ENSG00000148400 @ hg19

Biotype

protein_coding

Gene Symbol

NOTCH1

Description

notch 1 [Source:HGNC Symbol;Acc:7881]

Coordinates

chr9:139388896-139440314:-

Assembly

hg19

Other assemblies

hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

The Cancer Genome Atlas (TCGA)
Genotype-Tissue Expression Project (GTEx)
Autistic and control brains
Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

HsaALTA0005783-1/2

Alternative 3'ss

0

NA

-

99.05

30.17

0

HsaALTA0005783-2/2

Alternative 3'ss

287

chr9:139396941-139397227

-

0.95

30.17

0

HsaEX0043385

Exon Skipping

263

chr9:139418169-139418431

-

96.77

26.91

0

HsaEX6064059

Exon Skipping

217

chr9:139396724-139396940

-

99.97

0.98

2

HsaINT0114807

Intron Retention

1623

chr9:139438555-139440177

-

4.05

54.6

0

HsaINT0114826

Intron Retention

693

chr9:139396941-139397633

-

12.41

46.87

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Mouse	mm10	ENSMUSG00000026923	Notch1	1-to-1
Mouse	mm9	ENSMUSG00000026923	Notch1	1-to-1
Rat	rn6	ENSRNOG00000019322	Notch1	1-to-1
Cow	bosTau6	ENSBTAG00000022799	NOTCH1	1-to-1
Chicken	galGal4	ENSGALG00000002375	NOTCH1	1-to-1
Chicken	galGal3	ENSGALG00000002375	Q9W737_CHICK	1-to-1
Zebrafish	danRer10	ENSDARG00000052094	notch1b	1-to-2
Zebrafish	danRer10	ENSDARG00000103554	notch1a	1-to-2
Fruitfly	dm6	FBgn0004647	N	4-to-1