FBgn0003267 @ dm6
Biotype
protein_coding
Gene Symbol
ro
Description
The gene rough is referred to in FlyBase by the symbol Dmel
o (CG6348, FBgn0003267). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3R:26876771..26881171. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding. It is involved in the biological process described with: R2/R5 cell fate commitment; R2/R5 cell differentiation; positive regulation of transcription by RNA polymerase II; establishment of ommatidial planar polarity. 75 alleles are reported. The phenotypes of these alleles manifest in: macrochaeta; pigment cell; photoreceptor cell R7; multi-tissue structure; chaeta. The phenotypic classes of alleles include: phenotype; increased mortality; increased mortality during development; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages.
Coordinates
chr3R:26876771-26881171:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000164900 | GBX1 | 1-to-2 |
Human | hg38 | ENSG00000168505 | GBX2 | 1-to-2 |
Human | hg19 | ENSG00000164900 | GBX1 | 1-to-2 |
Human | hg19 | ENSG00000168505 | GBX2 | 1-to-2 |
Mouse | mm10 | ENSMUSG00000034486 | Gbx2 | 1-to-2 |
Mouse | mm10 | ENSMUSG00000067724 | Gbx1 | 1-to-2 |
Mouse | mm9 | ENSMUSG00000034486 | Gbx2 | 1-to-2 |
Mouse | mm9 | ENSMUSG00000067724 | Gbx1 | 1-to-2 |
Cow | bosTau6 | ENSBTAG00000008898 | GBX2 | 1-to-2 |
Cow | bosTau6 | ENSBTAG00000011120 | GBX1 | 1-to-2 |
Chicken | galGal4 | ENSGALG00000013342 | GBX2 | 1-to-2 |
Chicken | galGal3 | ENSGALG00000013342 | F1NF97_CHICK | 1-to-2 |
Zebrafish | danRer10 | ENSDARG00000002933 | gbx2 | 1-to-2 |
Zebrafish | danRer10 | ENSDARG00000071418 | gbx1 | 1-to-2 |