FBgn0031573 @ dm6
Biotype
protein_coding
Gene Symbol
CG3407
Description
This gene is referred to in FlyBase by the symbol DmelCG3407 (FBgn0031573). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2L:3810801..3813410. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II. 7 alleles are reported. The phenotypes of these alleles manifest in: trichogen cell; mesothoracic tergum. The phenotypic classes of alleles include: some die during pupal stage; partially lethal - majority die; visible; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chr2L:3810801-3813410:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000171222 | SCAND1 | 1-to-2 |
Human | hg38 | ENSG00000173275 | ZNF449 | 1-to-2 |
Human | hg19 | ENSG00000171222 | SCAND1 | 1-to-2 |
Human | hg19 | ENSG00000173275 | ZNF449 | 1-to-2 |
Mouse | mm10 | ENSMUSG00000046229 | Scand1 | 1-to-2 |
Mouse | mm10 | ENSMUSG00000073176 | Zfp449 | 1-to-2 |
Mouse | mm9 | ENSMUSG00000046229 | Scand1 | 1-to-2 |
Mouse | mm9 | ENSMUSG00000073176 | Zfp449 | 1-to-2 |
Cow | bosTau6 | ENSBTAG00000005573 | SCAND1 | 1-to-3 |
Cow | bosTau6 | ENSBTAG00000018090 | ZNF449 | 1-to-3 |
Cow | bosTau6 | ENSBTAG00000040602 | 1-to-3 |