Special

FBgn0027558 @ dm6

Biotype
protein_coding
Gene Symbol
pgant3
Description
The gene Polypeptide N-Acetylgalactosaminyltransferase 3 is referred to in FlyBase by the symbol DmelPgant3 (CG4445, FBgn0027558). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:7057654..7061732. Its molecular function is described by: acetylgalactosaminyltransferase activity; polypeptide N-acetylgalactosaminyltransferase activity; transferase activity, transferring glycosyl groups. It is involved in the biological process described with 6 unique terms, many of which group under: biological adhesion; cell adhesion; transport; regulation of cell adhesion; oligosaccharide biosynthetic process. 15 alleles are reported. The phenotypes of these alleles manifest in: wing disc; wing blade. The phenotypic classes of alleles include: lethal; viable; visible; partially lethal - majority die; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 12-18 embryonic stages.
Coordinates
chr2R:7057654-7061732:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
306
chr2R:7060917-7061222
-
10.7
44.26
0
Intron Retention
59
chr2R:7060224-7060282
-
4.37
92.31
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000005335 Galnt13 2-to-2
Rat rn6 ENSRNOG00000016207 Galnt1 2-to-2