Special

ENSMUSG00000026784 @ mm10

Biotype
protein_coding
Gene Symbol
Pdss1
Description
prenyl (solanesyl) diphosphate synthase, subunit 1 [Source:MGI Symbol;Acc:MGI:1889278]
Coordinates
chr2:22895522-22940266:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
90.48
43.04
0
Alternative 3'ss
83
chr2:22912517-22912599
+
9.52
43.04
0
Alternative 5'ss
3
chr2:22915522-22915524
+
82.21
61.9
0
Alternative 5'ss
7
chr2:22915522-22915528
+
17.72
61.9
0
Exon Skipping
114
chr2:22929744-22929857
+
83.84
78.81
0
Intron Retention
4183
chr2:22935640-22939822
+
9.94
66.67
0
Intron Retention
4921
chr2:22901874-22906794
+
4.28
75
0
Intron Retention
101
chr2:22915314-22915414
+
2.26
94.87
0
Intron Retention
5701
chr2:22929858-22935558
+
17.15
87.57
0
Intron Retention
14015
chr2:22915525-22929539
+
9.51
39.29
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000148459 PDSS1 1-to-1
Human hg19 ENSG00000148459 PDSS1 1-to-1
Rat rn6 ENSRNOG00000048849 Pdss1 1-to-1
Cow bosTau6 ENSBTAG00000006529 PDSS1 1-to-1
Chicken galGal4 ENSGALG00000007559 PDSS1 1-to-1
Chicken galGal3 ENSGALG00000007559 E1BZW8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000017910 pdss1 1-to-1
Fruitfly dm6 FBgn0051005 qless 1-to-1