Special

FBgn0019949 @ dm6

Biotype
protein_coding
Gene Symbol
Cdk9
Description
The gene Cyclin-dependent kinase 9 is referred to in FlyBase by the symbol DmelCdk9 (CG5179, FBgn0019949). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:22636063..22637727. Its molecular function is described by 6 unique terms, many of which group under: protein binding; catalytic activity, acting on a protein; heterocyclic compound binding; catalytic activity; phosphotransferase activity, alcohol group as acceptor. It is involved in the biological process described with 8 unique terms, many of which group under: response to stimulus; defense response to other organism; positive regulation of defense response to virus by host; response to temperature stimulus; regulation of defense response to virus. 23 alleles are reported. The phenotypes of these alleles manifest in: anatomical structure; multicellular structure; organism; material anatomical entity; somatic cell. The phenotypic classes of alleles include: phenotype; increased mortality; female semi-sterile; cell number defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period.
Coordinates
chr2R:22636063-22637727:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
258
chr2R:22636942-22637199
-
100
0
1
Intron Retention
59
chr2R:22637200-22637258
-
7.03
80.89
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136807 CDK9 1-to-1
Human hg19 ENSG00000136807 CDK9 1-to-1
Mouse mm10 ENSMUSG00000009555 Cdk9 1-to-1
Mouse mm9 ENSMUSG00000009555 Cdk9 1-to-1
Rat rn6 ENSRNOG00000022586 Cdk9 1-to-1
Cow bosTau6 ENSBTAG00000004695 CDK9 1-to-1
Zebrafish danRer10 ENSDARG00000044811 cdk9 1-to-1