FBgn0034879 @ dm6
Biotype
protein_coding
Gene Symbol
Rrp4
Description
The gene Rrp4 is referred to in FlyBase by the symbol DmelRrp4 (CG3931, FBgn0034879). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 2R:23555018..23556217. Its molecular function is described by: RNA binding. It is involved in the biological process described with 11 unique terms, many of which group under: defense response to other organism; polyadenylation-dependent snoRNA 3'-end processing; nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; response to biotic stimulus; snRNA processing. 12 alleles are reported. The phenotypes of these alleles manifest in: mesothoracic tergum; trichogen cell. The phenotypic classes of alleles include: partially lethal; increased mortality; phenotype; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
Coordinates
chr2R:23555018-23556217:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000130713 | EXOSC2 | 1-to-1 |
| Human | hg19 | ENSG00000130713 | EXOSC2 | 1-to-1 |
| Mouse | mm10 | ENSMUSG00000039356 | Exosc2 | 1-to-1 |
| Mouse | mm9 | ENSMUSG00000039356 | Exosc2 | 1-to-1 |
| Rat | rn6 | ENSRNOG00000009245 | Exosc2 | 1-to-1 |
| Cow | bosTau6 | ENSBTAG00000048071 | EXOSC2 | 1-to-1 |
| Zebrafish | danRer10 | ENSDARG00000028688 | exosc2 | 1-to-1 |