Special

FBgn0032979 @ dm6

Biotype
protein_coding
Gene Symbol
Clamp
Description
The gene Chromatin-linked adaptor for MSL proteins is referred to in FlyBase by the symbol DmelClamp (CG1832, FBgn0032979). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2L:22165720..22169143. Its molecular function is described by: nucleic acid binding. The biological processes in which it is involved are not known. 17 alleles are reported. The phenotypes of these alleles manifest in: wing; polytene chromosome. The phenotypic classes of alleles include: viable; lethal; visible; some die during larval stage; developmental rate defective; lethal - all die before end of P-stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis.
Coordinates
chr2L:22165720-22169143:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
60
chr2L:22167179-22167238
-
75.13
61.54
0
Alternative 3'ss
75
chr2L:22167179-22167253
-
24.85
61.54
0
Intron Retention
53
chr2L:22168067-22168119
-
6.55
52.38
0
Intron Retention
60
chr2L:22167577-22167636
-
4.66
66.67
0
Intron Retention
64
chr2L:22167239-22167302
-
19.44
77.31
0
Intron Retention
62
chr2L:22166988-22167049
-
4.08
64.71
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000083812 ZNF324 1-to-4
Human hg38 ENSG00000249471 ZNF324B 1-to-4
Human hg19 ENSG00000083812 ZNF324 1-to-4
Human hg19 ENSG00000249471 ZNF324B 1-to-4
Mouse mm10 ENSMUSG00000004500 Zfp324 1-to-1
Mouse mm9 ENSMUSG00000004500 Zfp324 1-to-1
Rat rn6 ENSRNOG00000014552 LOC100909657 2-to-5
Rat rn6 ENSRNOG00000021705 LOC102556092 2-to-5
Rat rn6 ENSRNOG00000024376 Zfp111 2-to-5
Rat rn6 ENSRNOG00000029022 Zfp112 2-to-5
Rat rn6 ENSRNOG00000055608 LOC102548695 2-to-5
Cow bosTau6 ENSBTAG00000039453 1-to-1