Special

FBgn0038244 @ dm6

Biotype
protein_coding
Gene Symbol
CG7987
Description
This gene is referred to in FlyBase by the symbol DmelCG7987 (FBgn0038244). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3R:14570472..14575887. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription repressor activity, RNA polymerase II-specific; sequence-specific DNA binding; RNA polymerase II regulatory region sequence-specific DNA binding. It is involved in the biological process described with: negative regulation of transcription by RNA polymerase II; regulation of transcription by RNA polymerase II. 12 alleles are reported. The phenotypes of these alleles manifest in: sarcomere; myofibril; Z disc; wing. The phenotypic classes of alleles include: viable; flightless; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chr3R:14570472-14575887:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
6
chr3R:14574880-14574885
-
68.98
61.29
0
Alternative 3'ss
180
chr3R:14574880-14575059
-
25.71
58.06
0
Intron Retention
885
chr3R:14574886-14575770
-
33.44
31.69
0
Intron Retention
91
chr3R:14573635-14573725
-
2.56
70.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000090963 Gm17655 1-to-1
Mouse mm9 ENSMUSG00000090963 AC166747.1 1-to-1
Rat rn6 ENSRNOG00000026115 Zfp646 1-to-3
Rat rn6 ENSRNOG00000029805 AABR07002774.2 1-to-3
Rat rn6 ENSRNOG00000049259 LOC102549842 1-to-3