Special

ENSG00000182389 @ hg19

Biotype
protein_coding
Gene Symbol
CACNB4
Description
calcium channel, voltage-dependent, beta 4 subunit [Source:HGNC Symbol;Acc:1404]
Coordinates
chr2:152689290-152955593:-
Assembly
hg19
Other assemblies
hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
160
chr2:152828059-152828218
-
21.05
75
0
Exon Skipping
72
chr2:152698182-152698253
-
4.81
14.29
0
Exon Skipping
20
chr2:152727356-152727375
-
81.34
51.89
0
Exon Skipping
59
chr2:152725691-152725749
-
72.74
83.92
0
Exon Skipping
110
chr2:152717225-152717334
-
90.83
25.3
0
Intron Retention
214959
chr2:152739885-152954843
-
6.91
31.11
0
Intron Retention
1555
chr2:152727376-152728930
-
15.96
47.8
0
Intron Retention
230
chr2:152727126-152727355
-
19.89
59.14
0
Intron Retention
1295
chr2:152725750-152727044
-
18.43
63.4
0
Intron Retention
8356
chr2:152717335-152725690
-
11.29
34.63
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000017412 Cacnb4 1-to-1
Mouse mm9 ENSMUSG00000017412 Cacnb4 1-to-1
Rat rn6 ENSRNOG00000007666 Cacnb4 2-to-1
Cow bosTau6 ENSBTAG00000002297 CACNB4 1-to-1
Chicken galGal4 ENSGALG00000012511 CACNB4 1-to-1
Chicken galGal3 ENSGALG00000012511 B6IDG6_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000009738 cacnb4a 1-to-2
Zebrafish danRer10 ENSDARG00000062174 cacnb4b 1-to-2
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