Special

FBgn0030408 @ dm6

Biotype
protein_coding
Gene Symbol
CG11085
Description
This gene is referred to in FlyBase by the symbol DmelCG11085 (FBgn0030408). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is X:12616316..12621216. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific. It is involved in the biological process described with: regulation of transcription by RNA polymerase II; animal organ development. 6 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of no expression detected. Peak expression observed during late larval stages, at stages throughout the pupal period, in adult male stages.
Coordinates
chrX:12616316-12621216:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
455
chrX:12620214-12620668
+
6.82
25
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000125492 BARHL1 1-to-2
Human hg38 ENSG00000143032 BARHL2 1-to-2
Human hg19 ENSG00000125492 BARHL1 1-to-2
Human hg19 ENSG00000143032 BARHL2 1-to-2
Mouse mm10 ENSMUSG00000026805 Barhl1 1-to-2
Mouse mm10 ENSMUSG00000034384 Barhl2 1-to-2
Mouse mm9 ENSMUSG00000026805 Barhl1 1-to-2
Mouse mm9 ENSMUSG00000034384 Barhl2 1-to-2
Rat rn6 ENSRNOG00000002117 Barhl2 1-to-2
Rat rn6 ENSRNOG00000013209 Barhl1 1-to-2
Cow bosTau6 ENSBTAG00000005938 BARHL2 1-to-2
Cow bosTau6 ENSBTAG00000023801 BARHL1 1-to-2
Zebrafish danRer10 ENSDARG00000019013 barhl1b 1-to-3
Zebrafish danRer10 ENSDARG00000035508 barhl1a 1-to-3
Zebrafish danRer10 ENSDARG00000104361 barhl2 1-to-3