Special

ENSG00000198353 @ hg38

Biotype
protein_coding
Gene Symbol
HOXC4
Description
homeobox C4 [Source:HGNC Symbol;Acc:HGNC:5126]
Coordinates
chr12:54016931-54056030:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
44.71
42.02
0
Alternative 3'ss
70
chr12:54053917-54053986
+
55.29
42.02
0
Exon Skipping
149
chr12:54047769-54047917
+
8.55
22.83
0
Exon Skipping
445
chr12:54053917-54054361
+
97.26
14.04
0
Exon Skipping
49
chr12:54054478-54054526
+
18.28
75.15
0
Intron Retention
640
chr12:54053277-54053916
+
74.1
43.59
0
Intron Retention
488
chr12:54054362-54054849
+
12.17
44.74
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000075394 Hoxc4 1-to-1
Mouse mm9 ENSMUSG00000075394 Hoxc4 1-to-1
Rat rn6 ENSRNOG00000016613 Hoxc4 1-to-1
Cow bosTau6 ENSBTAG00000003304 HOXC4 1-to-1
Zebrafish danRer10 ENSDARG00000070338 hoxc4a 1-to-1
Fruitfly dm6 FBgn0000439 Dfd 4-to-1