Special

ENSG00000170921 @ hg38

Biotype
protein_coding
Gene Symbol
TANC2
Description
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:HGNC Symbol;Acc:HGNC:30212]
Coordinates
chr17:63009556-63427699:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
264
chr17:63237814-63238077
+
99.47
25.23
0
Exon Skipping
111
chr17:63151270-63151380
+
15.66
66.35
0
Exon Skipping
30
chr17:63412680-63412709
+
12.5
53.7
0
Exon Skipping
147
chr17:63415528-63415674
+
98.58
31.71
0
Exon Skipping
101
chr17:63418307-63418407
+
90.43
37.94
0
Exon Skipping
608
chr17:63354783-63355390
+
96.17
29.48
0
Exon Skipping
79
chr17:63396610-63396688
+
3.2
35.71
0
Intron Retention
6198
chr17:63389545-63395742
+
9.1
36.5
0
Intron Retention
2892
chr17:63395929-63398820
+
14.02
83.06
0
Intron Retention
6207
chr17:63398915-63405121
+
11.98
62.32
0
Intron Retention
5233
chr17:63406278-63411510
+
8.18
54.53
0
Intron Retention
1412
chr17:63412131-63413542
+
11.76
54.35
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000053580 Tanc2 1-to-1
Mouse mm9 ENSMUSG00000053580 Tanc2 1-to-1
Rat rn6 ENSRNOG00000052840 Tanc2 1-to-1
Cow bosTau6 ENSBTAG00000004249 TANC2 1-to-1
Chicken galGal3 ENSGALG00000000478 TANC2 1-to-1
Zebrafish danRer10 ENSDARG00000079004 TANC2 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000079097 tanc2a 1-to-2
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"