Special

FBgn0031495 @ dm6

Biotype
protein_coding
Gene Symbol
GABPI
Description
The gene beta4GalNAcTB pilot is referred to in FlyBase by the symbol DmelGABPI (CG17257, FBgn0031495). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (2 unique). Gene sequence location is 2L:3030539..3032300. Its molecular function is described by: protein-cysteine S-palmitoyltransferase activity. It is involved in the biological process described with: protein targeting to membrane; endoplasmic reticulum to Golgi vesicle-mediated transport; protein palmitoylation; peptidyl-L-cysteine S-palmitoylation. 9 alleles are reported. The phenotype of these alleles manifest in: wing. The phenotypic classes of alleles include: partially lethal; viable; lethal; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
Coordinates
chr2L:3030539-3032300:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
27
chr2L:3030776-3030802
+
65.73
90.57
0
Alternative 3'ss
133
chr2L:3030670-3030802
+
15.55
50
0
Alternative 3'ss
136
chr2L:3030667-3030802
+
17.57
54.72
0
Intron Retention
52
chr2L:3030948-3030999
+
4.15
77.78
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000184307 ZDHHC23 1-to-1
Human hg19 ENSG00000184307 ZDHHC23 1-to-1
Mouse mm10 ENSMUSG00000036304 Zdhhc23 1-to-1
Mouse mm9 ENSMUSG00000036304 Zdhhc23 1-to-1
Rat rn6 ENSRNOG00000015791 Zdhhc12 1-to-2
Rat rn6 ENSRNOG00000060348 Zdhhc23 1-to-2
Cow bosTau6 ENSBTAG00000004974 ZDHHC23 1-to-1
Chicken galGal4 ENSGALG00000015123 ZDHHC23 1-to-1
Chicken galGal3 ENSGALG00000015123 ZDHHC23 1-to-1
Zebrafish danRer10 ENSDARG00000003899 zdhhc23b 1-to-2
Zebrafish danRer10 ENSDARG00000029039 zdhhc23a 1-to-2