FBgn0003053 @ dm6
Biotype
protein_coding
Gene Symbol
peb
Description
The gene pebbled is referred to in FlyBase by the symbol Dmelpeb (CG12212, FBgn0003053). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is X:4617564..4627206. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription factor activity. It is involved in the biological process described with 20 unique terms, many of which group under: anatomical structure homeostasis; establishment of tissue polarity; cell-cell adhesion; regulation of cell adhesion; protein localization. 45 alleles are reported. The phenotypes of these alleles manifest in: plasma membrane bounded cell projection; stage 7 embryo; neuron projection; cell projection; rhabdomere. The phenotypic classes of alleles include: visible; partially lethal; phenotype; increased mortality. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages.
Coordinates
chrX:4617564-4627206:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000124782 | RREB1 | 1-to-1 |
Human | hg19 | ENSG00000124782 | RREB1 | 1-to-1 |
Mouse | mm10 | ENSMUSG00000039087 | Rreb1 | 1-to-1 |
Mouse | mm9 | ENSMUSG00000039087 | Rreb1 | 1-to-1 |
Cow | bosTau6 | ENSBTAG00000005980 | RREB1 | 1-to-1 |
Chicken | galGal4 | ENSGALG00000012799 | RREB1 | 1-to-1 |
Chicken | galGal3 | ENSGALG00000012799 | RREB1 | 1-to-1 |
Zebrafish | danRer10 | ENSDARG00000042652 | rreb1b | 1-to-2 |
Zebrafish | danRer10 | ENSDARG00000063701 | rreb1a | 1-to-2 |