Special

FBgn0034694 @ dm6

Biotype
protein_coding
Gene Symbol
CG6613
Description
The gene Pleckstrin homology and RUN domain containing M1 is referred to in FlyBase by the symbol DmelPlekhm1 (CG6613, FBgn0034694). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:22103177..22105963. Its molecular function is unknown. It is involved in the biological process described with: intracellular signal transduction. 5 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages, during late larval stages.
Coordinates
chr2R:22103177-22105963:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
60
chr2R:22103382-22103441
+
2.87
100
0
Intron Retention
135
chr2R:22103942-22104076
+
4.16
84.91
0
Intron Retention
53
chr2R:22104779-22104831
+
2.24
59.04
0
Intron Retention
56
chr2R:22104996-22105051
+
11.92
78.46
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000178385 PLEKHM3 1-to-2
Human hg38 ENSG00000225190 PLEKHM1 1-to-2
Human hg19 ENSG00000178385 PLEKHM3 1-to-2
Human hg19 ENSG00000225190 PLEKHM1 1-to-2
Mouse mm10 ENSMUSG00000034247 Plekhm1 1-to-2
Mouse mm10 ENSMUSG00000051344 Plekhm3 1-to-2
Mouse mm9 ENSMUSG00000034247 Plekhm1 1-to-2
Mouse mm9 ENSMUSG00000051344 Plekhm3 1-to-2
Rat rn6 ENSRNOG00000023760 Plekhm3 1-to-2
Rat rn6 ENSRNOG00000028521 Plekhm1 1-to-2
Cow bosTau6 ENSBTAG00000007830 PLEKHM3 1-to-2
Cow bosTau6 ENSBTAG00000020359 PLEKHM1 1-to-2
Chicken galGal4 ENSGALG00000000201 PLEKHM1 1-to-2
Chicken galGal4 ENSGALG00000008479 PLEKHM3 1-to-2
Chicken galGal3 ENSGALG00000000201 PLEKHM1 1-to-2
Chicken galGal3 ENSGALG00000008479 PLEKHM3 1-to-2
Zebrafish danRer10 ENSDARG00000030633 plekhm3 1-to-2
Zebrafish danRer10 ENSDARG00000099954 plekhm1 1-to-2