FBgn0035676 @ dm6
Biotype
protein_coding
Gene Symbol
ssp6
Description
The gene short spindle 6 is referred to in FlyBase by the symbol Dmelssp6 (CG6619, FBgn0035676). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3L:6076722..6082491. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: partially lethal - majority die; some die during pupal stage; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-18 hour embryonic stages, at stages throughout the pupal period.
Coordinates
chr3L:6076722-6082491:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000115165 | CYTIP | 1-to-2 |
| Human | hg38 | ENSG00000161835 | GRASP | 1-to-2 |
| Human | hg19 | ENSG00000115165 | CYTIP | 1-to-2 |
| Human | hg19 | ENSG00000161835 | GRASP | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000000531 | Grasp | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000026832 | Cytip | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000000531 | Grasp | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000026832 | Cytip | 1-to-2 |
| Rat | rn6 | ENSRNOG00000004772 | Cytip | 1-to-2 |
| Rat | rn6 | ENSRNOG00000007346 | Grasp | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000008329 | CYTIP | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000021658 | GRASP | 1-to-2 |
| Chicken | galGal4 | ENSGALG00000012545 | CYTIP | 1-to-1 |
| Chicken | galGal3 | ENSGALG00000012545 | CYTIP | 1-to-1 |
| Zebrafish | danRer10 | ENSDARG00000000588 | grasp | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000061717 | CABZ01075242.1 | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000097743 | si:dkey-276j7.2 | 1-to-3 |