Special

ENSG00000197768 @ hg19

Biotype
protein_coding
Gene Symbol
C9orf173
Description
chromosome 9 open reading frame 173 [Source:HGNC Symbol;Acc:37285]
Coordinates
chr9:140145713-140147934:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
33.72
27.62
0
Alternative 3'ss
165
chr9:140147114-140147278
+
66.28
27.62
0
Alternative 3'ss
0
NA
+
82.05
4.07
0
Alternative 3'ss
16
chr9:140147551-140147566
+
17.95
4.07
0
Exon Skipping
135
chr9:140146453-140146587
+
77.26
20.69
0
Intron Retention
341
chr9:140145849-140146189
+
90
94.86
0
Intron Retention
105
chr9:140146348-140146452
+
67.02
96.4
0
Intron Retention
301
chr9:140146588-140146888
+
63.59
91.96
0
Intron Retention
136
chr9:140146978-140147113
+
56.53
94.25
0
Intron Retention
149
chr9:140147418-140147566
+
83.68
91.76
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000036770 Stpg3 1-to-1
Mouse mm9 ENSMUSG00000036770 4933433C11Rik 1-to-1
Rat rn6 ENSRNOG00000010002 Stpg3 1-to-1