Special

FBgn0003267 @ dm6

Biotype
protein_coding
Gene Symbol
ro
Description
The gene rough is referred to in FlyBase by the symbol Dmel o (CG6348, FBgn0003267). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3R:26876771..26881171. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding. It is involved in the biological process described with: R2/R5 cell fate commitment; R2/R5 cell differentiation; positive regulation of transcription by RNA polymerase II; establishment of ommatidial planar polarity. 75 alleles are reported. The phenotypes of these alleles manifest in: macrochaeta; pigment cell; photoreceptor cell R7; multi-tissue structure; chaeta. The phenotypic classes of alleles include: phenotype; increased mortality; increased mortality during development; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages.
Coordinates
chr3R:26876771-26881171:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)


Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000164900 GBX1 1-to-2
Human hg38 ENSG00000168505 GBX2 1-to-2
Human hg19 ENSG00000164900 GBX1 1-to-2
Human hg19 ENSG00000168505 GBX2 1-to-2
Mouse mm10 ENSMUSG00000034486 Gbx2 1-to-2
Mouse mm10 ENSMUSG00000067724 Gbx1 1-to-2
Mouse mm9 ENSMUSG00000034486 Gbx2 1-to-2
Mouse mm9 ENSMUSG00000067724 Gbx1 1-to-2
Cow bosTau6 ENSBTAG00000008898 GBX2 1-to-2
Cow bosTau6 ENSBTAG00000011120 GBX1 1-to-2
Chicken galGal4 ENSGALG00000013342 GBX2 1-to-2
Chicken galGal3 ENSGALG00000013342 F1NF97_CHICK 1-to-2
Zebrafish danRer10 ENSDARG00000002933 gbx2 1-to-2
Zebrafish danRer10 ENSDARG00000071418 gbx1 1-to-2