Special

FBgn0003888 @ dm6

Biotype
protein_coding
Gene Symbol
betaTub60D
Description
The gene beta-Tubulin at 60D is referred to in FlyBase by the symbol Dmel�etaTub60D (CG3401, FBgn0003888). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2R:24305881..24313099. Its molecular function is described by: GTPase activity; GTP binding; structural constituent of cytoskeleton. It is involved in the biological process described with 7 unique terms, many of which group under: cellular process; microtubule-based process; larval behavior; response to external stimulus; response to radiation. 28 alleles are reported. The phenotypes of these alleles manifest in: reproductive process; tergum; embryonic/larval peripheral nervous system; embryonic/larval midgut; developing material anatomical entity. The phenotypic classes of alleles include: locomotor behavior defective; phenotype; increased mortality; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 06-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period.
Coordinates
chr2R:24305881-24313099:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
38.5
49.75
0
Alternative 3'ss
3
chr2R:24310893-24310895
+
61.5
49.75
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Zebrafish danRer10 ENSDARG00000002344 tubb4b 3-to-3
Zebrafish danRer10 ENSDARG00000041723 TUBB4A (2 of 3) 3-to-3
Zebrafish danRer10 ENSDARG00000098591 tubb4b 3-to-3