FBgn0010258 @ dm6
Biotype
protein_coding
Gene Symbol
Rbp4
Description
The gene RNA-binding protein 4 is referred to in FlyBase by the symbol DmelRbp4 (CG9654, FBgn0010258). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 3R:13654556..13656394. Its molecular function is described by: single-stranded RNA binding; RNA binding; mRNA binding; mRNA 3'-UTR binding. It is involved in the biological process described with: mRNA processing; germ cell development; regulation of RNA metabolic process. 7 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: female fertile; male semi-fertile; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed during late larval stages, at stages throughout the pupal period, in adult male stages.
Coordinates
chr3R:13654556-13656394:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000122566 | HNRNPA2B1 | 4-to-5 |
| Human | hg38 | ENSG00000135486 | HNRNPA1 | 4-to-5 |
| Human | hg38 | ENSG00000139675 | HNRNPA1L2 | 4-to-5 |
| Human | hg38 | ENSG00000170144 | HNRNPA3 | 4-to-5 |
| Human | hg38 | ENSG00000177733 | HNRNPA0 | 4-to-5 |
| Human | hg19 | ENSG00000122566 | HNRNPA2B1 | 4-to-5 |
| Human | hg19 | ENSG00000135486 | HNRNPA1 | 4-to-5 |
| Human | hg19 | ENSG00000139675 | HNRNPA1L2 | 4-to-5 |
| Human | hg19 | ENSG00000170144 | HNRNPA3 | 4-to-5 |
| Human | hg19 | ENSG00000177733 | HNRNPA0 | 4-to-5 |
| Mouse | mm10 | ENSMUSG00000004980 | Hnrnpa2b1 | 4-to-7 |
| Mouse | mm10 | ENSMUSG00000007836 | Hnrnpa0 | 4-to-7 |
| Mouse | mm10 | ENSMUSG00000046434 | Hnrnpa1 | 4-to-7 |
| Mouse | mm10 | ENSMUSG00000092086 | Gm6793 | 4-to-7 |
| Mouse | mm9 | ENSMUSG00000004980 | Hnrnpa2b1 | 4-to-7 |
| Mouse | mm9 | ENSMUSG00000007836 | Hnrnpa0 | 4-to-7 |
| Mouse | mm9 | ENSMUSG00000046434 | Hnrnpa1 | 4-to-7 |
| Mouse | mm9 | ENSMUSG00000092086 | AC114648.1 | 4-to-7 |
| Cow | bosTau6 | ENSBTAG00000001553 | HNRNPA1 | 4-to-14 |
| Cow | bosTau6 | ENSBTAG00000009937 | 4-to-14 | |
| Cow | bosTau6 | ENSBTAG00000016929 | HNRPA0 | 4-to-14 |
| Cow | bosTau6 | ENSBTAG00000045772 | 4-to-14 | |
| Cow | bosTau6 | ENSBTAG00000047351 | 4-to-14 | |
| Chicken | galGal4 | ENSGALG00000006160 | HNRNPA0 | 4-to-4 |
| Chicken | galGal4 | ENSGALG00000009250 | HNRNPA3 | 4-to-4 |
| Chicken | galGal4 | ENSGALG00000011036 | HNRNPA2B1 | 4-to-4 |
| Chicken | galGal3 | ENSGALG00000006160 | HNRNPA0 | 4-to-4 |
| Chicken | galGal3 | ENSGALG00000009250 | HNRNPA3 | 4-to-4 |
| Chicken | galGal3 | ENSGALG00000011036 | Q5ZME1_CHICK | 4-to-4 |
| Zebrafish | danRer10 | ENSDARG00000011020 | hnrnpa1a | 4-to-6 |
| Zebrafish | danRer10 | ENSDARG00000036161 | hnrnpa0l | 4-to-6 |
| Zebrafish | danRer10 | ENSDARG00000036675 | hnrnpa1b | 4-to-6 |
| Zebrafish | danRer10 | ENSDARG00000059351 | hnrnpa3 | 4-to-6 |
| Zebrafish | danRer10 | ENSDARG00000089302 | hnrnpa0a | 4-to-6 |