Special

ENSMUSG00000026121 @ mm10

Biotype
protein_coding
Gene Symbol
Sema4c
Description
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
Coordinates
chr1:36548639-36558349:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
64.11
42.46
0
Alternative 3'ss
3
chr1:36556078-36556080
-
35.89
42.46
0
Alternative 5'ss
0
NA
-
62.4
89.23
0
Alternative 5'ss
306
chr1:36556497-36556802
-
37.6
89.23
0
Exon Skipping
127
chr1:36556803-36556929
-
16.73
48.34
0
Intron Retention
1938
chr1:36556078-36558015
-
20.54
84.62
0
Intron Retention
897
chr1:36550829-36551725
-
15.75
41.18
0
Intron Retention
263
chr1:36553989-36554251
-
5.99
52.73
0
Intron Retention
148
chr1:36553568-36553715
-
10.79
54.1
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000168758 SEMA4C 1-to-1
Human hg19 ENSG00000168758 SEMA4C 1-to-1
Rat rn6 ENSRNOG00000016254 Sema4c 1-to-1
Cow bosTau6 ENSBTAG00000021920 SEMA4C 1-to-1
Zebrafish danRer10 ENSDARG00000079611 sema4c 1-to-1