Special

FBgn0039808 @ dm6

Biotype
protein_coding
Gene Symbol
CG12071
Description
This gene is referred to in FlyBase by the symbol DmelCG12071 (FBgn0039808). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (2 unique). Gene sequence location is 3R:30877084..30881027. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription repressor activity, RNA polymerase II-specific. It is involved in the biological process described with: negative regulation of transcription by RNA polymerase II; regulation of gene expression. 6 alleles are reported. No phenotypic data is available. No phenotypic class data is available. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages.
Coordinates
chr3R:30877084-30881027:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
856
chr3R:30879907-30880762
-
19.27
100
0
Intron Retention
78
chr3R:30879055-30879132
-
26.89
79.17
0
Intron Retention
110
chr3R:30878582-30878691
-
10.71
92.74
0
Intron Retention
149
chr3R:30877998-30878146
-
62.83
83.48
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000144792 ZNF660 1-to-3
Human hg38 ENSG00000169981 ZNF35 1-to-3
Human hg38 ENSG00000197062 ZSCAN26 1-to-3
Human hg19 ENSG00000144792 ZNF660 1-to-3
Human hg19 ENSG00000169981 ZNF35 1-to-3
Human hg19 ENSG00000197062 RP5-874C20.3 1-to-3
Mouse mm10 ENSMUSG00000022228 Zscan26 1-to-2
Mouse mm10 ENSMUSG00000057895 Zfp105 1-to-2
Mouse mm9 ENSMUSG00000022228 Zfp187 1-to-2
Mouse mm9 ENSMUSG00000057895 Zfp105 1-to-2
Rat rn6 ENSRNOG00000032919 Zfp105 1-to-2
Rat rn6 ENSRNOG00000053687 Znf660 1-to-2
Cow bosTau6 ENSBTAG00000031869 ZSCAN26 1-to-2
Cow bosTau6 ENSBTAG00000034005 ZNF35 1-to-2