Special

FBgn0001148 @ dm6

Biotype
protein_coding
Gene Symbol
gsb
Description
The gene gooseberry is referred to in FlyBase by the symbol Dmelgsb (CG3388, FBgn0001148). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:25061964..25064643. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding. It is involved in the biological process described with 7 unique terms, many of which group under: developmental process; anatomical structure development; multicellular organismal process; regulation of biological process; multicellular organism development. 39 alleles are reported. The phenotypes of these alleles manifest in: adult sense organ; adult procephalic segment; adult thorax; pCC neuron; external sensillum. The phenotypic classes of alleles include: increased mortality; phenotype; increased mortality during development; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 00-12 hour embryonic stages.
Coordinates
chr2R:25061964-25064643:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
1031
chr2R:25062203-25063233
+
6.12
40
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000009709 PAX7 3-to-2
Human hg38 ENSG00000135903 PAX3 3-to-2
Human hg19 ENSG00000009709 PAX7 3-to-2
Human hg19 ENSG00000135903 PAX3 3-to-2
Mouse mm10 ENSMUSG00000004872 Pax3 3-to-2
Mouse mm10 ENSMUSG00000028736 Pax7 3-to-2
Mouse mm9 ENSMUSG00000004872 Pax3 3-to-2
Mouse mm9 ENSMUSG00000028736 Pax7 3-to-2
Rat rn6 ENSRNOG00000013670 Pax3 3-to-2
Rat rn6 ENSRNOG00000018739 Pax7 3-to-2
Cow bosTau6 ENSBTAG00000009950 PAX3 3-to-2
Cow bosTau6 ENSBTAG00000014967 PAX7 3-to-2
Zebrafish danRer10 ENSDARG00000010192 pax3a 3-to-4
Zebrafish danRer10 ENSDARG00000028348 pax3b 3-to-4
Zebrafish danRer10 ENSDARG00000070818 pax7b 3-to-4
Zebrafish danRer10 ENSDARG00000100398 pax7a 3-to-4