Special

FBgn0031762 @ dm6

Biotype
protein_coding
Gene Symbol
CG9098
Description
This gene is referred to in FlyBase by the symbol DmelCG9098 (FBgn0031762). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is 2L:6007364..6012338. Its molecular function is described by: guanyl-nucleotide exchange factor activity; Ras guanyl-nucleotide exchange factor activity. It is involved in the biological process described with: small GTPase mediated signal transduction; positive regulation of peptidyl-serine phosphorylation; positive regulation of Ras protein signal transduction. 9 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: some die during pupal stage; lethal - all die before end of pupal stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 06-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period.
Coordinates
chr2L:6007364-6012338:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
13.37
19.52
0
Alternative 3'ss
11
chr2L:6011925-6011935
-
86.64
19.52
0
Intron Retention
67
chr2L:6012112-6012178
-
10.24
27.27
0
Intron Retention
50
chr2L:6011936-6011985
-
9.32
21.62
0
Intron Retention
56
chr2L:6011727-6011782
-
15.44
22.34
0
Intron Retention
252
chr2L:6008503-6008754
-
4.9
100
0
Intron Retention
58
chr2L:6008038-6008095
-
6.94
93.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000095370 SH2D3C 1-to-3
Human hg38 ENSG00000125731 SH2D3A 1-to-3
Human hg38 ENSG00000137936 BCAR3 1-to-3
Human hg19 ENSG00000095370 SH2D3C 1-to-3
Human hg19 ENSG00000125731 SH2D3A 1-to-3
Human hg19 ENSG00000137936 BCAR3 1-to-3
Mouse mm10 ENSMUSG00000028121 Bcar3 1-to-2
Mouse mm10 ENSMUSG00000059013 Sh2d3c 1-to-2
Mouse mm9 ENSMUSG00000028121 Bcar3 1-to-2
Mouse mm9 ENSMUSG00000059013 Sh2d3c 1-to-2
Rat rn6 ENSRNOG00000013737 Bcar3 1-to-2
Rat rn6 ENSRNOG00000054560 Sh2d3c 1-to-2
Cow bosTau6 ENSBTAG00000003245 BCAR3 1-to-3
Cow bosTau6 ENSBTAG00000013857 SH2D3A 1-to-3
Cow bosTau6 ENSBTAG00000015375 SH2D3C 1-to-3
Chicken galGal4 ENSGALG00000005036 SH2D3C 1-to-1
Chicken galGal3 ENSGALG00000005036 SH2D3C 1-to-1
Zebrafish danRer10 ENSDARG00000016981 bcar3 1-to-4
Zebrafish danRer10 ENSDARG00000028099 sh2d3ca 1-to-4
Zebrafish danRer10 ENSDARG00000086539 SH2D3A 1-to-4
Zebrafish danRer10 ENSDARG00000104555 sh2d3cb 1-to-4