTGGCCTCTGTCCGCCTCCGGAGCACAGTCTCGGTATCGCACAGTACCTATATAGCACTGTAGTGAGTGAGACAAGGGCTCCCCACTGTCAGTGTGTGGAAGTGGGGTAGTTTGGGGAAGTAGGGATGGGGGTGTGTGAGAGTTGCATGGATGGGACAGACCCAACAGTTCCCTCTGCTGGAGGCCATGTTTGGTAAGATATGGTCCTCATAGGAAGGTCCTGCACTCCCTAGAGGAGCCCGAGGCTGGACTGAAGGAGACTAGCTTGTTTGGGGGACTCTGGTAGGGGAAGGGAGGGAGCACAAAGCAGGAGCCATGGAGCCAATGAGCCAAAGGAGGCTGCTTTAATTTGACTAAAAGGACCACTTGCAGGGGAAACGATTCACAAGGGTTAAAAGAACACTGCAAAGAAAGAATATAGGCCAGCGAAGAGAATGACCTTGGTGCGTGCAATGGACTGTGGCCTTGCCTTAAGTTAGGGTTACTACCACTATGACATCATTATGACCAAAAGCAACCTGGGAGGAGAGGTTGGTTCTGCTTATACTTTCAATTAACAGTCCGTCACTGGAAAAAAACAACTGGCAGGAACCTGGAGGCGGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTAGTGGCTTGCTCTCCAGGGCTTGCTCAGCCTGTTTTCTTCGAGAACCCAGGACCACCAACTCAGGTTTGGGCATCACCCACAATGGGCTGGGCCCTCCCCCATCAATCATTAAGAATATGCCCTATAGACTTACCCACAGCCTGATCTCACAAGTGAATTTTCTCAGTTGAGGTCCCCTACGCTCAGATAGCTTGTGTCAAAAAACTAGCCAACACAGGCTTCAATACAAAAGCAGGGAGTGAACCTTTCCATCTTCCTGGGGGAGGAGCTGGGCTTCTGGCAGGAGACCCGGGGATTTAATGATGTTCCCTGTTCCTGCTGGAGTTGGTGAGGAACAGGAAGGGCAGGGCAGCAGGTGTGTGGTATGAGGTGTGGGGCCTGGGCTCATAACTGTAAAGCCACTGCAATGTGAGTTTGGGAGATGGATAGAGCCAGAGGTCTTCCTTGGAGGGAAACATGGACCAAAGGGATTAAATCCTTATGGCAAGCCACATGCTCTGGGCCTTACCTGTAAGCTCAACATTTGGTGGATCAAAAGTTCAAGACCAGCCTTGGCTACATAGTAAGTTACAGGCCAACCTTGGTCTTCATAGAATCCTGTCTCAAAACCAAACCAAACCAAACTAACTCAAGGTATGATGACACATATCTTTTATCCCAGCACTTGAACAGCAAAGACTGGTGGGTATGAATTTGAAGCTAGCTTGGTCCACATAGCAAGTTCCAGGCCAGCCAGGAAGACCTTTTCTCAAGAGGGAGGGGGAGGGGAGAGGGAGGAAGCAGGAGCCGAAGAAGAAGAGGAGAAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAAGAGGTAGAAGAGGAGGAGGAGGAAGAAGAGGTAGAAGAGGAGGAGGAGGAAGAAGAGGTAGAAGAGGAGGAGGAGGAGGAGGAGGTAGAAGAGGAGGAGGAGGAAGAAGAGGTGAAGAAGGGGAGGAGGAGGAGGAGGAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAATCAAACAACAAAAATCCATGTCCTCCAACCCCTGGATGGCGTGTGTTCCAAGGGAGGTACTTCCTAAGACGGCATAGGACGAGTTTTCTTCCCTTGAGTAAAAGCTACTAAAAGCTGGGTTGTTCAGGGCTGTGTGAGCATGAGGCCCTCCATATTTTTACCATCTCGTCTGAGAACTCTCTGTGCTCTTGCCCTGTGAGGTATAGCTTAGGGTATGAGGTTCCTCCCTGCTCCATGCCCCAAGGAGGGGTTGAATTATTTACATGTTTACCACCTTTGCCACACTGAGCGCTCCCTGGAATTACATGCCAATTATCTGAATGTTCCCTGTATTTGACGATTCTCAGCATACTGGTGTCAGTTCTGTGGTGTGGACTTTGGAGAGGAACTAACCCAGAGCCTTTAGGTTCTTTGGATCTTGAGCAGGTCTGAACTACAGTGGGGTGTCTGGAAGCTTCTTGGCCAGCTATCTGCCTCAGGCCTCCCTCTCTGGCACAGGCTCACAGGAGGGAGGGCCTGCTTTCTCCCTGCTCTCTGACTCTGCCCTGGCCGCATTGCCCTTCTGCCTGTCCCTAGTCATTTGCGGGCCTCTGTATAGCCTGAGTATGTTGCCTGGTACTGTTCAGACCCTGGCACCCATCTACGTGACCGTGAGCATGTTCTCTTCCTTCACCACCTGACTACCCTATCTTTGGGGGAAGCTGTCAGTTCTTGTCTTCCAAAGAACCCCTCACCTGTGGTGTCAAGCCAGCTGTACCTTTGATCACCAGTGAAATGGGTGCAGTCCAGGGACTCACCCTACTGAGTCATGACTCCAGGGAAGGGGCCAGGAGTTTTTATGTGTTGGAAACGCTCTCCAGATGACAATTACAGGTATTCAAATGTGGACTATTGGACTACGTAGGATGTCGTCCTGTGAGTGTGATGTTTTGTGGGCGAGCTAGGAGCTTTGTATTTACATAAATTGCTGTGCTACTTAGGAGATCCAAGCTGAAGTATTGATAGCAGTCCTTCGAAATGCTTAAGTAGAAACAGAACACAGACTGGTGTGTGAAGCTGGGGAGGGGAACCTGGCTGTCAGCGATTTCCCTCTCTTCTGAGATCTAAATGGCAATTGGCTCCTTGATCTCTCCCTTCCAGTGCTGGGGTTCAAATGCAAAGCATCAGGAGGCTCAGTGGTTAAGAGCACTGGCTATTTATTCTTCCAGAGGTCCTGAGTTTGATTCCTAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACACCTACAGTGTACTTTTGTATAATAAATGAATCTTTTAAAAAAACAAAAAAGCAAAGCTTTCTATAGGCCAGGCAAGTACTCTGTTTCTCAGCCACACAGCCTGGGCCACTGTTTGCTTTTTTTTTTTTTTTTGATTGATTGATATTGATTGATTGTATATGAATGCTCTATCTTCATGTACACTTGGGTCCCAAAAGAGGGCATCAGATCCCATTACCCTGTGGGTGCTGGGATTGAAACTCTGGAAGAGCAGCCAATGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCTGCTGTTTGCTTTTTAAAAGAATTCCTAGTACCCTTTAGGACCAGTGGACCAGAGCAGTTTCCACTGTGTCTGCCCAGCCAAGGCTGGTGGGGAAGAAACTCCATTGGACAAGGGAGGCTCAGGGGACATGAGGCCCTGGTTACTGGAATAGTTGGTCCCCACACCTGGAAAATGAAATCCCGAGTTTTTAGAGGAAGCCAGTTCACACTGTCTGACCTCCCCTTTCCTCTCTGAGCCTTGGAGATTGCTGGGATGCTGTTTGTCCTGTCTCCTTGCTTCCATGGCTGATAGCCTAGCATTGTTTTTGCCCACAACCAGAACTAGAGGGCACTTTGTAGTCTTTTGGTTCATCTGTGCACCCCTCTGCCCTATCAGTACCTAACCCAGCCCCACTCTGTGTTGGAAAAACCCTATGCAAGGATCCCTCTGTGTTCCAGTCACCCATCACCTCGTCTATAAAATCCTCACTGCTACAGACTTCGGTCCTAATATTGTGACTCACAGCCGTTCTTTGTGGAAGTATGTTAATTTGGAGCTTGATAACCTCAAGAGAATAACTTGTAATTTTTTAAGTCTTTACTTGTTGATTTAGTTTGTTTTGAGACAGGTTCTCATGTAGTTCAGGCTGGCCTCAAACTCGTTATATGATTGAGACTGGTTTTGAACTCCTGATCCTTCTGCCTCCATCTCTTGAGTCTTGGGATCATGAATGTGTACCACTGTGCCTGACACGACTTTTAAAACTAGCTTTTCTAGTTAAGTTGAATTCTGGATACAGTATTTTAATTAAAAATTTGTATATTAGCATTTTACTTGCATGTATGCCTGTGTACCGTGTGCCTGGTGCCCTGGAGACCAGAAGAGGATGTTGGACGCTATGGGAACCAGAGTTACAGACAGTTGTGAGCTGCCGTGTGGGTGGGTGCTGGAAATTGAACTCAGGTCTTCTAGAAGAGCAGCCAGTGCCTTCAACCACTGAACCATCTCTCCAATCCCGGAATAAAATATTTTAAGACCATTTTTGAGATTTGTGTAAGGGACGTGGGGTCCAATTTGGGGGTTTGGAGAAAGCTCTTAAAGAACGTAATCTCAGAGTGGAGTCACAAGAGGATAAGTTAGAGTCACACGAGGGAGCTGGATTGAGAAAGCTATGCCCAGATGCACACGCTTGCATCAAGTCAAGAGGTGTTAAGTGCATAGGGATGCAGGCGGAGGTGACAGGGAGAAGGGCAAGAGAGGCCTTGTAACTGAGGCCAATAGAGAGCCATTGAGAGGTTCTAGGCAGGAAGTGCAATGATCCGATCCACACTTTAGAAAGAACCCCCAAGCCTTGAAGAGGAAGTGCTTGTGGCAGGCAGGACTGTTAGGAATCTGTTATAATAGTTCAGGAAAAAAAAGGGGGGGGGGCTTGAACCAGGACAGTGGTAGTTAGCACAGGAGGAAAGATTAGCTTTGGGGTGTGAAGAACAGAGTCACAGCCGTGATGGGACTTCAGATGAAAAAGAAGGGCTGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAGAAAAAAAAAAAGAAAAAAAGTAATTTTTTTTTTATATGAGCACATTATAGCTGTTTTGAGGCACACAAAAAGAGGGCATCGAATCCTATTACAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATCGAACTCAGGACCTCGGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCGTCTCTCCCATCCCAAAAGTAACCTCTAAGGAGCCATGGAAGGGTGGAGAGGTCAGCAGGTGAAGAAATGAGCAGACAGCTGCCTCAAGCTCCTTCATTTGGGAACCTGCTAAGGACAGTAGTAATCACACCTCAAAGCCATCTACAGCTCTAACCAGATTTGCCAGGGTCCTGGGAGGGCACCTCAGCTGGAGGAGGACCCGTCTCCTATTTTGAATTGAGTAGAACTTAACCACTCAAGAATCTGACAGAGCTGGGGGTGTGGTCAATGGTGGAGCACAAAGCCCTACTTTGTATCCTTCCATTCCTGTGCATGTGTGTGAACACCCCCACACATATTCCCCCACACCACATACATACCACACTCACCACGAACACACCATACCACATACACACATCTCATACATACTCGTACATGTATACCATACCACCACACATGTAGCACACGTGCACGCCCACACATACAGATACATACACATACCATACATACCACACCGACTTACATACTTCCCATCCTCCACAACAGACCCCACACCACACACATGCCACATACACATACCACATACACACACACACACTCCCCCCACTCCACACATGCCACACCACACACACAGACCACTTACATTCTCATACATGTATACCACCCCACACACACATACCACACATACCTTGAGCTCGCACAAGTGCGCACACACACGCCGTACAGACATGACCTAGGTGTGGTGGCACATACCTATAATTGCAGCACTTGGGAGGTAAAGGCAGGAAACCCAGGAGTCATTTTCAGCTACACAGTTCACCTGCCTGAGTTACAGAGTCACAGAGTCAACAGAAACCAACCAACAACACACAAGATCTCTCTGAACCTTTCTACTGTTGTTTTCAACTTCACGGTCATGAGGTCAACTTCATGGTTCACACTACATGGGTTTGTTACCCCTTGCATGAAGCTGCCCTGTAGAACAAACACCATCTGATACTTTGGTGTAACAGTGAGCTTCCGGGATGCTGTTGCTAGAGGTTAGAAGCGACTGCTCCACACCCACAACCACAAACACAAGCTGTAGGATCTCCTAGGAAACCGTTCTATTGATTTTTATTAAATACCATTAGCCTACCACAGACCAGTTAACTCAGAACCTATTGCATGAGTGGGCATTGAGCTGTGAATAGTTCCTGTCCTTCTAAGCTACAGCTCGAAAGCCACGCGACAGACCGACCTCGTCTCAGCTCTTTTCATGTTGTGACTTCGGAAGCAGAAGGTACCAACCTCGGGGTGAGCGGCAGACTCTTATGTCTAAAGAGCTGGCCTGTGGTTCCTATCTGGCTTCCTAAGGGCCAAGGGATCATCCGTATGTTGGCAGATCCATATCCAGGCACTATGTCTCACCTGTCGTTGAACTTCGAGTAATTATAAGTCTGCTAAGTAGAGCTGTGTTGTACATTTACATTTTGCTGGGGCTTAATTGACATGCCACAAACAGCATATATTTAAAGTGTACAACATGATAACTTTGGCATATGAACACACTGATGATGTCACTGCCGCCCGGCAAGATAATGAATGGGCTGCAGGCGTAGCTCAGTGGTAGAGTGCTTGCCTAGCATGCTCGGGCCATAGTTGTGATCTCTGCAGAGAGGGAGGGGTGGAGAGAAAAGCCAAAACCAGATAATGAGCATATTCATTGCTCCCAAAAGTTCCCGTCTGGCTTCGGTGCTCCCCCAACCCCCAGATAAGCACCCATCTGTTTTTTCCTCTCGGTCGCTCCATTTGCATTTGCAGAAATTTCCGGTACATGCAGCGATATAGGCCCATACGCCTGTCTGGCGGGTTTTATTCAGCAGAATTAATTTGGGACTCATCCACGTGCCTACGTATGTCAATAATTCATTCATTTTCATTGCTAAGTAGCACTAGTCGATATATATGTAGATGGATCACTTTCTGATTTGTTTAAGACAGGGTCTTAACAGAGCTCAGGACAGGCTTAAGCTTTTTATGCGACAAAGGATAACCTTGACGTTCTGATCTTCTTGCTTCTACCTCCTGACTGCTGGGACCCTAGATGTGCGTCATCATACTTGGCTTTGTGTGTTTCTGGGGTCAAACCCAGGCTTTGCGTACGCTAGAAAGCTTGCTGCTAACTGAGTTCAGTCCCCATCGGACTTCATGTTTTCAAAAGAATCACCATACAAACATTTGGGTCATTTCTAGTTTGGGGATTGTCTTAGTTAGGGTTCCACTGCTGTGAGCAGACACCATGACCACAGCAACTCTTGTAAAGGACAGCATTCAATTGGGGCTGGCTTACACTTGTTCAGAGGTTCAGTCCAATATCATTATGGCAGGAATCGTGGCAGCATCCAGGCAGACATGGCACTGGAGGAGCTGAGAGCTCTACCCTCTTGTTCCGAAGGCAGCTGGAAGACTAGCTTCTAGGCAACAAGGACAAGAATCTCTAAGCCTACCCCCACCGTGACACACTTCCTCCAACAAGGCCACACCTCCTAATAGTGCCACTCCCTGGGCCAAGCATATGCAAACCGCCACAGGGATATTATAAGTAAAGCATCTATATTCAGTATTTGAGGCTTATTGTTTTGTTTTGTACTCATCTGGAGTGCATTGTGTATTATCTATTTGTAGTGCCAATATCAAGCTCAGCCTGTGCACACAAGGCAAGCGTTCTACTGATGAGCCATAGCCCCAGTCCTGTATTTAACGCCTGTGGACAAGTCTGTAGCGCTGTGCGATTGAGTCATAAGCAGACGTGCACTTGCCTTTCCAAGGTGGTCATGCTATTTTACGTTCCACTAGCTATGTGTGACTGCATGGGAGCTGGTCTCTCTCTTTTCTGTTAATTTTTGGGTGTTTTGTTTTGGTTTTGAGACAAGGTTTCTCTGAGTAGCCGTGGCACTTACTCTGTAGTCCAGGCTGGCCTTGAACTCAGAGATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAGTAAAAGCCTGTACCACCACTGCCCCAGCTTCTTTGATAATTTTAACGTCTAGATTTATGTATTTTTATTGTATGTGTATGGCTGTTTTGCCTGCGTGTATATGTGTGCACCACATGTGTGTCTGCTACCCTGGGAGCTCAGAAGAGGGCATCAGATTGACTGGAACTGGAGTTAATGACAGTTGTGAACTACCGCATGGGTGCTGAGAACTGAACGTGGGTCCTGTGCAAGACAATGCTCTCAGCCCCTGAGCCATCGCTCCAGCCCCTTCTTCTTAATTCTTGTTCTGAAACATCTCCCATGCCACCCAGGCTGGCTGTGAACGCCTGGCTTCTGCCTTTACCTCCTGAATGCTTGGATTATACCAAGTGCCACCATGCCTGGCTTAATTTTTTTTTTTCCTATGGCACTGGGGTTCAAACCCAGGGCCTTGAACCTCCCAGGTCAATGTTTTACTACTAAGCCTTGTTGACAGACCCCTCTCCTTCTAATTAAAAAATACTTAACTGTATTAATATTATGTGCACATATAATAGAAGTAGGTGAGTGTGGGTGCGTGTGCCACACCACAGCGTGTGTGTGGAAGTCAGATGACAACTTTTAGGACCCGGTTCTATCTTCTCAGATGAGTTCTGGTGACTGAACCCAGGTCCTCAGGTTTGTACTACTAAGCCACCTCACGGTCACACCTAACCTTAATTTTTGAACGACACCTAGGCCAATGGTTCTCAACTTGTGGGTCGTGACACCTTTGGAACTCAAACAAGCCTTTCATGAGGGTCGCCTAAGACCACAGGGAAATACAAATATTTACATTATGGTTCATGATAGTAGCAAATTTACAGTTAGGATGTAGCAGTGAAATGATTTTATGGTTGGGGTCAGCACAGCATGAGGAACTGCATTAAGAAAGAGTCACAGTGTTAGGAAGGTTGAGAACCACTGATTTGGGCAGTGCTGGGGATGGAAGCCAGGGCCTCATGCACGCTGGACAGACAGACACTTTACCAGTGAGTCTGACCCTAGACAACCATCCTCTTTGGTTGAAGAGACCGGGCTTCCCGTTTTTTACTCTTAGCTGCTGCTAAGTACCTGTTTTTGAAGGACTCATGAAGGTTGTCCTCTGATCTCCACATGTATCTGTGGCGTTCGTGCCTTCCCCTAAGAGCAAACAAATAAATAATTGTTAAGAGGAATAAATCAAGTACCTCTTTCTTTCCTGGGAGCCCACGTGATGGAAGGAAGGATAAGAATTAGGACCAGAGATGGAGACGTGTGTACAAGGATGGCTGGATGGCTGTAATAGAGTTGCCCTGGTCTCTCTTTTTGTCTGCCTTTCTGTTTTTTTACTTCTGTTGTGGGCATTGAGGAAAGGGACAAATGGCCCGGATTATGTCACTTTATTGTCACAGTATCTGATTATTGATAAGTCTTGCTTTATAACTGAACTACATTTTTGCCTGTTGCCTACAG
Seq C2 exon
GTCCCGAGACAACATGTACCTGCTGCCCTCCATGCCGGACGCTGGCAGGAAGTAGAAGGCTTCGTCGTCGTCTCCTGTGCCCCTCGCCCTCATCATGTCTTCGACTCAGGGCAATGGGGAGCACTGGAAATCCCTGGAGTCGGTGGGCATCAGCCGCAAAGAGCTGGCTATGGCTGAAGCCCTGCAGATGGAGTATGATGCTCTTTCCCGGCTCCGACATCACAAGGAGGAGAGCAGGGCCAAGCAAAACACAGAGCCCTCTCTTATCAGCTGGGATGAGCCAGCCTTGGACTTCTACAGCAAGCCAGCAGGCAGGCGGACAGAGCTCAAGCTCTTGCGTGGTCTTTCTGGCTCTGATCCCACCCTAAATTACAACTCCATTTCCCCACCAGAAGAGCTCCCCAACTCTACCTCCCAGGACCCACAGCCTGGCACAGATCCCTGGCCCAAGGGCTCCCAATCTGGAGACTATCTCTATATTTTTGATGGCTCAGATGGGAGATGCTCTCTGTCTCCAGTATCAGGTGACACCGATGGCTCTTGTAAGAAACTATCCCCACCTCCTCTCCCTCCTCGGGTCTCTATCTGGGATGCCCCTCCCTTGCCTCCTAGGAAGGGATCTCCCTCACCCTCCAAGATCTCTCAGCCTGATGACATCAACAGTTTCTCTTTGGTGGAACAGCCATCTGACAAACTGCTAGGGGCCCAGGACCCAGGAGAGGGAGAGCTACCCAATGGTGGGGGACAGCGACATGTGCTGGGGTCCGTGGACTATGACGGCATCAATGATGCAATCACGAGGCTCAACTTGAAGTCCACTTACGATTCGGAGATATTGTCTGACGCTACCAGGGGCTGGAAGGAGGGCCGAGGACCCCTGGACTTTAGCAAGGACACCTCTGGGAAACCTGTAGCCCGGAGCAAGACGATGCCCCCTCAAGTGCCCCCTCGAACCTATACGCCCCGATACGCCAACCGAAAAAACGCAACACCTGGCAAGAACCGCCGGATATCTGCCGCTCCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000029938:ENSRNOT00000042125:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.813
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]