FBgn0030529 @ dm6

Biotype

protein_coding

Gene Symbol

Clic

Description

The gene Chloride intracellular channel is referred to in FlyBase by the symbol DmelClic (CG10997, FBgn0030529). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is X:13812971..13822307. Its molecular function is described by: chloride channel activity; lipid binding; calcium ion binding; glutathione peroxidase activity. It is involved in the biological process described with: negative gravitaxis; chloride transport; response to alcohol. 26 alleles are reported. The phenotype of these alleles manifest in: trichogen cell. The phenotypic classes of alleles include: lethal; viable; visible; partially lethal - majority die; fertile; locomotor behavior defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult female stages.

Coordinates

chrX:13812971-13822307:-

Assembly

dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Neural diversity
Neurogenesis
Neuronal activity
Splicing factor regulation (brain)
Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

DmeINT0018272

Intron Retention

69

chrX:13813806-13813874

-

4.86

71.65

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000112782	CLIC5	1-to-6
Human	hg38	ENSG00000155962	CLIC2	1-to-6
Human	hg38	ENSG00000159212	CLIC6	1-to-6
Human	hg38	ENSG00000169504	CLIC4	1-to-6
Human	hg38	ENSG00000169583	CLIC3	1-to-6
Human	hg19	ENSG00000112782	CLIC5	1-to-6
Human	hg19	ENSG00000155962	CLIC2	1-to-6
Human	hg19	ENSG00000159212	CLIC6	1-to-6
Human	hg19	ENSG00000169504	CLIC4	1-to-6
Human	hg19	ENSG00000169583	CLIC3	1-to-6
Mouse	mm10	ENSMUSG00000007041	Clic1	1-to-5
Mouse	mm10	ENSMUSG00000015093	Clic3	1-to-5
Mouse	mm10	ENSMUSG00000022949	Clic6	1-to-5
Mouse	mm10	ENSMUSG00000023959	Clic5	1-to-5
Mouse	mm10	ENSMUSG00000037242	Clic4	1-to-5
Mouse	mm9	ENSMUSG00000007041	Clic1	1-to-5
Mouse	mm9	ENSMUSG00000015093	Clic3	1-to-5
Mouse	mm9	ENSMUSG00000022949	Clic6	1-to-5
Mouse	mm9	ENSMUSG00000023959	Clic5	1-to-5
Mouse	mm9	ENSMUSG00000037242	Clic4	1-to-5
Rat	rn6	ENSRNOG00000000728	Clic2	1-to-6
Rat	rn6	ENSRNOG00000015184	Clic3	1-to-6
Rat	rn6	ENSRNOG00000018109	Clic4	1-to-6
Rat	rn6	ENSRNOG00000026870	Clic6	1-to-6
Rat	rn6	ENSRNOG00000047218	Clic5	1-to-6
Cow	bosTau6	ENSBTAG00000001753		1-to-7
Cow	bosTau6	ENSBTAG00000009470	CLIC4	1-to-7
Cow	bosTau6	ENSBTAG00000010244	CLIC5	1-to-7
Cow	bosTau6	ENSBTAG00000010948	CLIC2	1-to-7
Cow	bosTau6	ENSBTAG00000013533	CLIC1	1-to-7
Chicken	galGal4	ENSGALG00000001262	CLIC4	1-to-5
Chicken	galGal4	ENSGALG00000016020	CLIC6	1-to-5
Chicken	galGal4	ENSGALG00000016707	CLIC5	1-to-5
Chicken	galGal3	ENSGALG00000001262	CLIC4	1-to-5
Chicken	galGal3	ENSGALG00000016020	CLIC6	1-to-5
Chicken	galGal3	ENSGALG00000016707	CLIC5	1-to-5
Zebrafish	danRer10	ENSDARG00000010625	clic2	1-to-7
Zebrafish	danRer10	ENSDARG00000022995	clic4	1-to-7
Zebrafish	danRer10	ENSDARG00000044776	clic3	1-to-7
Zebrafish	danRer10	ENSDARG00000099108	CLIC6	1-to-7
Zebrafish	danRer10	ENSDARG00000103340	clic1	1-to-7