Special

FBgn0031573 @ dm6

Biotype
protein_coding
Gene Symbol
CG3407
Description
This gene is referred to in FlyBase by the symbol DmelCG3407 (FBgn0031573). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:3810801..3813410. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II. 7 alleles are reported. The phenotypes of these alleles manifest in: trichogen cell; mesothoracic tergum. The phenotypic classes of alleles include: some die during pupal stage; partially lethal - majority die; visible; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chr2L:3810801-3813410:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)


Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000171222 SCAND1 1-to-2
Human hg38 ENSG00000173275 ZNF449 1-to-2
Human hg19 ENSG00000171222 SCAND1 1-to-2
Human hg19 ENSG00000173275 ZNF449 1-to-2
Mouse mm10 ENSMUSG00000046229 Scand1 1-to-2
Mouse mm10 ENSMUSG00000073176 Zfp449 1-to-2
Mouse mm9 ENSMUSG00000046229 Scand1 1-to-2
Mouse mm9 ENSMUSG00000073176 Zfp449 1-to-2
Cow bosTau6 ENSBTAG00000005573 SCAND1 1-to-3
Cow bosTau6 ENSBTAG00000018090 ZNF449 1-to-3
Cow bosTau6 ENSBTAG00000040602 1-to-3